Plectropomus leopardus (leopard coralgrouper): 121953263
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Entry
121953263 CDS
T07454
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04115
p53 signaling pathway
plep04145
Phagosome
plep04148
Efferocytosis
plep04350
TGF-beta signaling pathway
plep04510
Focal adhesion
plep04512
ECM-receptor interaction
plep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121953263
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121953263
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121953263
04148 Efferocytosis
121953263
09143 Cell growth and death
04115 p53 signaling pathway
121953263
09144 Cellular community - eukaryotes
04510 Focal adhesion
121953263
09142 Cell motility
04820 Cytoskeleton in muscle cells
121953263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121953263
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
plep00536
]
121953263
Membrane trafficking [BR:
plep04131
]
Endocytosis
Phagocytosis
Opsonins
121953263
Glycosaminoglycan binding proteins [BR:
plep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121953263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_ADAMTS
EGF_CA
TSP1_CFP_C
cEGF
Laminin_G_3
EGF
TSP1_CCN
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
121953263
NCBI-ProteinID:
XP_042356184
LinkDB
All DBs
Position
14:complement(19425647..19434477)
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AA seq
1172 aa
AA seq
DB search
MMLCGIFLLLMLWSCEGARLAESRDDDSVFDLFELARVNKRHNGVSLVKGADPYSPAYKI
LNADLIPQVPDTYLRDLLDSIQAERGFLLLVNLKQFKKTRGSLLTIEKKDGSGPVFEIIS
NGKANTLDVVYSTSNQQQVVSIEDADLATGHWKNITLFVQDDRVQLYVGCEEINVSEMDL
PIQRVLSQEVADIAKLRIGKGAVRDRFMGVLQNVRFVFGTTLNAILRNKGCQNGATLTDV
MTLDNPVNGSSPAIRTDYTGHKAKDLQTVCGFSCEDIAGMFKELKGLGVVVKQLSNELRK
VSEDSTLLKTQMNIHSGICIHNGIVHKDKEEWTVDGCTECTCQNSATICRKISCPLIPCA
NATVPDGECCPRCGPPSDYAEDGWSAWSDWTHCSVTCGRGIQQRGRSCDRINSNCEGTSV
QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQLGGRDCQGEG
RQTEICQKSPCPINGGWGPWSPWDTCTVTCGGGVQNRKRLCSDPVPKYGGKDCVGDATMS
QVCNKQDCPIDGCLSNPCFPGAKCTSFPDGSFKCGKCPLGYTGNGITCKDIDECKEVPDA
CHTHNGVHRCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCH
KNANCIYLGVFSESMFRCECKPGYAGNGHICGEDSDLDGWPNTDLICVANATYHCKKDNC
PNLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPRVYNPAQYDADRDDVGDRCDNCV
FEANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL
EHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD
DNDGIPDDKDNCRLAYNPDQLDSDGDGRGDICKDDFDQDNVLDIYDVCPENFAISETDFR
RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR
DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN
ALWHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKSGLIRVVMYEGKRIMADSGNI
YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatctttttgctgttgatgctttggagctgtgaaggcgcaagattg
gcagagagtcgggatgatgacagtgtgtttgacttatttgagctggcccgggtaaacaag
agacacaacggtgtgagtttggtcaaaggtgcagatccttacagccctgcatataagatc
ctgaacgcagacctgatcccccaagtccccgacacctacctgagggacctcctcgactcc
atccaggctgagaggggcttcctcctccttgtcaacctgaagcaattcaagaaaaccagg
ggcagcctcctgaccattgagaagaaggatggatccggacctgttttcgagatcatctcc
aatgggaaggcgaatactctggatgtggtctactccacttcgaaccagcagcaggtcgtg
tccatcgaagatgctgatttggccaccggacactggaagaacatcacacttttcgttcag
