Phaethon lepturus (White-tailed tropicbird): 104616837
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Entry
104616837 CDS
T08325
Symbol
SPEN
Name
(RefSeq) LOW QUALITY PROTEIN: msx2-interacting protein
KO
K25100
Msx2-interacting protein
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104616837 (SPEN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plet03036
]
104616837 (SPEN)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
104616837 (SPEN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINT_MID
MINT_RID
SPOC
RRM_1
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
104616837
NCBI-ProteinID:
XP_010280282
LinkDB
All DBs
Position
Unknown
AA seq
3122 aa
AA seq
DB search
MQIEVTAWIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGG
IVDIDIKKVNGVPQYAFLXXXXXXXXXXDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPT
NCVWLDGLSTNVTDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKGRK
IGGNKIKVDFANRESQLAFYHSMEKTGQDIRDFYEMLAERSRDERRGSYEYAPDRTYYET
VRTPGTYPEDPRREYPARGREFYAEWDPYQGDYYDPRYYDDPREYRDYRGDPYEQDIREY
SYRQRERERERERFESDRDRDHERRPIERSQSPTHSRRPQSPGASPSQSERLQSDSERRI
YSRSSDRSGSCSSLSPPRYDKLDKARVERYAKNEKTEKERAFDQERVDKEKRLVRKEKPE
KLEKEKTDKQKRKAKIHSPSSQSSETDQENEREPSPEKLKGNSKQSKERGDKEGTAKNRL
ELMPCVVLTRVKEKEGKVIDQPSLEKLRAKLDNDTIKSPLLEQKTQTSQAEQTKSDQSKL
EPVRTKVQKEKALASHVEVVDKEGKMKPKKHLKTEQTSEGANAVDLDKLEARKRRFADAS
LKPERQKLEVKRSSQDEEDARMVLKKQLDATASSREATMLREGELERKPLRKEMLKRESK
KLKLERLIPVTSPKEIQETLNVGGIGMRPTLDLQARLMEAADEPVEVQELSSKKLNPVKP
QHKQVQLLDDQGTEREDARKNYSGLPEDTPDHKLGQEKPQSTDAEEKIGIDIDHTQSYRK
QMEQSRRLKQQLEMEIAKSEKFGSPKKDVDEYERRSLVHEVGKPPQDVTDDSPPSKRKKT
DQFDFEISTKRERNYRSSRQVSEDSERTSCSPSIRHFPFHEDEDTLDSPRLMPLKETKES
PKIEEKGLSYSNMTVREDSLKFNPYDSSRREQMAEMAKIKLSVLSSEDDSSRWETQVKQE
PGRVDISFPSSIVKRDSIRKRSVRDLEPGEVPSDSDDDSENKPHSPKASSLLESSRLSFL
LRDREEKLREREERLSSSLERNKFYSFALDKTITPDTKALLERAKSLSSSREENWSFLDW
DSRFASFRNNKDKEKVDSAPRPIPSWYMKKKKIRTDSEGGKLDDKKEDHKEEEQERQELF
ASRFLHSSIFEQDSKRLQHLEKKDDDLDFISGRLYGRQSSSDGTNSAADLVQEPVVLFHS
RFIELTRMQQKEKEKDQKPKEVEKQEDKENRPKTPETVPDNKEPEHKTSSVVGPSSVAVV
PQEPSPVASEKVANEKVVVETASVKEEKPSEPASTAEEPKPFPEVAAPVKIEPPEQTEPP
PVVEASKEVVATILAPEEDAVATEHPSYLDTKPPTPGASFSQGDSVDPEPEGAQLIPPPL
KVVQKSDEAAEPKEENPPPSANADASASQKVEAAAEVLPPVSDNDMEVEPPVVVKDKKSY
KSKRSKTPVQSAAANVTEKPVTRKSERIDREKLKRSSSPRGEMQKLSELKVEAEKVSRNA
