Phaethon lepturus (White-tailed tropicbird): 104626579
Help
Entry
104626579 CDS
T08325
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet03018
RNA degradation
plet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104626579 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
104626579 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plet03019
]
104626579 (LSM3)
03041 Spliceosome [BR:
plet03041
]
104626579 (LSM3)
Messenger RNA biogenesis [BR:
plet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104626579 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
104626579 (LSM3)
Spliceosome [BR:
plet03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104626579 (LSM3)
Complex C
U2 snRNP components
104626579 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
104626579
NCBI-ProteinID:
XP_010292829
UniProt:
A0A091TX65
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
QQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEID
EETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
caacaaacaacaaatactgtagaagagccacttgatctcatcagactcagtctagatgag
cgaatctatgtcaaaatgaggaatgacagagagcttagaggcagactacatgcgtatgat
cagcacttaaatatgattttgggcgatgtggaagaaactgtaactacaatagagattgat
gaagaaacctatgaagaaatctataaatctaccaaaaggaatattccgatgctctttgtc
agaggtgacggcgttgtgcttgtagctcccccgttgagggttggttga
DBGET
integrated database retrieval system
