Phaethon lepturus (White-tailed tropicbird): 104623328
Help
Entry
104623328 CDS
T08325
Symbol
IARS
Name
(RefSeq) LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104623328 (IARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plet01007
]
104623328 (IARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plet03016
]
104623328 (IARS)
Enzymes [BR:
plet01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
104623328 (IARS)
Amino acid related enzymes [BR:
plet01007
]
Aminoacyl-tRNA synthetase
Class I (U)
104623328 (IARS)
Transfer RNA biogenesis [BR:
plet03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104623328 (IARS)
Prokaryotic type
Other AARSs
104623328 (IARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
104623328
NCBI-ProteinID:
XP_010288685
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MVQQVPENITFPNEEEKILELWKSLXXXXXXXXXXECLKQSKNRPRFNFYDGPPFATGLP
HYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIE
EYNNQCRGIVMRYSKEWEFSVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYR
GVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDAGVSLVAWTTTPWTLPSNL
ALCVNPELQYVKLRDNATEKIYILMESRLIALYKSDSEYEILDRFPGIALKGKKYKPLFE
YFIQCKDKGAFAVVVDSYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDA
SGCFTAEVTDFAGQYVKDADKNIIKLLKEKGRLIHSSSFKHSYPFCWRSDTPLIYKAVPS
WFVRVEHMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDD
FEEVVCVGSMAELEELSGVKVTDLHRESIDHLTIPSCCGKGLLHRVPEVFDCWFESGSMP
YAQVHYPFENKKELEDSFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVL
ASDGQKMSKRKKNYPDPMSIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFL
PWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAA
YRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGTEDCMMALETLFSVLFSMCRLMAPYT
PFITELMYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGR
VIRDRKTIPVKYPLKEVVVIHQDPEALESVRSLEKYILEELNVRQVTLSTNKDKYGVRLR
AEPDHMVLGKRLKGAFKLVMAAIKELKSEQLEEFQETGTIVVEGHELHGEDLRLMYTFDQ
VAGGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYY
SSHPEGDYLDTVIKEHTDFIFATIKAALKPYPVPTSKEVLIQETTQLKGSELEITLVRGG
LCQCVGPACAYVNLKVCVNGTEQDGVLLLENPKGDNTLNFTGLVDAVSCIFGLKNSKLTV
FNGKTELINKTDLLSLSGKTLHVTTGSTPALTDSPDTLLCQYINLQLMNAKPQECQKGTV
GTLLMENPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTWEITKDVSMKNLNMKTV
YVRVIPTTAEC
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccagaaaacataacttttccaaatgaggaagagaagatattggag
ctctggaaaagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggaatgcctaaagcaa
tcaaagaatagacctaggtttaacttctatgatggccctccatttgctactgggcttcca
cactatggccatattcttgcaggaaccattaaagacatagtaaccagatttgctcatcag
agtggttttcatgttgacagaagatttggctgggattgccacggcttacctgtggaatat
gagattgacaagaccttaggcattaaagggccagaggacgtggcaaagatggggatcgaa
gaatacaacaaccagtgcagaggaattgtgatgaggtactcaaaggaatgggagttcagt
gttaccagattaggacgctggattgattttgaaaatgactataaaactctttatcctgag
ttcatggagtctgtgtggtgggttttcaagcaactgtatgacaaaggactagtgtataga
ggtgttaaggtcatgcctttttcaactgcatgcaacaccccactgtcaaattttgagtcc
catcagaattacaaggatgttcaagatccttcagtgattgtgagcttcccgctggatgaa
gatgcaggcgtttctcttgttgcctggaccaccactccttggaccttgcctagtaacttg
gccctttgcgttaatccagaattgcaatatgtaaaactgagagataatgccacagaaaag
