Phaethon lepturus (White-tailed tropicbird): 104625332
Help
Entry
104625332 CDS
T08325
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03440
Homologous recombination
plet03460
Fanconi anemia pathway
plet04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104625332 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
104625332 (BRCA1)
03460 Fanconi anemia pathway
104625332 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plet01009
]
104625332 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plet04121
]
104625332 (BRCA1)
03036 Chromosome and associated proteins [BR:
plet03036
]
104625332 (BRCA1)
03400 DNA repair and recombination proteins [BR:
plet03400
]
104625332 (BRCA1)
Enzymes [BR:
plet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104625332 (BRCA1)
Protein phosphatases and associated proteins [BR:
plet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104625332 (BRCA1)
Ubiquitin system [BR:
plet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104625332 (BRCA1)
Multi subunit type E3
BRCC complex
104625332 (BRCA1)
Chromosome and associated proteins [BR:
plet03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104625332 (BRCA1)
DNA repair and recombination proteins [BR:
plet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104625332 (BRCA1)
BRCA1-A complex
104625332 (BRCA1)
BRCA1-B complex
104625332 (BRCA1)
BRCA1-C complex
104625332 (BRCA1)
BRCA complex
104625332 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
104625332 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
BRCT_2
zf-Nse
zf-C3HC4_3
zf-RING_6
BRCT_3
zf-RING_5
zf-ANAPC11
Zf_2nd_IFT121
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
104625332
NCBI-ProteinID:
XP_010291235
LinkDB
All DBs
Position
Unknown
AA seq
1858 aa
AA seq
DB search
MDFSVIAIGEVQNVLSAMQKNLECPICLDVVEEPVSTKCDHIFCRFCMFKLLSKKKKGVI
QCPLCKTEVTKRSLKENSRFKQLIEGLFETIHAFELDTGVKFLNSHHFPKTSTEATAAEF
LCKESSVIQSKGFRKRKKSAEENGQQNCTLQVDTQLTDTRVKRCPLRIKAQKYDSEKEIY
IEFGSDSSEELFKQASNTGLEDKEVLQISSQEKLEEFKSAEKGSEYSCNTHLDKVAAKEI
ILPNVIGESDFSKEGLSKKSTRSITEYAKLGQVNTTECQSFPLKVFAVDLLTEQCDRIGN
ASPLRNGDTSFFKNTEEMDAEQTQCNSKSKEFDLKDSSESGLDKSKEIDIVQTVEAVETY
EPKNDSSHEKELPVEKLLKPETLHCATQSQVSRKRLKRSIQKVNEWFSKSNEILSSNSSQ
DDSAGATDVSGEGDACLSDKDSCISEKTDPMVDSMETEVVERNKRWSKQTADSIKDKIFG
KTYKRERKSNPSILREILPTTKKEDAAADEKCLNNSSKDRLKQRRKTASLLQPEDFIKKK
GIEEADDCPQSINWCLGDAEKKKCDQSSAVNESHLSESREDNTRAELDEGGGSVWKKAAE
KVTGKYCDGELKLSNCDQKSTKKSSSAAKRCRHSTRTVCALQLVVDRNSVSPDPSEPQID
SYSSSGEPRKADSERRQVRRSRRLQLLSEEMTKETGKGVVIKGARKYDSVHEGSFFGVRG
DVLVHTSECKDLCEPQGMLSYKPLTNLKGGDLAANEIQISLKNSSDIAETGKSLFNPTSS
CQHSNCSCFAPDAGSQEGEILCSPLHLQSPSMTVVHTASHPTEELRESRTTFPQDSRHDA
QNVPGDFRTGKLTMAKNILEFMKEAEDSELDTQYLRNIFRHSKRLSFSLYRTPMKACTVE
DAASETLKIACADQVENKHSKYLKPENLQEEKTTAESLSRVCEKEKLKTYESACVSPVTC
FVGNTECMHAGEHQEDVSQAANQGNLTVIRMGAARTEDENRSQKGEQGNEKTVSTDIGIE
SELRQNPIKNNSQSDQSNTEEHIFKRTDLNTVNEIGFSSESNQAGKAKVVDSKGPILHFP
SRSMICPETCQQRPAQFSCEVTGEKSSKRERKQVKGNEEAATQTASTGMPECLVTEALEE
PLKGNSDFTGLSETPDGLLCSDDDIEKNTSFSETDRKERSAVFVKRSDNTLVKELHNRNV
SSQGIQRSRRRAQKLQSSDEESSEDEDLPCFQTLIFGKSVSTPLQINNQVTSVVESSVSP
ITLPHNESHDDNNMQKMPEAALSNGCVSPSQESECSVNLFSSQSNMSEESVDGAQELKKP
