Phaethon lepturus (White-tailed tropicbird): 104622434
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Entry
104622434 CDS
T08325
Symbol
AGRN
Name
(RefSeq) agrin
KO
K06254
agrin
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04512
ECM-receptor interaction
plet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104622434 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104622434 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plet00535
]
104622434 (AGRN)
Proteoglycans [BR:
plet00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104622434 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kazal_2
Laminin_G_1
Kazal_1
Laminin_G_2
EGF_laminin
SEA
Kazal_CFAI
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
104622434
NCBI-ProteinID:
XP_010287521
LinkDB
All DBs
Position
Unknown
AA seq
1630 aa
AA seq
DB search
MEQVLRLPVPLLNACAPGAAGDGGSGRSSPGLADSCPSLAALGSPLFSGAWLWACRGMLC
GFGAVCERSSTDPSQASCVCKKAACPVVVAPVCGSDYSTYSNECELEKAQCNQQRRIKVI
SKGPCGSKDPCTEVTCSFGSTCVRSTDGQSAKCVCPSSCSGVPESTVCGSDGKDYRSECD
LNKHACDKQENVFKKFDGACDPCKGVLNDMNRVCRVNPRTRRADLLSRPENCPPKREPVC
GDDGVTYDNECVMGRSGAIRGLEIQKVRSGQCQHQDKCKDECKFNAVCLNRRGTTRCSCD
RVTCDGAYRPVCAQDSRTYSNDCERQKAECHQKAAIPVKHSGPCDLGTPSPCLSVECTFG
ATCVVKNQEAVCECQQVCQGRYDPVCGSDNRTYGNPCELNSMACVLKREIKVKHKGPCDR
CGKCQFGAICEAETGRCVCPTECVPSSQPVCGTDGNTYGSECELHVRACTQQTNILVAAQ
GDCKSCGSTVCSFGSKCVGGQCVCPRCERQPFAQVCGSDGLTYDNQCELQVASCQQKKSI
EVARMGPCEDECGSGGSGSGDGSECEQDRCRHYGGWWDEDAEDDRCVCDFTCLAVPRNPV
CGSDGVTYTNECELKKTRCEKRQDLYVTSQGACRALATTPPPLLVVHCSQTIYGCCPDNM
TLALGVGAAGCPSXXXXNPYGSYGGACDPATGQCSCKPGVGGLKCDRCEPGFWNFRGIVT
DSKSGCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQCPNGSKLGMTGCEKDPSAP
KSCEEMSCEFGASCVEVNGFAHCECPSPLCSEANMTKVCGSDGVTYGDQCQLKTIACRQG
QVITVKHVGQCHESITHTSHTSPPTPLPTLPLDKLILPPPLQLTTRAPEPTELATSSLLL
EVRPSERSQPTTRHITTTRPATTPWMTQGVYKTTVRPLSTAPVVLATTQPAYVESGSAEG
SGDQEMGMSGDQESSGAGSAGEEEVEESQVSSTPAIERATCYNTPLGCCSDGKTAAADAE
GSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRNSDVKK
DFKSIRVRDLGQSSAVRVIVESHFDPATSYTAADIQGALLKQIKASKKKTILVKKPQQEH
VKFMDFDWIPRLFTTTVTTTTATTMAPATTRRDTPAAAVSTKRPTSALPATTRRKPTRQP
PATKKPVRPCDSHPCLHGGTCEDDGKEFTCSCPAGKGGAVCEKPIRYFIPSFGGKSYLAF
KMMKAYHTVRIAMEFRTVELSGLLLYNGQNRGKDFISLALVGGFVELRFNTGSGTGVITS
KVRVEPGKWHQLVVNRNRRSGMLSVDGEPHVSGESPPGTDGLNLDTDLFIGGAPEDQMAA
VADRTAATTGLKGCIRLLDVNNQMYDLREKGSDVLYGSGVGECGNDPCQPNPCHHGGICH
VKEAEMFHCECLYTYTGPTCADERNPCDPTPCHVSATCLVLPEGGALCACPMGREGDFCE
LVTEQDHTMPFLPEFNGFSYLELNGLQTFGIHNPFLLRDKMSMEVVFLAKNPSGMIFYNG
QKTDGKGDFVSLALHDGYLEYRYDLGKGAAVLRSKEPVPLNTWISVLLERNGRKGVMRIN
NGERVMGESP
