Plectropomus leopardus (leopard coralgrouper): 121958671
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Entry
121958671 CDS
T07454
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04620
Toll-like receptor signaling pathway
plep04621
NOD-like receptor signaling pathway
plep04622
RIG-I-like receptor signaling pathway
plep04623
Cytosolic DNA-sensing pathway
plep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121958671 (irf3)
04621 NOD-like receptor signaling pathway
121958671 (irf3)
04622 RIG-I-like receptor signaling pathway
121958671 (irf3)
04623 Cytosolic DNA-sensing pathway
121958671 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121958671 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121958671 (irf3)
04131 Membrane trafficking [BR:
plep04131
]
121958671 (irf3)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
121958671 (irf3)
Membrane trafficking [BR:
plep04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
121958671 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
121958671
NCBI-ProteinID:
XP_042363688
LinkDB
All DBs
Position
19:complement(15788523..15797469)
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AA seq
459 aa
AA seq
DB search
MSHSRPLLIPWLRAQIDSERYPGVHWTNPERTEFCVPWKHALRQDSSDVDILIFKAWAEV
SGNGRAHGDSSVWKRNFRSALRAKGFKMVSDSKNDSANPHKVFHWPDELASGANSSAGSQ
DQDDLNLLEDIGLPTPESHAIPCLDDLLYLPEDPSANQDILQKCLKGLNIGPEAEGTAGF
EPPPEQQQLQNAIVIGGHALPGQQQYPVTFEGAVGEAGLPEQPARPMEGAVGGACDGQLV
EQFLHTITKTSDGDTFKTQFRITVYYRGVKVSEQLVENEVGIRLVYRPELTGTVLDHDSG
LSVVSLPSPGVMLDQTQANLTQRILDRLEGLDVGVSGHVVYGQRWGESRAFWSFSKFDSS
RQPQEISKLQPQPLYQFKDFVRGILDFIDGRDCPPCSLFFCLGEKWPDPDNRPWEKKLIT
VEVVLTSMEVLKDMAVVGGASSLQSVELQMSLEEMMEMY
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattctagaccactgctcatcccgtggctgcgggcccagattgacagcgagagg
tatcccggtgtccactggacaaacccggagcgaacagagttctgtgtcccgtggaaacat
gctttaagacaggactcctctgacgttgacatcctcatctttaaggcctgggcagaagtg
agtggcaatgggcgggctcacggggactcgtcagtctggaaaaggaacttccgcagcgcc
ctccgagccaaaggcttcaaaatggtcagcgacagcaagaatgattctgctaacccccat
aaagtgtttcactggccggatgagctagcttcaggagctaactcttctgctggatcccag
gaccaagatgacctcaatttgcttgaggatatcggccttccaacaccagagagccatgcc
atcccatgcttagatgaccttctctatctgccagaagacccctctgccaaccaggatatt
ctccagaagtgtctgaagggactgaacattggccctgaagcagagggcaccgcaggcttt
gagcctcctcctgagcaacaacagctccaaaacgcgattgtgattggtggacatgcgttg
cctgggcaacagcagtatccagtaacgtttgagggtgcagtcggtgaagctgggttgcct
gagcaaccggcacgtccaatggagggagccgtgggaggggcctgtgatgggcagttggtg
gagcagttccttcataccatcaccaagaccagtgatggagatactttcaagactcagttc
aggataacagtgtactacagaggggtgaaggtgtctgagcagctggtggagaatgaagtg
ggaatccgcctagtttacaggcccgagctcactgggacagttttggatcacgactcaggc
ctgtcggtggtctctctgccaagtccaggagtcatgctggatcaaacccaagccaacctg
acccaacgcatcctggacaggctggagggtttggatgtgggtgtgtcgggccatgtggtg
tatggacagcgatggggtgaaagcagagcattttggagcttctccaagtttgacagcagc
agacagcctcaggagatttctaaactgcagcctcaaccgctgtaccagttcaaggatttt
gtgcgaggaatattggacttcattgatgggagagactgccctccctgctccctgttcttc
tgcctcggggagaagtggcctgacccagacaacaggccttgggagaagaaactcatcacg
gtggaggtggtcctgacttcaatggaggtactgaaggacatggctgttgtaggcggtgcc
tcctccctgcagtctgtggagctgcagatgtccctcgaagagatgatggagatgtactga
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