LIQVHTSKQVSNVNESKETFQSCDGGLKRSKTNFKDECQEDPNMGANLGEASGYDSETSN
VEDSCGPFSQGEILTTQQKNAMQNNLKKLQQEMAVLEAVLKQHGSQDCEFLPICRELPHS
SSEETLGMEQMRQQRGAESTSEGNLENHKCSCSKEFSANDFHVMPSDSLNSKIRELEKER
FTELLLPSSKSYLLKRTDFKKGLQCDSVLKNTAPSEKTKPVQEAVQEYSQCQLEAENADE
QKSGTRLNSACVLPNLSGNVTRSPNSSSSSERLLNPQTAEATDSSLVSQNANKSRAQEHK
SKRSVCFPVSVLHNAAGKENATSPVVTNRKKMSIVASGLNPSEHLVVQKFARKTESTLSN
HITEGTTHVVMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILDEEDFEVRG
DVINGRNHQGPKRARQSLTEKIFKDFEICCYGPFTDMTTEHLEWMVELCGASVVKQVHLF
THKTNSNAVVVVQPDAWMENMDYRAIQQKNSVAMVIREWVLDSVACYKCQEFDGYLVS
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattgctattggagaggtacaaaatgtgctttcagcaatgcagaag
aatttggagtgcccaatatgcttggatgtggtagaagagccagtttcaacaaaatgtgat
cacatattctgcaggttctgcatgttcaaactcctcagcaaaaagaaaaaaggtgtgata
cagtgtcctctgtgtaagactgaagttaccaaaagaagtctgaaagaaaattccagattt
aagcaactaattgaagggttgtttgaaactatccatgcatttgagcttgacactggagta
aagtttttaaatagtcatcacttccctaaaacatccacagaagccactgctgctgagttc
ctgtgtaaagaaagttctgttatccaaagtaagggcttcagaaaaaggaaaaaaagtgct
gaagaaaatggacaacaaaactgcaccttgcaagtggatacacagcttacagataccagg
gtcaaaagatgtcccctaagaatcaaagcccagaaatatgactctgaaaaagagatttat
atagagtttggctctgattcatctgaagagctttttaaacaggcaagcaatactgggtta
gaagacaaagaagtgcttcagatttcatctcaagaaaagctagaagaatttaagagtgct
gagaaggggagtgaatattcttgcaatacacatcttgacaaagtggctgctaaagaaata
attctaccaaatgtcataggtgaaagtgatttctcgaaggaaggcttgagcaagaaaagc
actcggagcatcactgaatatgccaaacttggccaagtgaatacgactgaatgccagagt
tttcctttaaaggtttttgctgtagacctactcacagagcagtgtgacagaataggtaat
gccagtcccttaaggaatggggacacatctttctttaagaacacagaagaaatggatgca
gagcaaactcagtgcaacagtaaaagcaaagagtttgacttaaaagatagctcagagagc
gggttggataaaagcaaggaaatagatattgtacaaactgtggaagctgtggaaacgtat
gaacccaagaatgattcttcccatgaaaaagaacttcctgtggagaaactacttaagcca
gagacacttcactgtgctacccagagtcaagtctctaggaagagactgaagcgaagcatt
cagaaagtcaatgaatggttttcaaaaagcaatgagattctgtcttccaattcttcccag
gatgattctgctggagcaactgatgtttcaggtgaaggagatgcatgtttatcagataaa
gattcctgtatttcagaaaagactgaccctatggtagattccatggaaactgaagtggtt
gaaagaaacaaaagatggtcaaaacaaacagcagatagcatcaaagacaaaatatttggg
aaaacatacaagagagagaggaagtcaaatccctctatcttgagagagattttacctact
acaaaaaaggaagatgcagctgctgatgagaagtgcttgaataattccagtaaagacaga
ctaaagcaaagaaggaagactgcctctctcctgcagcctgaggatttcatcaagaaaaaa
ggtatagaagaggcagatgactgccctcaaagtattaactggtgccttggggatgctgaa
aagaaaaaatgtgatcaaagctctgctgttaatgagagtcacctgtctgaaagtagagag
gataatacacgagcagaacttgatgaaggaggaggatccgtatggaagaaagctgctgaa
aaggtgactggcaagtactgtgatggggagctgaaactgagtaactgtgatcagaaaagc
actaaaaaaagtagttctgcagcaaaaagatgcaggcattctactagaaccgtgtgtgct
ctacagttagtagtggatagaaactctgtttccccagatccatctgagccacagattgat
agctattcaagcagtggagaaccaaggaaagctgattctgagcgaagacaagtcaggcgc
agcaggagacttcagttactttctgaagaaatgacaaaagaaacaggaaaaggagtagta
attaagggagcaaggaagtatgacagtgtgcatgaagggtctttctttggagtccgaggg
gatgtattagttcacacttctgaatgcaaagacttgtgtgagccccagggtatgctgagt
tacaagccactcactaatctgaagggtggtgatctggctgcaaatgaaatacagattagt
ctaaagaattcatctgacattgcagaaactggaaaaagtctcttcaatcctacatcttca
tgccagcattcaaactgtagttgctttgcacctgatgcaggttctcaagaaggtgaaata
ctatgtagccctttgcacctacagtctccctcaatgactgttgtgcacactgcttcccac
ccgactgaagagttgagagaatcacgtactacttttccccaggatagtagacatgatgca
