Peromyscus leucopus (white-footed mouse): 114683270
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Entry
114683270 CDS
T07241
Symbol
Smcr8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04140
Autophagy - animal
pleu05014
Amyotrophic lateral sclerosis
pleu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114683270 (Smcr8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114683270 (Smcr8)
05022 Pathways of neurodegeneration - multiple diseases
114683270 (Smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114683270 (Smcr8)
Membrane trafficking [BR:
pleu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
114683270 (Smcr8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
eRF1_1
Motif
Other DBs
NCBI-GeneID:
114683270
NCBI-ProteinID:
XP_028713320
LinkDB
All DBs
Position
8b:43445706..43457152
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AA seq
935 aa
AA seq
DB search
MISAPDVVAFTKEDEYEEEPYNEPALPEEYSVPLFPYASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKMGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYTSQAIEKANELANVE
KSIIEHQDLLRQIRSYPRQKMKMPDLHPGDVEHTQDQAEQVSTTSNPEESANADLYTCRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLAQLSHIEHMFRGDLCYLLTSQIDRA
LRKQQHITNFLFEDFMEIDDRLEKPENVPSQSSQDRLPSRPVQECPIPKVLISVGSYKSS
VESVLIKMEQELGDGEDKEVEATESSSFDPQENLDYLDMDMKGSVSSGESIEVLGTEKSS
SVLSKSDSQASLTVPLSPHVVRSKAVSHRTISEDSIEVLSTCPSEALIPDDFKASYPSAI
NEEESYADNEGAIHFEASVSPPELGETQEGSLENTPSQIDSSCCIGKESEGQLVPLPTPA
YTLSDEDGVVSIPPQRYEHKDQGFHVDAMMENTDPSLRDNSGEMFPAYELDPSCLLASRD
VSKTSLDNYSDTTSYMSSVASTSSDRTPSAHSASLSSDRHKKRAGQNALKFIRQYPFAHP
AIYSLLSGRTLVVLGEDETIVRKLVTALSIFVPSFGYYAKPVKHWISSPLHIMDFQKWKL
IGLQRVASPASMGTLHTLSRYSRYTSILDLDSKTLRCPLYRGTLVPRLADHRTQIKRGST
YYLHVQSMLTQLCSKAFLYTFCHPLHLPAHSEETQEAVASRQTSFLKFNLGLVNEDVRVV
QYLGELLKLHYTQEPPGAAHPLLRFDYVPSFLYKI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgatgtggtggctttcaccaaggaagacgagtacgaggaggagcct
tataatgagcccgccttgccggaggagtactcagtacctctcttcccctatgccagccag
ggggctaacccctggtctaaactgtccggggccaagttctccagggacttcattcttatt
tccgagttctctgagcaggtggggccccagcccttgctgaccatccccaatgataccaaa
gttttcggcacttttgatctcaattacttctccttgcggatcatgtcagtggattaccag
gcttcattcgtgggtcatcctcctggttctgcctaccccaagttgaactttgtggaggac
tccaaggtggtactgggagactctaaggaaggggcctttgcatatgtgcaccaccttact
ttgtatgacctggaggcccgtggctttgtgaggcccttttgtatggcttatatctctgca
gaccagcataagatcatgcagcaattccaggagctttcagctgaattttccaaagcatct
gagtgcttgaagatgggtaacaggaaggcatttgctggggaacttgaaaaaaagctgaaa
gacttggactacacgaggacagtgctgcacacggaaactgagatccaaaagaaagccaac
gacaaaggcttttatacatctcaagcaatcgagaaagccaacgaactggccaacgtggaa
aagtccatcattgagcatcaagatttgctgaggcagatccgctcataccctcgtcagaag
atgaagatgcctgatttgcatcctggtgatgtggagcatactcaagatcaggctgagcag
gtatctactacctctaaccctgaggagtcagcgaatgcagacctttatacctgcagaccg
gcttacacccccaaactcatcaaagcaaaatccaccaagtgttttgacaagaagttgaag
accttagaggaactctgtgacacggagtatttcactcaaaccctggcccagcttagccac
attgaacacatgttcagaggagacctgtgctacctcctgaccagtcagattgacagagca
cttcgcaaacaacagcacatcacgaatttcctctttgaagacttcatggagattgatgac
aggctggagaaaccagagaatgtgccctctcagtccagtcaggacaggctgccgtccagg
cctgtgcaagaatgccccattcctaaagtgttgattagtgttggttcttacaagtccagc
gtggagtctgtgttgatcaagatggagcaggaacttggcgatggagaggacaaggaagtg
gaggcaacagagtccagcagttttgacccccaggaaaacctggactacctggacatggac
atgaaagggagtgtcagcagcggggagagcatcgaggtcctgggcaccgagaagtcgtcc
tctgtgctgtcgaaatctgacagccaggccagcctcacggtgccgttgagcccccatgta
gtccgcagcaaggcagtcagccacaggacaatcagtgaggacagtattgaagtcttaagc
acctgcccatcggaggccctcattcctgatgactttaaggccagctacccaagtgccatt
aacgaggaggaaagctatgcagataatgagggggccatccatttcgaggcaagtgtcagc
cccccagaactgggtgagactcaggagggcagcttggaaaataccccatcccaaatagac
tccagctgctgtattgggaaggagagtgaaggtcagctggttcctctgcccaccccagct
tatactctctctgatgaggatggtgtggtgagcatccccccacagcgctacgaacacaag
gaccaagggttccatgtggacgccatgatggaaaacactgacccgtctctccgagacaac
agtggtgaaatgttcccagcttatgagctggatccaagctgcctcctggctagccgagat
gtcagtaagacaagcctggataactactcggataccactagctacatgagcagtgtggcc
tctaccagctcggacagaaccccctctgctcactctgctagcctctcctctgacagacac
aaaaagagagctggccagaatgccttaaaattcatccgccagtacccttttgcccaccca
gccatctactccctgcttagtgggaggacacttgtggtcctgggcgaagatgaaaccata
gtcaggaagcttgtaactgcactgtccatctttgttcccagctttggctactatgccaag
ccagtgaagcactggatatcctcccctttgcatattatggattttcagaagtggaagctt
attggcctacagagggtggcctcccctgccagtatgggtaccctccataccctgagccgt
tacagccgctatacaagcatcctggacctggacagcaagaccctacgctgtcccctgtac
aggggtacactggtgccccgcctggctgaccaccgcactcagatcaagcgaggcagcacg
tactacctgcacgtccagagcatgctcacccagctctgctccaaggcattcctctacact
ttctgccaccccctgcatctgcctgcccacagcgaggagacgcaggaagcggtggccagc
agacaaaccagcttcctcaagttcaacctggggctagtgaacgaggacgtcagggtggtg
cagtacctgggtgagctgctcaaactgcactacacgcaggagccacctggggccgcccac
cccctgctcaggtttgactatgtccccagcttcctgtacaaaatctga
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