Phaethon lepturus (White-tailed tropicbird): 104618120
Help
Entry
104618120 CDS
T08325
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04010
MAPK signaling pathway
plet04120
Ubiquitin mediated proteolysis
plet04140
Autophagy - animal
plet04144
Endocytosis
plet04620
Toll-like receptor signaling pathway
plet04621
NOD-like receptor signaling pathway
plet04622
RIG-I-like receptor signaling pathway
plet05132
Salmonella infection
plet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104618120 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104618120 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104618120 (TRAF6)
04140 Autophagy - animal
104618120 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104618120 (TRAF6)
04621 NOD-like receptor signaling pathway
104618120 (TRAF6)
04622 RIG-I-like receptor signaling pathway
104618120 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104618120 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
104618120 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plet04131
]
104618120 (TRAF6)
04121 Ubiquitin system [BR:
plet04121
]
104618120 (TRAF6)
Enzymes [BR:
plet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104618120 (TRAF6)
Membrane trafficking [BR:
plet04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104618120 (TRAF6)
Ubiquitin system [BR:
plet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
104618120 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
SlyX
Sina_ZnF
PspA_IM30
Med21
RING_XB3-XBAT31
TRAF3_RING
TSC22
zf-RING_11
CENP-F_leu_zip
ATG16
DUF4455
HAP1_N
DUF2730
Spc29
CEP104_ZnF
U-box
DUF1664
UPF0242
TMF_TATA_bd
DUF16
HMMR_N
RNase_Y_N
DUF7607
DM
ADIP
AAA_13
Motif
Other DBs
NCBI-GeneID:
104618120
NCBI-ProteinID:
XP_010281941
UniProt:
A0A091TDT5
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSLLYSDNSCGARDVESGCCAAMASACSVGVKEDSVSVSSGTGNPPSSFTEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNKGCSMKMELRHLEDHQLQCDFSTVECPQCQGAFQKNHLKEHMTQ
ECPRRHVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPAL
FSHVSHATYDCNSEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL
EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL
AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFIKDDTLLVRCEVLTRLDLNSLRREGFQARS
TDGAM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctatatagtgataacagttgtggagcccgagacgtggaaagtggctgctgt
gcagccatggccagtgcctgcagtgttggagtgaaagaagacagcgtaagcgtcagcagt
gggactggaaaccctccaagttctttcacagaggaaacacaaggatatgatgtggagttt
gatccgcccttggaaagtaaatatgaatgtccaatctgtttgatggctcttcgggaagca
gtgcagacaccttgtggacaccgtttctgcaaaggctgcattgtcaaatcaataagagat
gcaggtcacaaatgtccagtagacaatgaaattctgcttgaaaaccaactttttcctgac
aactttgctaaacgggaaatcctttcattaatggttaagtgtcccaacaagggctgcagt
atgaagatggagctaaggcatttagaggaccaccagttgcagtgtgatttttccactgtg
gaatgcccacagtgccaaggagccttccagaagaaccatctgaaagagcatatgacacag
gagtgtccaaggcgtcacgtctgttgtccaaactgtgccacatctatggcctatgaagat
aaagagcttcatgaccaaacctgtccacttgccaatgtattttgtgaatactgcaacaca
gtgctcatcagagagcagatgcctaaccattatgacaatgattgtcctactgccccagtg
ccatgtttttatagtgcctttgggtgtcctgaaaagatgcaaaggaatgaattggcacga
catatgcaggagttcactcaggttcacatgagaatgatggctcagagttttcaaaatatc
agtgttactgctgcaaatcctgtacctttcatcaatggcctaccctttgagcctgccctc
ttctcgcacgtgtcacatgccacatatgattgtaattcagaggttgaaaacttcaaagaa
actattcagcagttggaaggtcgtctggtaagacaagatcaccaaatcagagaactcatt
gctaaaatggagactcagaacactcatatggcagaactcaaacgtactatccgaaatttg
gagggaaagattactgaaatggaggcacagcaatgtaatggtatttatatctggaagatt
gagaacttcagtggacttcagaaagcccaggaagaagagagacctgttgtgatgcatagt
cctggcttctatactggaaagcctgggtacaagctgtgtttgcgcctgcatatccaatta
ccaaatgctcagcgttgtgctaattttatctctctatttgtccacactatgcaaggagaa
tatgacagccatctgccttggcctttccaaggcactatacgactttctattttggatcaa
tcagaaggccctgaaaggcagaatcatgaagaagtaatggaggccaagccagagctacta
gccttccagagaccaacaattcaccgcaatccaaaaggttttggttatgtgactttcatg
cacctgcaaaccttgaaacaaagaactttcataaaggatgatacccttctggtgcgctgt
gaagttctaacacgtctagatttaaacagtctccgcagagaaggatttcaagctcgcagt
actgatggagctatgtag
DBGET
integrated database retrieval system