AKSPSSAAEPENVEPSLPIGRTRRRNVRSVYATTGDNEGPSPVKDSVEVTRSTRKRGEKE
PQDTVTTVPTTPRRGRPPKTRRKPEEDVSPIKTEPVQQETEDTESKDAAEAPKPAEGWRS
PRSQKLTHGHSSAAASQQGKKGKNEPKADTSAEAEDAAERSGQESSVSDNSNKTKVTERE
TAVSEQKRDRKDLDQEKNQLEIPTVEIIEKKTAPEKVTKSKRGRYKNTKTVVDKASVCLK
NVEIRLNVDEVKGALRPTEEEAEPVALSPAKMKSPQKEDILPPHFAKNEMEDPFPETEKE
VMREPKQSPEAAQLAKQIELEQAVENIAKLTETPPSIAAYKEPTADVPEVRQEEEGDKPA
HQASETELAAAIGSIINDISGETESFPAPAGVQPVPGSTPSAVETESKEAEVSFSESSNS
AQEAETLQEAEVARKEKGRQKTTRQRRKRSTSRKGDAAEVNAFEPERVQSKSPPANEVKT
KPEEASKEEKQTKTTAQESVEPSASDASKAAAADVVAVHEADAERSTSPKAPTPAPLDQA
APPVPLDEGSQSGFKIRSPIENAPITPPSAPNAALPAVTTAAAVANAAPLQKLPLQLLWT
RLPHHSGSGXTVRHEEPRAHSTPPPALPPDTKASDIDTNSSTLRKILMEPKYVSATSITS
THVTTTHAEPVSAPRLDEAPLHPAVEAIKPVSEEKPAVPVTNALDPPVAEAPVFSEKEKI
STVIAPKATSVISRMPHSVDLEEAPRITLVKQAPQTQTCLVNAPSPKFKQRSSTNDNSRF
HPGSMSIIEERPVETGSSPGLRVNTSEGVVLLSYSGQKTEGPQRISAKISQIPPASAVDI
EFQQSVSKSQIKQEPITPSQPTPKGSQTSAGYGTVSTHSSLVLGTQPYNTSPVISSVKQE
RTALEKSDSSHLSVQTPASQAGKVLTQTVNTPPVLVHNQMVVNKKLSDPAALKVETKTLQ
PSNLSPGVSPHHPSLSGKMHSEANHVSSGPSTPTDRAISHLGVTKQEPHSPRTSGHSPSP
FPRACHPGSTSSPALSSSTPVMLAPGIPVPQYISSMHPEQSVIMPPHSVTQTVSLGHLSQ
GEVRMNTPPLSGIPYGIRPEALHSPRAALQPQIEIKPQRSSTPQPAPIRDIVMPPLSSQH
ASEEEMHYHHTTVCRGPAPVQSDVLVMQPDYRMHPTSIRLDQYNVPRDVRMIMHPHMAAV
GEHHSETRQSRTPEGAGKTPPVSKTPQPGKETPKSSEGKMAHSPHSEPRLLSVPSSSQLP
GLPLTQPVVVPHGVQIMHPAGSSFHDYRSVYGDMRNYHTAAQLGHPQFPGASPMGLPSRS
MTPSQGLPEGGHXRXXXXXXXXXXPQDPKGPPAAGAEQSHHPTVNRHAAPIDPHVHLQRA
QADTGQTSYPSPVAISMKQELPSPHQPQAVPKQSMFIPTTSGPGAPPGLPLNRPEPQSAL
KQEPSPHPVSQRPVDMVQLLTKYPIVWQGLLALKNDTAAVQLHFVSGNNVLAHRSLPAPE
GGPPLRIAQRMRLEASQLEGVARRMMVESDYCLLLALPCGRDQEDVVNQTESLKAAFISY
LQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLASISNISPHLMIVIA
SV
NT seq
9369 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgaagtcacggcctggataggaccagaaacagaaagcgagaatgaatttcgt
cctttggatgaaaggatagatgagtttcaccccaaagcaacaagaactctcttcatcggc
aacctggagaaaacaaccacctaccacgaccttcgcaacatctttcagcgctttggtgga
atagtggatattgacatcaagaaagtgaacggtgttcctcagtatgcattcctnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnngatattgcaagtgtgtgtaaagcaattaagaagatg
gatggggaatatcttggaaataaccggctcaagctgggttttggaaagagcatgcctaca
aactgcgtgtggttagatggtctttctacaaacgttacggatcagtatttaactcgacat
ttctgccgatacgggcctgtggtaaaggtggtgtttgaccgcttaaaaggcatggccctg
gttctctacaatgagattgaatatgcacaagcagctgtaaaagagaccaaggggaggaaa
