Plectropomus leopardus (leopard coralgrouper): 121947843
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Entry
121947843 CDS
T07454
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04010
MAPK signaling pathway
plep04020
Calcium signaling pathway
plep04510
Focal adhesion
plep04518
Integrin signaling
plep04540
Gap junction
plep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121947843 (pdgfrb)
04020 Calcium signaling pathway
121947843 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
121947843 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121947843 (pdgfrb)
04540 Gap junction
121947843 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
121947843 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plep01001
]
121947843 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
plep04090
]
121947843 (pdgfrb)
Enzymes [BR:
plep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121947843 (pdgfrb)
Protein kinases [BR:
plep01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121947843 (pdgfrb)
CD molecules [BR:
plep04090
]
Proteins
121947843 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
Beta-prop_CGLA
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Haspin_kinase
Ig_VEGFR-1-like_5th
RIFIN
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
121947843
NCBI-ProteinID:
XP_042348927
LinkDB
All DBs
Position
9:complement(16087698..16120466)
Genome browser
AA seq
1104 aa
AA seq
DB search
MRRVMVSTLHLTVTVTAALLYFCSELCCLEITPDGTELVLAEGSSLTLTCSGSGDTIWEF
KRDDVPYIQVEQAQTGGQSYQIVQSSTTSSVLTLNNVSWKHTGVYQCVDRHTGDTKEVAV
FVPDPHVWFIESSHGMVTKTSEESTIPCVVTNPNINVTLYERDTDLPIRGLYVPSEGYKA
PLEDRTYVCRGELNEEVKESQAFYVFSIVVPEAIDAYINVSKTVLKQGEPLTVNCTVHGV
ELVFFSWDIPNREVIEVEPLTDVLSAMNMRSCLIFPRATIAHSGNYVCHVHEGVQDQSAS
ASVNITVLERGFVDVKAAQQQNISAKLQENVELRVEIEAYPPPQVHWSKDGVTIKGDKPI
APRQEHEIRYVTILTLVRVRTEQKGLYTVLITNGDDTKEVTFYLEVQVPSQIKDLTDHPL
SGKRHVVTCIAEGVPTPTIQWYSCDSMHKCSNQTAVWQPLIPEPEVLSIHTNVSYSKTRK
TSQVRSQVTFHKLQQVTVRCETSNQAGLVDRRDVKLVSSTLYSQVAVLAAVLALVAIIII
SIIILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMQRDNLVLGRTLG
SGAFGRVVEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNL
LGACTKHGPLYLVTEYCRYGDLVDYLHRNKHTLLQYYAEKNQDDSCLISRGSTPLSQRKG
YVSFGSESDGGYMDMSKDEPSLYVPMQEQMDTIKYADIQPSPYESPYQQDIYQEQGGGRL
DLAISDSSILTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLA
RDIMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLP
MNELFYSALKRGYRMAKPTHASDEVYEIMKKCWDEKFEKRPEFSFLVHSVGNMLTDSYKK
KYNQVNDNFLKSDHPAVARTKPRLSSPVPIANPAFGSPSPPYMPPDPYNQSLSPREFRQE
ADTQEIIPSYNEYIIPIPDPKPEDVFTEMPSESPASSLVLEEETDSMSQDTAETLPEEDR
LEETSERDALLGSSGTPEVEDSFL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggtgatggtgtctacgcttcatctgacagtcacagtgacagcagctctgctg
tatttctgctccgagctttgctgcctggagatcacacccgatggcacggagctcgtcctt
gctgagggctcctctctcaccctcacttgctccggctcgggggacacgatttgggaattc
aagagggacgatgtgccgtacatccaggtggaacaagctcaaactggtggtcaaagttac
caaatcgtgcaaagcagcaccacttccagtgttttgactttgaataatgtgagctggaag
cacactggggtgtatcagtgtgttgatcgacacactggagacactaaggaggtggctgtt
tttgtcccagaccctcatgtgtggtttatagagagctcccacggcatggtaacaaagacc
