Phaethon lepturus (White-tailed tropicbird): 104619620
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Entry
104619620 CDS
T08325
Symbol
SMG6
Name
(RefSeq) LOW QUALITY PROTEIN: telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104619620 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104619620 (SMG6)
03032 DNA replication proteins [BR:
plet03032
]
104619620 (SMG6)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104619620 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
104619620 (SMG6)
DNA replication proteins [BR:
plet03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
104619620 (SMG6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
UPF0561
Motif
Other DBs
NCBI-GeneID:
104619620
NCBI-ProteinID:
XP_010283861
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MKEVKELRHRKDNRRPDLEIYKPGLSRLRSKLVPPKHEASEKERTRAEAESTSDKSSLGP
WTPAMEDFGKGDGPKQNGPLQENEETETKGGLQSQENLSKQPAPDEGCPKTTRRTKKPDQ
QIYQPGKRLHSAAKEPSLPSATEEVTSKMEQLKVERDEETEKGTGKDNIRKTKSSKEERE
GIQAGEGMKASRGEKGRRIERSDRIRRANDEVMQGKLCSTKRYSRSDKRRSRYRTCSTSS
AGSNNSIDGAPLVDGVERRQERGRXXXXXXXXXXXASSTDSLDDDRIDEAEAYVSIRNSD
KKKRSEQSRASRSESDWSSNGREVKGPFRVTFDSKTMSRDISLADTDQKKPLRAFVSCND
SEALEARSQSREPQGRGRGILFLPANTDLSASTAGSPEPSHPGPRLLLGGAGSKGPRSRG
RGGTARRLWDPNNPDQKPALKNQTAQLHFLDTDDEVSSTSWGEARQAQPSYYKFQNSDNP
YYYPRASGQGPQYPYGGYSLQYPMGPSNGVYPGAYYPGYPGQAGQYMCGPLPPTPLSPEM
EQQMRNMQQQELSKLLREAGNQEQQLSNLLSRDRISPEGLEKMAQLRVEMLQLYERCILM
DIEFSDTQNVDQLLWKNAFYQVIEKFRQLLKDPQGENAQEIRNKLLQLLDEGTSFFDGLL
QKLQVSYQFKLEDYMDGMAIRSKPLRKMVKYALISAQRCMICQGDICRYREQANDTANYG
KARSWYLKAQQIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPILTAKESLMSL
FEETKRKAEQMEQRKHQVLDLSPSRRGKGKKSTLRQVGDDATRLEIWIHPSHPRSSQGHE
SGRDSEQDNSLGNLSPSDALMNNPCCLKYRAPLFASFHGVSKRCCILKFCVQSETXGRDL
EFLLSLPGSLLSSPVQACRKLLGLVTHSWRSIVVDERWERYKDINDLCL
NT seq
2848 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagtgaaggagctgaggcatcgcaaagacaacaggcgcccagacctggagatt
tacaagcctggcctctcccggctgaggagcaaacttgtgccaccaaagcatgaggcctca
gagaaagagaggaccagagctgaggcggagagtaccagtgacaagagctctttgggacca
tggactccagccatggaggattttggcaaaggtgatggccccaagcagaatggtcctttg
caggaaaacgaagagacagagactaaaggtggacttcagagccaggagaacttgtccaag
cagcctgctccagatgaggggtgtcccaagaccaccaggagaaccaagaagccggaccag
cagatctaccagcctgggaaacgcctgcattcagctgctaaagaaccgtcactgccatca
gctactgaggaagtcaccagtaagatggagcagctgaaagttgagagagatgaagaaact
gagaaaggtactgggaaagacaatatcaggaaaaccaaatcaagcaaggaggagagagag
gggatccaggcaggggaaggaatgaaagcctcaaggggagaaaaaggaagacgaatagag
cgaagtgacaggataaggagagcaaatgacgaggtgatgcaggggaagctgtgctctacc
aaacggtattcccgctctgacaagcggcggagccggtaccgcacctgcagcacaagctca
gctggaagcaacaacagcatagatggagccccacttgtagacggggtggagaggcgacag
gaacgcggcagggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcatcttccactgac
tctttggatgatgacagaattgatgaggcagaagcatatgtctccatcaggaattcagac
aagaaaaagcgttcagagcagagtcgagcttctaggagtgagagtgattggagcagcaat
ggcagggaagtcaagggaccctttcgagtcacatttgacagcaagacgatgagcagggat
atcagtctggcagatacagatcaaaaaaagcccctgagggcgtttgttagttgcaatgac
tcagaggctttggaggcgaggagccagagcagggagccccaagggaggggccgtgggatt
ctgttcctgcctgccaacacagacctctctgccagcactgcgggctcccccgaacccagt
catcctgggcccaggctcctgcttggcggtgctgggagcaaaggtccccgaagcaggggc
cgaggtggcactgctcgcaggctgtgggacccgaacaacccggaccaaaaacccgcttta
aagaaccagaccgctcagcttcacttcctagacacggacgatgaagtgagctctacctcc
tggggggaagcccgccaggcccagccatcctactataagttccaaaactctgacaacccc
tactattaccctcgggcctccggtcaaggcccccagtatccttacggtgggtactccctg
cagtatcctatgggtccaagcaacggtgtgtacccaggagcctattaccctgggtaccct
ggccaggcaggtcagtacatgtgtggcccgcttcctccaactcctctgagtcctgaaatg
gagcagcagatgcgcaacatgcagcagcaggagctcagcaaactcctccgcgaagctggg
aaccaggagcagcagctcagcaatctgctttccagagaccgcatcagcccagaggggctg
gagaagatggcccagctgagggtggagatgctgcagctctatgaacggtgcatcctgatg
gatattgagttctccgatacccagaacgtggaccagctgctgtggaagaatgcgttttac
caggtgattgagaaattccgtcagcttctcaaggatcctcaaggggaaaatgcccaagaa
attcggaacaaactgctccagcttctagacgagggcacttcttttttcgacggcctactc
cagaagctgcaggtgtcataccagttcaagctagaggactatatggatgggatggccatc
cgcagtaagcctctgaggaaaatggtgaagtacgcgctgatcagtgctcagaggtgtatg
atttgtcaaggggacatttgccgatatagagaacaagcaaatgatactgcaaactacgga
aaggcacgcagctggtacctgaaggctcagcaaattgctcccaaaaacggtcgcccgtac
aaccagctggcacttctggctatctacacgaggagaaagctggatgctgtctactattat
atgcgcagtctggctgctagcaaccccatactcacagccaaggagagcctcatgagtctc
tttgaagagacaaaacgcaaggctgagcagatggagcagaggaaacatcaggtgctggat
ctgagccccagccgccggggaaagggcaagaagtccacattgcgacaagttggagatgat
gccacacggctggagatctggatccatccttcccacccccgctcctcccagggccatgag
tccggcagggattctgagcaggacaacagtcttgggaacctcagccccagcgacgctctt
atgaataatccctgctgtctgaagtacagggctcccttgtttgcttccttccatggtgtc
agcaagagatgttgcatccttaagttttgtgtccaaagtgagacttgagggagagacctg
gagttccttctgtccctcccaggcagcctcctttcctcacccgtgcaagcttgcaggaag
ctgttgggtttggttactcattcgtggagaagtatcgtggtggatgagaggtgggagcgc
tacaaggacatcaatgacttgtgcctgt
DBGET
integrated database retrieval system