atcggtgggaataaaattaaggtggattttgcaaatcgagaaagtcagttggcgttttat
cattccatggagaaaacgggtcaagatatcagagacttctatgaaatgctggcagaaaga
agcagagatgaaagaagaggatcttatgaatatgcccctgatcgtacttactatgagact
gttcggactccagggacatatcctgaagatcctcggcgagagtacccagctcgaggcaga
gaattttacgctgagtgggatccctaccaaggagactactatgacccacgatactacgac
gacccacgcgagtacagggattacagaggcgacccgtacgagcaagacataagggagtac
agttacaggcaacgggagagagagagggagagggaacgttttgaatccgatcgggacaga
gaccacgaacggagaccgattgaacggagccagagtccgacgcactccaggcgtccgcag
agccctggagcgtctccctcccagtcggaaaggctgcagagcgattcggagaggaggatt
tacagcaggtcatcggatcgcagtggcagctgcagctctctgtctcctccacgatacgac
aagcttgacaaagcccgtgtggaacgttacgcaaaaaatgaaaaaacggagaaggagcgt
gcttttgaccaggagagagtcgacaaggagaaacgcttggtgagaaaggaaaagccagaa
aaactagaaaaggagaaaaccgacaagcaaaaacgaaaagcaaaaatccattcgcccagc
tctcagtcttctgaaacggatcaagagaatgagagagagcccagccctgaaaaattgaag
ggcaacagtaaacaaagtaaagagagaggtgacaaagaagggacagctaaaaaccgcctg
gaattaatgccctgtgtcgtgttgacccgagtgaaagaaaaggaagggaaagttattgat
cagccctctttggagaaactgagagcaaagctcgataatgatactataaaatccccgctt
cttgaacaaaaaacacagacatctcaagctgagcaaaccaagtctgatcagtctaaactg
gaacctgtcagaaccaaggtacaaaaagagaaagcccttgccagtcacgtagaagtggtg
gataaggagggaaagatgaaacccaaaaagcacttgaagacggagcaaacttccgagggg
gctaacgcggtagatttagacaagttggaggctcgtaaaagacgttttgccgatgcaagt
ctgaagcctgagaggcaaaaactggaagtaaaaagaagcagccaagatgaggaggatgca
cgcatggttttgaaaaagcagcttgatgcaacggcttcatctagagaagcaaccatgtta
agggaaggggaattagagaggaaacccctgaggaaggagatgcttaaaagggaatctaaa
aaactcaaactggaaaggcttattcctgttactagccccaaagaaattcaagagactctt
aacgttggtgggattggcatgcgtcccaccctggatctgcaggcaaggctaatggaggca
gctgatgaaccagtggaagttcaggaactctcttctaaaaaactgaacccagtaaaaccc
cagcataaacaggtacagctactagacgaccaaggaacagagagagaggacgcaaggaag
aattactctggtcttcctgaagacacacctgaccataaacttggccaagagaaacctcag
tcaactgatgcagaggagaaaattggcattgacattgaccacacgcaaagctacaggaaa
caaatggagcaaagtcgcaggttaaaacagcagctggaaatggagatagcgaagtctgag
aagttcggcagtccaaagaaagatgtggatgagtatgaaagacggagcttggtccacgag
gtgggaaaacctccgcaagatgtcaccgatgactctcccccaagcaaaaggaaaaagact
gaccagtttgacttcgaaattagcactaaaagagaaagaaactacagaagttctcgtcag
gtgagtgaggactccgaaaggacgtcctgttcccctagtatcagacacttccctttccac
gaagatgaagacacgctcgattctccgaggctaatgccattaaaggaaaccaaagagtca
cctaaaatagaagaaaagggtctttcgtactccaacatgactgtgagggaagactctctg