atttacattttgatggaatccaggctgatagcactgtacaaatctgacagtgaatatgag
atacttgacaggtttcctggcattgctcttaaaggcaagaagtataaaccactctttgaa
tattttattcagtgcaaagataaaggtgcctttgctgtggtagtagacagttacgtgaag
gaggaggaaggcacaggtgttgtacatcaggccccctattttggtgctgatgattaccga
gtctgcatggattttaatattattcagaaagattctgtgcctgtttgtcctgttgatgca
tcaggctgcttcacagcagaagtgactgattttgctggacagtatgtgaaggatgcagat
aagaacatcattaaattactgaaagagaaaggcagactgattcacagcagtagttttaag
cacagctatcctttctgctggaggtcagatactccattgatatacaaagctgtgccaagc
tggtttgtaagagtagagcacatggtggagaagctactggagaataatgcccaatgctac
tgggttccagattttgtgagggagaagcgttttgggaactggcttaaagacgcacgagat
tgggctatatctagaaaccggtactggggaacacccatccctttgtgggtcagtgacgat
tttgaagaggtagtttgtgttggttcaatggcagaattggaagagctgtctggagtgaaa
gtcactgatctccatcgagaaagtattgatcacctaactatcccttcatgctgtggcaag
ggcttactgcaccgggtccctgaagtttttgattgctggtttgagagtggaagcatgcct
tatgcacaagtccattatccatttgaaaacaaaaaagaacttgaagattcttttcctgca
gacttcattgctgaaggcattgaccaaacccgaggatggttctacactttgctggtgctg
tccactgctctttttggaaggcctcctttcaagaatgtaattgtgaatggcctcgttctt
gccagtgatggccaaaaaatgagcaaaaggaagaagaattatcctgatccaatgagtatt
gtaaatagttatggagcggatgcactaaggttatacctgatcaattctcctgtggtaaga
gcagaaaatctgagatttaaggaggaaggagtaagggatatactgaaggatgtcttcctg
ccctggtacaatgcctatcgctttcttgttcagaatgttcagatcctgcaacataaggat
gagggaagagaattcctttacaatgagaacacagttaaggagagcaataacatcatggat
aaatggattctttctttcacccagtcactcattcagttcttcaaagctgaaatggcagct
tataggctgtacactgtagtccctcgattagtgaagtttgtagatattctgaccaactgg
tatgttagaatgaatcgcagaagactaaagggcgagaatgggactgaagactgcatgatg
gccttggaaaccttgtttagcgttttgttctccatgtgcagacttatggcaccatatact
ccatttatcactgagctgatgtaccagaatcttaagacacttattgatccagcctccgtt
caggaaaagaatactgaaagcatccactacctcatgcttccccaagtgagggaggatctc
atcgacaaaaaaattgaaagtgccgtttcttgtttgcagtctgttattgagcttggacga
gtaatcagagacagaaaaaccattccagtaaagtatcctttaaaagaagtagtagttatc
catcaggatccagaggctctggaaagcgtcagatctttagagaagtacatactcgaggaa
cttaatgtacgtcaagtgacactatctactaacaaagataaatatggagtccggctgaga
gcagaaccagatcacatggtgcttgggaagcgtttgaaaggtgcatttaagcttgtcatg
gctgcaatcaaagagctaaagagtgagcagctggaggaattccaggagacaggcaccatt
gttgtagaaggacatgaactccatggggaagatcttcgtctcatgtatacctttgatcag
gttgcaggaggatctgcccagtttgaggcacattcggatgctcaggttttagttctgcta
gacgttactccagaccagtccatggtggatgaaggagttgcccgggaagtgattaatcgc
atccagaagcttcgcaaaaagcgaaatctggtccctacagatgagattacagtgtactac
agctcacatccagaaggtgactacctggatactgttattaaggaacacacggatttcatt
tttgcaacaataaaggctgccctgaagccttacccggtgcctacctcaaaagaagttctc
atccaggaaacaacccaactgaagggatcagagctagaaattacactcgtcagaggtggt
ttgtgtcagtgtgttggtccagcctgtgcctacgtcaacctcaaagtttgtgttaatggg
acagagcaagatggtgtgttgctgctggaaaatccaaaaggagataataccttgaacttc
actggacttgtagatgctgtctcctgcatttttggtcttaaaaattcaaaactgacagtt
tttaatggaaaaacagaactgataaacaaaactgacttgcttagtctcagcggaaagact
ctacatgtgacaacagggtcaacacctgctctgactgactctcctgacactcttctctgc
cagtatatcaacctgcagctaatgaatgccaaaccacaagaatgtcagaagggtacagtg
ggaactcttctaatggagaaccctgtgggtcagaatggattaacgtaccagggtcttcta
catgaaacggcaaaagtttttgggctcagaagcaggaggctaaaattgttcctggatgaa
gcgcaaacttgggagatcacaaaggacgtctccatgaagaacttgaacatgaaaactgta
tatgttcgtgttatacccaccacagctgaatgttga
DBGET
integrated database retrieval system