gatgaccgggtgcagctttatgtcggctgtgaggagatcaatgtgtcggagatggatttg
ccgatccagagagtgctgtcccaggaggtggcggacatcgccaagctcaggattggaaag
ggtgctgtgagggacagattcatgggagtgcttcagaatgtgcgctttgtctttgggacc
actcttaatgccatactgagaaataagggatgtcagaatggagctaccttaactgatgtc
atgaccctggacaacccagttaatggctccagccctgctattaggactgattacaccggc
cacaaagccaaagacctgcaaactgtctgtggcttctcctgtgaggacatcgcaggcatg
tttaaggagctcaagggactcggcgtggtcgttaaacagctgtcaaacgagctccgcaaa
gtgtctgaggacagtacactgctgaaaactcaaatgaacatccacagtgggatctgcatc
cacaacggcatcgtgcacaaggacaaagaggaatggaccgttgacggctgcaccgagtgc
acctgccagaactctgctaccatttgtcgcaaaatctcctgccctctgatcccatgtgct
aacgccaccgtacctgatggagagtgctgccctcgctgtggaccaccgagcgactacgca
gaggatggctggtccgcctggtctgactggacccattgttctgtgacttgtggtcgcggc
atccagcagcgcggacgctcctgtgatcgcatcaacagcaactgtgagggcacctctgtc
cagacccgtgactgctacccccaggaatgtgataaacgcttcaaacaggatggcggttgg
agccactggtctccgtggtcttcttgctctgtgacctgtggtgagggggtcatcacccgg
atacgcctctgcaactctcccacaccccagttgggtggtagagactgccagggagaagga
cgtcaaactgaaatctgccaaaaatcaccctgccctatcaatggaggctggggtccttgg
tcaccatgggacacctgcactgttacatgcggtggtggagtccagaaccgcaaacgtctc
tgctccgaccccgtccccaaatatggaggaaaggattgtgttggtgatgcgactatgtct
caagtgtgcaacaaacaggattgccctattgatggttgtctctcaaacccctgcttccct
ggcgcaaagtgcaccagcttccccgatggctctttcaagtgcggcaagtgcccacttggc
tacactgggaacggcatcacctgcaaagacattgacgaatgtaaagaagttcccgatgct
tgccacacacacaacggagtccatcgctgtgagaacacagagccgggctacaactgcctc
ccctgccctgcacgtttctccggtcctcagccatttggaagaggagtggaacaggcaact
gctaaaaaacaggtttgcaaacctcgtaacccttgccaagatggcagccacgactgccat
aaaaatgcaaactgcatctacttgggcgtcttctccgagtccatgttccgttgcgagtgc
aagccagggtatgctgggaatggccatatctgcggagaggacagtgacctggatggttgg
cccaacactgacctcatctgtgtggcaaacgccacctatcactgcaagaaggataactgc
cccaaccttcctaactctggccaggaagatcacgacaaagatggcctgggtgatgaatgt
gaccatgatgatgacaatgatgggatccccgatgatagggacaactgcccaagagtgtac
aaccctgcccagtatgacgcagacagagatgacgttggcgaccgctgtgacaactgtgtg
ttcgaggctaacactgaccaaaccgacactgacaacaatggcgagggtgatgcctgtgct
gttgatattgatggcgatggtatcttgaatgagaacgacaactgtccatatgtttacaat
gtggaccagagagataccgacagggacggagttggagaccattgtgataactgtcctctg
gagcacaaccctgatcagatcgactctgactcggatcgcgtaggagacaagtgtgacaac
aaccaggacattgacgaggacggtcaccagaacaacttggacaactgcccctacataccc
aacgccaaccaggcagaccatgacaaggatggcaagggtgacgcctgtgaccatgatgat
gacaacgacggcattcctgatgacaaagacaattgtaggctggcatataaccctgatcag
ctggactctgatggtgatggccgtggtgatatatgcaaagatgattttgaccaagacaat
gttcttgacatctacgatgtgtgcccagagaactttgccatcagtgaaacagacttccgc
agattccagatggttcctctggatcccaagggcacctcccagatagatcccaactgggtg
gtccggcaccagggcaaggagttggtgcagaccgtcaactgcgatcctggcattgctgtt
ggttacgatgagttcagcgcggtggatttcagtggaacgttcttcatcaacacggacaga
gacgatgactacgccgggtttgtttttggctaccagtccagctcacgcttctacacagta
atgtggaaacagatcacacagacctactggtcccacacacctacaagagctcaaggctac
tctggcctgtcaatcaaagtggtcaactccaccaccgggcctggtgagcatctgaggaat
gccctgtggcacaccggagacactccaggacaggtgcgcactctgtggcacgaccccaag
aacattggctggaaggactttaccgcctacagatggcatctgacccacagacccaagagt
ggactcattagagtcgtcatgtatgaaggcaagagaatcatggctgattctggaaacatc
tacgacaagacctacgctggtggtcgattaggcttgtacgtcttctctcaggagatggtt
tacttctcagacctcaaatacgaatgcagagatacataa
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