aaatttaatccttatgattccagcagaagggagcagatggcagaaatggctaaaataaaa
ctatctgtactgagttctgaagatgactcgagtaggtgggaaacacaagtgaagcaggag
cctggtagagttgatatcagctttccaagcagcattgtcaaaagagacagcatacgcaag
cggtctgtccgagacctggaacccggggaggtgccgtcagattcggatgacgacagtgaa
aacaagccccattccccgaaagcctcgtccttgttagagagttccaggttgtctttttta
ttaagggacagagaagagaagttacgtgaaagagaggagagactgtcgagttccttagaa
agaaataaattttattcttttgcgttggacaagacaatcacaccagacacaaaggccttg
cttgaaagagctaaatctctctcttcctccagagaagaaaactggtcctttctagattgg
gattcaagatttgctagttttagaaacaataaagataaagagaaggttgactcagctccg
agacctattccatcttggtatatgaaaaagaaaaaaatcaggaccgattcagaaggtgga
aaactggatgataagaaagaagatcataaagaggaggaacaagagagacaggaactgttt
gcttctcgttttttgcatagttcaatctttgaacaagactccaagcgcctgcagcattta
gagaaaaaagacgacgatcttgacttcatttctggtagattgtatgggagacagtcttcc
tccgatgggacgaacagcgcggctgatttggtgcaagaaccggtggttctcttccacagt
agatttattgaactaacgcgaatgcagcagaaagaaaaagagaaagatcagaaaccaaaa
gaagtggaaaagcaggaagataaagaaaaccggccgaaaacaccagaaacggttcctgat
aataaagaaccagaacataaaacttcctcagtggttggtccctcttcggttgctgtcgta
ccacaggaaccatcaccagttgcttctgagaaggtagcaaacgaaaaggtagtggtggaa
acagcttctgtaaaagaagaaaaaccgtctgaacctgcttctacagcagaggaaccaaaa
ccttttcctgaagttgctgctcctgtcaaaatcgaaccacccgagcaaactgaacccccg
ccagtcgtagaagctagtaaagaagttgttgctacaatcctggcaccagaggaagacgct
gtggccacagagcatccttcatacttggataccaagcctcctactcccggagcttcgttt
tcccaaggagacagtgtagatccagaacctgaaggtgcccaattgattccacctccgctc
aaggtcgttcagaagtccgatgaggctgctgagcctaaagaagaaaatcctccaccttct
gccaacgctgatgctagcgcgagtcaaaaggtggaggcggctgctgaggtcctgccacct
gtttccgacaatgatatggaagtcgaacctccagttgttgtgaaagataaaaagtcctac
aagagtaaacgctccaagacacctgtgcagtcggctgcagctaacgtcacggaaaagccc
gttacgaggaagagcgaaagaattgaccgtgaaaaactcaaaaggtcgagctctcctcgt
ggggagatgcagaagctttccgaattgaaagtggaggcggagaaggtttcgaggaacgct
gctaaatcccctagttctgctgcagagccagaaaacgtggagccaagcttgccaataggc
cggactaggcgcagaaatgtaaggtcagtctacgctaccacgggcgacaatgaaggacca
tctccggtgaaggactctgtggaggtcactagatccaccaggaagagaggggaaaaggaa
ccacaggacactgtgacaaccgttcctacgaccccgaggaggggaagacctccgaaaacc
cgccgtaagccggaggaggatgtctctccaataaagacagaaccggtacagcaagagacg
gaggacactgaaagtaaagatgctgcggaagctcctaagcctgcagaaggttggaggtct
cctagatcccagaagctaacacacggtcactcatcagctgctgccagccaacaggggaag
aaagggaagaacgaaccgaaagctgatacctcggctgaagctgaagatgctgctgaaaga