agtgaggagagcaccatcccctgtgtggtcaccaatcccaacatcaatgtcaccctgtat
gagagggacaccgatctgcccattagggggctttatgttcccagtgaggggtacaaggca
ccactggaggacaggacctacgtgtgccgtggagagctgaatgaggaggtgaaagagtct
caggccttctacgtcttcagcattgtcgtcccagaggccatcgacgcctacatcaatgtg
tcaaagaccgtgttgaagcagggcgaaccgctgacagtaaactgcacggtgcacggagtg
gagctggtgtttttttcctgggatatccccaacagagaggttattgaggttgagccgctg
acagacgtgctgtccgccatgaacatgcgctcctgcctgatcttccctcgtgccacgatc
gcccacagcggaaactacgtctgccacgtccacgagggtgtccaggaccagtctgcctct
gccagcgtcaacatcactgtgcttgaacgaggcttcgtggatgtgaaagctgctcagcaa
caaaacatttcagccaagctccaagagaacgtggagctgagagtggagattgaagcctac
cctccccctcaggtccactggagcaaagacggcgttaccatcaagggagacaaacccatc
gcacctagacaagaacatgagatcaggtatgtcaccattcttaccttggtgcgggtgagg
acggagcagaagggcctctacaccgtcctcatcacaaacggagatgacacaaaggaggtg
accttttacctggaggtccaagttccctctcagattaaagacctgactgaccaccccctg
tctgggaagaggcacgtggtgacctgcatagcagagggggtcccaaccccgaccatccag
tggtacagctgtgacagcatgcacaagtgtagcaaccagacagcagtgtggcaaccgctg
atcccagagccagaggtgctgagcatccacaccaatgtcagctacagcaagactcgtaaa
accagccaggtgcggagccaggtgaccttccacaagctccagcaggtcacagtgcgttgt
gagaccagcaaccaagcaggacttgttgacaggagagacgtcaaactggtgtccagcaca
ctgtactcccaggtggcagtgttggctgctgttctagccttagtggccatcatcatcata
tctatcatcatcctcattgctgtgtggaggaagaaacctcgttatgagatcagatggaag
gtgatcgagtctgtgagtcaggatggtcatgagtacatctatgtggaccccatccatctg
ccctatgacctggcctgggaaatgcagcgagacaacctggtgctgggtcgcactcttgga
tcaggagcctttggcagggtggtcgaggcaactgcgtatggtctcactcattcccagtcc
agcacaaaagtggctgtgaaaatgctgaaatccacagccaggaggagtgagactcaggct
ctgatgtcagagttgaagataatgagtcacctcggtcctcacctcaacatcgtcaacttg
ctgggagcttgtaccaaacacggccctctgtacctggtgaccgagtactgtcgctatggc
gatctggtggactacctgcacaggaacaagcacacgctgctgcagtactacgctgagaag
aaccaggatgacagctgtctcatctctagaggaagcactccgctaagccagaggaaaggc
tacgtttcttttgggagtgagagtgatggaggatacatggacatgagtaaagatgagccc
tcactctacgtgcccatgcaggagcagatggacaccatcaagtatgccgacatccagccc
tctccatacgagtctccctaccagcaggacatctatcaggaacaaggtggcggcagattg
gacctggccatcagtgactcttccattctcacctatgatgatctcttgggattcagctac
caagtggcgaagggaatggagtttcttgcctcaaagaattgtgtccatcgtgacctcgct
gccaggaatgtgttgatttgcgagggcaaactggtgaagatctgtgactttggcctagca
agagacatcatgcatgattccaactacatctctaaaggcagcaccttcctgcctctgaaa
tggatggcaccagaaagtattttccataacctgtacactaccctgagcgatgtttggtca
tacggcattcttctttgggagattttcacactgggaggaaccccttaccctgatttgccc
atgaatgagttgttctacagcgcattgaagagaggctaccgaatggccaaacccacccac
gcctctgatgaagtttatgaaataatgaagaagtgctgggatgagaagtttgagaagagg
cccgagttctccttcctggttcacagtgtgggaaatatgttgacagacagctataaaaag
aaatacaatcaagtcaacgacaacttcctgaagagtgaccacccagcagtcgcccgcacc
aaacccagactctcttcacccgttccgatcgccaacccagcattcggctccccatcccct
ccctacatgcccccggacccctataaccagagcctgagccccagagagttcagacaagag
gcagacacacaggaaatcataccttcatacaacgaatacatcattcctatcccagacccc
aagccggaggacgttttcactgaaatgccgtcagaaagccctgcaagctctctcgttctg
gaggaggagacagactccatgtcccaggacactgctgaaactctcccagaggaggacagg
ctggaggagacgagtgagagagacgctctgctgggttcttccggtacgcccgaggtagaa
gacagcttcttgtag
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