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtgctgaggttgcctgtgcctttgcttaatgcctgtgctccgggcgcggcg
ggagacgggggctcagggcgcagcagccctggcctggcggactcatgcccttccctggct
gcgctgggcagccccttgttctcgggcgcgtggctttgggcgtgtcgagggatgctgtgc
gggttcggggcggtgtgtgagaggagctccaccgacccctcccaggcctcctgcgtctgc
aagaaggcggcttgccccgtggtggtggctcctgtctgtggctccgattactccacctac
agcaacgagtgtgagctggagaaggcccagtgcaaccaacagaggcggatcaaagtcatc
agcaagggaccgtgtggctccaaggacccctgcacagaggtgacctgcagctttggcagc
acgtgcgtccgctccactgatggccagtcggccaagtgcgtctgcccatcatcctgcagc
ggtgtgcctgagagcacggtgtgcggcagcgacggcaaagactaccgcagcgagtgcgac
ctcaacaagcacgcctgcgacaagcaggagaacgttttcaagaagttcgatggcgcctgt
gacccttgtaaaggcgtcctcaacgacatgaatcgtgtttgccgggtgaacccccgcact
cgaagggcagatctgctgtcccgccccgagaactgtcccccaaagagggagcctgtgtgc
ggtgacgacggggtgacttacgacaacgagtgcgtgatggggcgctcgggggccatccga
ggactggagatccagaaggtgcgttcagggcagtgccagcatcaggacaaatgcaaggat
gagtgcaagttcaatgctgtctgcctgaaccgccgtggcaccacgcgctgctcctgtgac
cgcgtcacctgcgatggtgcctaccggcctgtctgtgcccaggacagccggacctacagc
aacgactgtgagcgccagaaggccgaatgccaccagaaggctgccatcccagtaaagcac
agtggaccctgtgacctgggcacacccagcccgtgcctgagtgtggagtgcaccttcggg
gccacctgcgtggtgaagaaccaggaggctgtgtgcgagtgccagcaggtgtgccagggc
cgctacgaccctgtgtgcggcagcgacaaccgcacctatggcaacccctgtgagctcaac
tccatggcctgtgtcctcaagagggagatcaaagtgaaacacaaggggccctgcgaccgt
tgtggcaagtgccagttcggggccatctgcgaggcggagacgggaaggtgcgtgtgcccc
acggagtgcgttccctcctctcagcccgtgtgcggcacagatggcaacacgtacggcagc
gagtgcgagctccacgtccgggcgtgcacgcagcagacgaacattttggtggcggcccaa
ggagactgcaagtcctgcggcagcacggtgtgctccttcggcagcaagtgcgtgggtggg
cagtgcgtgtgcccgcgctgcgagaggcagcccttcgctcaggtgtgcgggagcgatggc
ctcacctatgacaaccagtgcgaactgcaggtggcctcctgccagcagaagaagagcatt
gaggttgccaggatggggccgtgtgaggatgagtgcggctcagggggctcgggctccggc
gatggtagtgagtgtgaacaggaccggtgccggcattacgggggctggtgggacgaggat
gcagaggatgaccgctgtgtgtgtgacttcacctgcctggcagtgccacgcaacccggtg
tgtggctctgatggtgtgacctacaccaacgagtgtgagctgaagaagacacggtgtgaa
aaacgccaggatctctatgtcactagccaaggagcctgccgcgcccttgccacaacccct
ccacctctcctggttgtgcactgcagccagaccatctatggatgctgcccagacaacatg
accttggcgcttggagtgggtgcagctggatgtccaagtnnnnnnnnnnnnaacccctac
ggctcctacgggggggcctgcgaccccgcaacagggcagtgctcctgcaagccaggcgtg
gggggcctgaagtgcgaccgctgcgagcccggcttctggaacttccgcggcatcgtcacc
gacagcaagagcggctgcacgccctgtaactgcgacccggtgggttcggtgcgtgatgac
tgtgagcagatgactggattatgctcctgcaagactggtatcactggcatgaaatgcaac
cagtgccccaatggcagcaagctgggcatgactggctgtgagaaagacccgtcagcccca
aaatcctgtgaggaaatgagctgtgagtttggggcctcgtgcgtggaagtgaacggcttt
gcccactgcgagtgcccgtccccgctctgctcggaggccaacatgaccaaggtgtgtggc