agcggccaggaatcgagcgtcagtgacaacagcaataaaacaaaagtgactgagagagag
acggcagtgagcgagcagaaacgcgataggaaggacctggatcaagagaagaaccagcta
gaaatccccacggttgagatcattgagaaaaaaacagcaccagaaaaggttacgaaatcc
aaaaggggaaggtataaaaataccaaaactgtcgtagataaagcatccgtgtgtctcaaa
aatgtagaaatacgcctcaacgtggacgaagtcaagggcgccttgcggccgactgaggag
gaggcagagccagtggcgttgtcaccggccaaaatgaagagcccccagaaagaggacatc
ttgccaccccattttgctaagaatgagatggaagatccattccccgaaacagaaaaagag
gtgatgcgggagccaaagcagtcccctgaagctgcccaattagcaaaacagattgaactt
gaacaggccgtggagaatattgcaaaactcaccgaaactcctccgtcaattgctgcctac
aaagagccgacggcagacgtgcctgaagttcgtcaggaggaggaaggagataaacctgcg
catcaggccagtgaaacggagctggcagcggccatcggctccatcatcaatgatatttct
ggggagacagagagctttcctgcacccgctggggtccagccggttcccggctctacccca
tcggcagtagagacggagagcaaggaggccgaagtcagcttcagcgaatcttccaactct
gcacaggaggctgagaccttgcaggaggctgaagttgctcggaaggaaaagggccgtcag
aaaactacacggcagagacgcaaaaggagcacgagcagaaagggtgatgctgctgaagtc
aacgcctttgagccggagagggtacagagcaagtcgccccccgccaatgaagtaaagaca
aaacctgaagaggcctcaaaggaggaaaagcaaactaaaaccacagctcaggagtccgtg
gagccaagtgcctccgatgccagcaaggctgcagccgctgacgtcgtggccgtgcacgaa
gccgatgctgaacgcagcacctctccaaaagctcccactccagctcctctggaccaggct
gccccaccagttcccctcgacgaggggagtcagagtgggttcaagatacggtcgcccata
gagaacgcgcccatcacgccgccgagcgccccaaacgcagcccttcccgctgtcactaca
gcagcggcagtggctaacgcagcacctctccaaaagctcccactccagctcctctggacc
aggctgccccaccacagcggcagtggctaaaccgtaaggcacgaggaaccccgtgcccat
tccacacccccgcctgctctcccaccagacacaaaggcatcagatatcgatacaaactcc
agcactttgaggaagatactcatggagcccaagtacgtctcggcaacgagcataacctcc
acgcacgtgacgacgacgcacgctgagccagtgagtgcgcctcgtttggatgaggcaccc
ctccatcctgcagtagaggccataaaaccagtttcggaggagaagccagcagtccccgtc
accaatgccttggaccctccggtggctgaagcaccggtgttcagcgagaaggaaaagata
agtaccgtgattgctcccaaagctacttctgttataagcaggatgccccacagcgtggat
ctggaggaggctccaaggatcaccttggtgaagcaagctccccaaacccagacgtgtctt
gtcaacgccccctcgccaaaatttaagcagaggtcgagcacaaatgataacagtaggttt
catccgggatcgatgtctattatcgaggagaggcctgtggagactgggtccagtccaggg
ctgcgggtgaacacctcggaaggtgtagtgcttctgagttactcagggcagaagacggaa
ggccctcagcgaattagtgccaagatcagccagattcccccagccagtgctgtcgacata
gagtttcagcagtctgtatccaagtctcagattaaacaggaacctatcacgccatctcag
ccgacgccaaaaggctcccagacctcggcgggctacgggactgtttccacccattcttct
ttggtactaggaacccaaccttacaatacgtcgcctgtcatctcctctgttaaacaagag
