Plectropomus leopardus (leopard coralgrouper): 121956810
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Entry
121956810 CDS
T07454
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121956810 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plep03041
]
121956810 (eftud2)
Spliceosome [BR:
plep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
121956810 (eftud2)
Complex C
U5 SnRNP specific factors
121956810 (eftud2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
121956810
NCBI-ProteinID:
XP_042361139
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All DBs
Position
17:complement(10718020..10737351)
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AA seq
971 aa
AA seq
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MEADLYDEFGNYIGPELDSDDDEDDLDAEDRDVDEGDEDDDDEPADADEDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNKQFTLMEQELPATVYDMEFLAD
LMDGPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRISDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHIPSPQEGARNKIEHTYTGGLDSDLGENMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatttgtatgatgagtttggaaactacatcggtccagagctggactctgat
gacgatgaagatgatttggatgcagaggacagggacgtcgacgagggggatgaagatgat
gatgatgagcccgctgatgctgatgaggatgtcccgggtatggaggtggtcctgcacgag
gacaagaagtactatccgacagcagaggaggtctatgggcctgaagtggaaactattgtc
caggaggaagacacacaaccactcacagagcctatcatcaagcctgtgaagaataagcag
ttcacactgatggagcaggagttacctgccactgtttatgatatggaatttcttgcagat
ctgatggacggtcctgagctaatccgtaacgtcacgctgtgtggtcaccttcaccacggc
aagacgtgttttgtggactgcctgattgaacagacgcacccagagatcaggaagagagat
gatgtggatctgcgatacacagacatcctctttacagagcaggagagaggagttggtatc
aagagcacccctgtcacaatggtactgcctgactccagaggcaaatcctacctttttaac
atcatggatacaccaggccacgtgaacttctctgacgaggtcacatccagcatccgaatc
tcagatggtgttgtcctcttcatagatgcagcagaaggagtgatgctgaacacagagcgt
ctgatcaaacatgcagttcaggagcgtatggccatcaccatctgcatcaacaaggtggac
cggctcattgtggagctcaaattgccccccacagatgcttattataaacttcgccacatt
gtggatgaggtcaatggtttactcagcacatactccacagatgagaacttggttgtgtct
cctctcctcggaaatgtgtgctttgccagctctcagtacagtatctgtttcactctgggg
tcctttgcaaagatctattcggacacatacggtgacatcaactacaatgagtttgccaag
aggctttggggagacatttatttcaaccccaaaacccgcaagttcacaaagaaagctccc
agcagtaactctcagcgcagctttgtggaatttgtcctggagcctctctacaagatcctc
tcacaggtggttggggatgtggacacgtctctccccagagttttggatgagctggggatc
cacctgactaaagaggaactgaagctgaacatcagacccttgctgaggctcgtctgtaac
cgcttctttggagagttcactggctttgtggacatgtgtgtgcagcacatcccctcacca
caggagggtgctaggaacaaaatagagcacacatacacaggaggtctggactcggacctg
ggggagaacatggcagagtgtgaccctgatggtcctttgatgtgtcacaccactaagatg
tacagcacagaggacggggttcagttccatgcgtttggcagggtgctgagcgggaccatt
caggcaggtcagcccgtcaaggttttaggagagaactacacccttgaagatgaggaggac
tcccaggtctgcactgtgggccgtctctggatttcagttgccagataccaaatagaagtg
aaccgagtgcctgcaggcaactgggtcctcattgaaggttgtgaccagccaattgtcaag
accgccacaatcacagagcccagagggaacgaagaggctcagattttcagaccgcttaag
ttcaacacagcatcagttataaagatcgcagtggagcccgtcaacccctcagagctaccg
aaaatgttggacggactgaggaaggtcaacaagagctatccgtcactcactacaaaggtg
gaggagtctggagagcacgtgatcttaggcacaggagagctctaccttgattgtgtcatg
catgacctgcgcaagatgtactctgagatcgacattaaagttgccgaccctgttgtgact
ttctgtgaaacggttgtggagacgtcgtcactgaagtgctttgctgaaacgccgaacaaa
aagaataagatcaccatgattgctgagcccttggagaaggggctggccgaggacatcgag
aacgaagtggtgcagatcacgtggaacaggaaaaaattgggggagtttttccagacaaaa
tacgactgggatctgctggccgccaggtccatctgggccttcggaccggacaccacggga
ccaaatatccttgtggatgacacactgccctctgaggtggacaaggcgctgctcggctca
gtcaaagacagcatcgttcagggcttccagtggggcaccagggagggacctctgtgtgat
gagcccatcaggaatgtcaagtttaagatccttgacgcagtcattgcgcaggagccgctc
cacagaggaggaggccaggtcatccctacagccaggagagtggtatactccgctttcctc
atggccactccaaggttgatggagccctattactttgtggaggttcaggctcctgctgat
tgtgtgtctgccgtctacacagtgctggctcgaaggaggggtcacgtcacccaggatgca
cctattccagggtctcctctctacaccataaaggcgttcatcccggccatcgactctttc
ggctttgagacagacctccgcacacacacacaggggcaggcctttgctctgtctgtgttc
caccactggcagatcgtccctggtgaccctctggacaagagtattgtgatcaggcctctt
gagcctcaacctgcccctcacctggccagagagttcatgatcaagacccgaaggcgcaag
ggtctgagcgaggatgtgagtatcagcaagttcttcgacgatcctatgttgttagagttg
gccaaacaggacgtggtccttaactaccccatgtaa
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