tctgatggtgtcacttacggggaccagtgccagctgaagaccattgcctgccggcaggga
caggtcatcacagtgaagcatgtggggcagtgccatgagtccatcacgcacacaagccac
acctcgccacccacaccgctgcctacgctgcctttggacaagttaatccttcctccgcct
ctgcaactcaccacccgggctccagaacccactgagctggctaccagctccctgctgttg
gaagttaggcctagtgaaagaagtcagcctacaacaaggcacatcacaactaccagacca
gccactacaccatggatgacccaaggggtgtataagaccaccgtccgccctctctccact
gcgccagtggtcctggccaccacccagcctgcctacgttgaatcgggcagcgcagaaggc
agtggagaccaagagatgggcatgagtggagatcaggaatctagtggggcaggctctgcc
ggggaagaggaggtagaggaaagccaggtatcttccaccccagccattgagagggcgacg
tgttacaacaccccgctgggatgctgctctgatggcaagactgcggctgctgatgcggaa
ggcagcaactgtccggctaccaaagtcttccaaggagtcctcatcttggaggaggtggaa
ggccaggagctgttctacacacctgagatggctgaccccaagtcagagctctttggggag
acggccaggagcattgagagtgcgctggatgagcttttccgcaattctgatgttaagaag
gatttcaagagcatccgtgtccgagacctggggcagagcagcgctgtccgtgtcattgtg
gagtcccactttgacccagccacttcctacacagcagctgacatccaaggggccctgctg
aagcagatcaaagcttccaagaagaagaccattctggtgaagaagccccagcaggagcat
gtcaaattcatggactttgactggatccccaggctcttcaccaccactgtgaccacaacc
acagccaccaccatggcacccgccaccacccggcgggacaccccggctgcagcagtgagc
accaagagacccacctccgccctccctgccaccacccggcggaagcccacgcgccagccc
cccgccacgaagaaacccgtgcggccctgcgactctcacccctgcctgcacggcggcacc
tgcgaggacgacgggaaggagttcacctgcagctgcccggcaggcaaagggggagccgtc
tgtgagaaacctatcaggtacttcatccccagctttggcggcaagtcctacctggcgttc
aagatgatgaaggcataccacaccgtgcgcatcgccatggagttcaggactgtggagctc
agtgggctgctgctgtacaatgggcagaaccgcggcaaagacttcatttccctggcgctg
gttggcggctttgtggagctgaggttcaacactggctccggcacgggcgtcatcaccagc
aaggtccgtgttgagcctggcaagtggcaccagttagtggtgaaccgcaaccgccgcagc
ggcatgctgtctgtcgacggggagccccacgtcagcggggagagcccgccgggcaccgac
ggactcaacctcgacacggacctgttcatcgggggagcgccggaggaccaaatggctgcg
gtggcagatcgtaccgcagctacgaccggcctgaagggctgcatccgcctcctggacgtg
aacaaccagatgtacgacctgcgggagaaaggcagcgatgtgctgtatggcagcggcgtg
ggcgagtgcggcaacgacccctgtcagcccaacccctgtcaccatggtggcatctgccat
gtcaaggaggcagagatgttccactgcgagtgtctctacacctacaccggcccaacgtgt
gccgacgagaggaatccctgcgaccctacgccctgccacgtttctgccacctgcctggtg
ctgccagagggaggtgccttgtgcgcctgccccatgggccgggaaggagacttctgcgag
ctagtgacagagcaggaccacaccatgcccttcctcccggagttcaatggcttctcctac
ctggagctgaatgggctgcagaccttcggtatccataatccttttctcctcagggacaaa
atgtccatggaagttgtgttcctggccaagaaccccagtggcatgatcttctacaacggc
cagaagacagatggcaaaggggactttgtctctctggccttacacgatggctatctggag
tacagatatgacctgggcaaaggggcggctgtgctcaggagtaaagagccggttcccctt
aacacttggataagtgtcttgttggagaggaatgggcgcaaaggggtaatgagaatcaac
aacggcgagagggtgatgggagagtccccg
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