cgcactgcgctggagaagtccgactcgtcccacctttctgtccagactccggcatctcag
gccggtaaagtcctcacacagactgtaaacactccacccgtactcgtccacaaccaaatg
gttgtgaataaaaaactgtccgatccagctgctctgaaagtggagaccaagaccctgcaa
ccctccaacttgagtcctggagtcagtcctcaccacccttccctctctgggaaaatgcat
tcggaagcaaaccacgtcagctcgggacccagcaccccaaccgaccgggctatttcccac
ttgggggtcaccaaacaggagccgcactcaccacgtactagcgggcactcaccgtcgccg
ttcccccgggcttgtcatcctggtagtacctcgtctccagctttatcgagcagtaccccg
gtcatgttggcgccgggaattcccgttcctcagtacatatccagcatgcatcccgagcaa
tctgttatcatgccccctcacagcgtaacacagactgtgtccctgggccatctgtcccaa
ggcgaggtgaggatgaacacccctcctctctccggcatcccttacggcatccgcccagaa
gcgctccactcccccagagctgctctgcaaccccagatagagatcaaacctcagcgatcc
agcacgccccagccagctccgatacgggacatagtcatgccgcctctgtcttctcagcat
gcctccgaggaggagatgcactaccaccacaccacggtgtgcaggggaccggcccccgtt
cagtcggatgtgctggtgatgcagccagattaccgcatgcaccccacgagcatcaggctc
gaccagtacaacgtcccccgggatgtgaggatgatcatgcacccgcacatggccgccgtg
ggcgaacaccactcggaaacgagacaatcccgaacgcctgaaggggctgggaaaactccc
cctgtcagtaagaccccgcagcccggaaaagagacgccaaaatcctccgaaggcaagatg
gcacactctcctcacagcgagccccggctcctcagcgtcccctccagcagccagctgcct
ggactgcctttgacgcagccggtggtggtaccgcacggggtacagatcatgcaccccgcg
gggagctcctttcacgattatcggtctgtgtatggcgacatgaggaattaccatacggcg
gcacagctcgggcatcctcagttcccgggtgcctcgccaatggggttgccttcccggagc
atgaccccatctcagggtctaccggagggcggacactagcgacnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnccccaggatcccaagggcccgccggcagcaggagccgaacagagtcac
caccccactgtaaataggcacgccgcaccgatagaccctcacgtccaccttcagagggca
caggcagacacgggccagacctcctacccttcacccgttgccatttcgatgaaacaggag
cttccgtcaccgcaccaacctcaggcggttcccaagcaatccatgtttatccccacgaca
tcggggcctggggccccgccagggctgcccctcaatcgccctgagccccagtccgctctc
aaacaagagccgtctcctcaccccgtttcgcagagacctgtggatatggttcagcttctg
acaaaatacccgattgtctggcagggccttttggctctaaaaaatgacacagccgccgtt
cagctccacttcgtctctggtaataacgtcttggcgcaccggtccctgccggcgccggag
ggaggaccgccgctgagaatcgctcagcgcatgcgactggaggcttcgcaactggagggt
gtcgcgcgcagaatgatggtggagagcgattactgcctattactggccttgccttgtggc
cgagaccaggaagacgtagtgaatcagactgagtcacttaaggctgcgttcatcagctac
ctgcaggctaagcaagctgcaggaatcatcaacgttcccaaccccggctctaaccagcct
gcctacgttctgcagatcttcccaccctgcgaattttcagaaagccacctgtcccgcctc
gccccggacctcctcgccagcatctccaacatctctcctcacctgatgattgtcatcgcg
tcggtatga
DBGET
integrated database retrieval system