caaaatgttccaggggacttcagaactggaaagttgacaatggctaaaaatattttggaa
tttatgaaggaagctgaagatagtgagttagacacacaatatctgcgaaatatatttagg
cattcaaaacgcctatcatttagcctttatcgtactcccatgaaggcgtgtacagtagaa
gatgctgcttctgaaactttaaagatagcgtgtgctgatcaggtagaaaataagcatagc
aagtatttaaaaccagaaaacttgcaagaagagaaaacaactgctgaaagcttgagtagg
gtttgtgagaaagagaagcttaagacctatgaatctgcttgcgttagtcctgtgacttgc
tttgttggcaacactgaatgtatgcacgcaggggaacatcaagaagatgtttcacaggct
gcaaatcaagggaatctgacagtaataagaatgggtgctgctaggacggaagatgaaaac
agatcacaaaaaggagagcaaggtaatgaaaagacagtgtcaactgacatagggatagaa
agcgagttgagacagaatccaatcaaaaataatagccaaagtgatcagagtaatacagaa
gagcacattttcaaaagaactgatttaaacacagtcaatgaaataggcttcagttcagaa
agcaatcaagcaggaaaggccaaagttgttgacagcaaaggaccaatactacattttcca
tccagatcaatgatttgtcctgaaacttgtcagcaaaggcctgctcaattcagctgtgaa
gtcactggggaaaaaagtagcaaaagagaaagaaaacaagtaaaggggaatgaagaagca
gcaacccaaactgctagcacagggatgcctgagtgtttagttacagaggctctagaagaa
cctcttaaagggaatagtgattttacaggtttgtctgaaacccctgatggtttactgtgc
tctgatgatgatattgaaaagaacaccagcttttctgaaactgataggaaagagagatct
gctgtgtttgtaaaaagaagcgataataccctggtaaaagaactacacaatagaaatgtt
agttctcaaggtattcaaagatctcgaagaagagcacagaaactgcaatcttcagatgaa
gaatctagcgaggatgaagatttaccatgttttcagacattaatatttggcaaatcagta
agcacacctttgcagatcaacaaccaagtgacatctgtggtagagtcttcagtaagtcct
atcacattgcctcacaatgaaagtcacgatgacaataatatgcagaaaatgcctgaagct
gccctaagtaatgggtgtgtttcaccaagccaggagtcagaatgctctgtcaacttgttt
tcttcccagtccaacatgtctgaagaatcagttgatggagcacaagagctgaagaaacct
ttaatacaagttcatacatccaaacaagtgagcaatgtgaatgagagtaaagaaactttt
caaagttgtgatggagggctgaagagaagcaaaacaaacttcaaagatgaatgccaagaa
gacccaaacatgggagcaaacctaggtgaagcatctggatacgatagtgaaacaagtaat
gtagaagattcatgtggaccattctctcagggtgaaatacttactacacagcagaagaat
gctatgcaaaataacctaaaaaaacttcagcaagaaatggctgtacttgaagcagtgcta
aagcagcatggaagtcaggactgtgaatttttacctatctgtagggaactgccacattcc
agtagtgaagaaacacttggaatggaacaaatgagacaacaaagaggggcagagtcaacc
tcagaaggaaatcttgaaaatcataaatgcagctgttcaaaggaattttcagccaatgat
ttccatgttatgccaagtgattctctcaacagtaaaatcagagagttagaaaaagaaagg
tttacagaattgttgcttccatcttctaaatcctatttgttaaagagaacagatttcaag
aaaggccttcagtgtgacagtgttctgaagaacacagctccttctgaaaagacaaaacct
gtgcaggaagcagtgcaagaatatagtcagtgtcagcttgaagcagaaaatgcagatgag
cagaaatctgggaccaggctaaacagtgcatgtgtcttgccaaatctctctggaaatgtg
accaggagtccaaatagctcttcctcctctgaaaggcttcttaaccctcaaactgcagaa
gcaacagatagttctcttgtatctcagaatgctaataaaagccgtgctcaagaacataaa
tcgaagagaagtgtgtgttttcctgtatctgttctgcacaatgcagctgggaaagaaaat
gctacaagtccagttgtgactaacaggaaaaaaatgtcaattgtggcatcaggtctgaat
ccaagtgagcatttggtggtccagaagtttgcaagaaaaactgagagcactttatctaat
cacattactgaaggaacaacccatgtcgtaatgaaaacagataaggagctggtgtgtgaa
cggacactgaagtactttctgggtattgcaggaagaaaatgggtagttagttatcagtgg
gtaattcagtcttttaaagaaggaaggatactggatgaggaggactttgaagttagagga
gatgtaatcaatgggagaaaccaccaaggtcctaagagggctagacagtctctgactgaa
aagatctttaaagactttgagatctgttgctatggacctttcactgatatgactaccgaa
catctagaatggatggtggagctttgtggtgcctctgtagtgaagcaagttcatctgttc
acacacaaaacaaattctaatgctgtcgtggttgtgcagccagatgcgtggatggaaaac
atggattacagagcaatccagcaaaagaacagtgttgccatggtgattcgagagtgggta
ttagacagtgttgcttgctataagtgccaggagtttgatggttaccttgtgtcttaa
DBGET
integrated database retrieval system
