Peromyscus leucopus (white-footed mouse): 114688012
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Entry
114688012 CDS
T07241
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
114688012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114688012
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pleu04054
]
114688012
Membrane trafficking [BR:
pleu04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
114688012
Pattern recognition receptors [BR:
pleu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114688012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
AAA_16
LRR_6
NPHP3_N
NB-ARC
AAA_14
AAA_30
nSTAND3
AAA_22
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
114688012
NCBI-ProteinID:
XP_037056950
LinkDB
All DBs
Position
8b:complement(54303305..54343181)
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AA seq
1165 aa
AA seq
DB search
MKFLEWSNDLELLSKVHDSLRHFQISKKKLDKWKPEDSGFQSKEMHQNEERESLYHTASW
KTKDLLQNFTQLLLLQKPRPRGWETMVWKSGSKGKGEERGHLIEIQDLFNPNPDTQEEPQ
LVVLEGAAGIGKSTLARQVRRAWEEGQLYRDRFQHVFYFSCRELAQYKKLSLAELIAKDQ
TVPVAPIKKILSHPEKLLFILDGIDEPAWILEEQNPELCLHWNEAQPVHRLLGSLLGKSI
LPGVFLLLTARTTYFQKFVPSLGQPRWVEVLGFSKSGRKKYIYKYFTEKQEAIEAFSLIK
SNPVLSTLCVVPWVSWLVCTCLKQQMEQGRDLSLTSQTTTALCLKYLSQTLPGHALGTPL
RRLCSLAAEGIWRRRSLFSKRDLWKQGLSEDVIAPFLKVGVIQKQLSSVSYSFANLCLQE
FFAAMSCILKNYEEKHDFVETYDIVETLKKVYGRRDLFEHLTMQFLFGLLSENGMREMEK
IFACRLPCETMYLRWLIQEEVLYHQPRSLGLLHCLYEIQDKNLLTNVMDNYQATSMQAPV
DMAHPEFHINLAVQTDVELMVVTFCINFCNYVYGLWLNPGVQQKKMMPTPRMVLSRWTPI
TNASWQILFSTLEFTENLKFLDLSGNPLSYYALCSLCRTLRCPGCHLRVLWLVDCSLTSS
HCADLASVLRISSSLTELDLQLNDLGDRGVSLLCKGLRSPACKLRILWLDQAPLSDQAMM
ELRAVKAKNPQLLISSTWKPHVMDPTKNPIGEEMGDSLTSFKHQRLQSGHKHLEPVGTED
DFWGPTGTVATEVVDKERNLYRVQFPVPGSYHCPNIGLRFVVTRAVTIEIGFCAWSQHLD
KTPLQHSHMVAGPLFDIKAEQGAVAAVHLPHFVDLQEGQVDVSWFSVAHFQEHGMVLETP
ARVEQNCTILENPNFSPVGVLLRLIPAVRHFIPITSVTLIYYFVNLKEVTLHLYLIPNDC
TIRKAIDDEEMKFQFVRINKPPPLDSLYIGSRYTVSASKKLEIIPKELELCYRSPGESQL
FSEIYVDHMGSGIKLQITDKKHQNLIWEALLKPGDLRPVLPMITASHKDAPALPHFLDQH
REQLVARVTSVDSLLDKLHSLVLSEEEYEAVRAEATNQNKMRKLFSLSRSWSWDSKDQVY
RALKETHPYLIMDLYETSRSVSVRS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccttgaatggtcaaatgacttagaactgttgagcaaagtccatgattccttg
agacactttcagatctcaaagaagaaacttgataaatggaaacctgaggactctggattc
caaagcaaagaaatgcatcagaatgaagaaagagagagtctttaccacactgcgtcctgg
aaaaccaaggatttgctccaaaatttcacacagctattacttctacaaaaacctcgtcca
agaggctgggagaccatggtctggaaaagcggaagtaaaggtaaaggagaggagagagga
catctgattgagatccaagacttatttaacccaaacccagatacccaggaagagcctcag
ctagtcgtattagagggggctgctgggattgggaagtcaacgctggccaggcaggtgagg
agagcatgggaggaaggacagctctacagagatcgcttccagcatgtcttctacttcagc
tgcagagagctggcccagtacaaaaaactgagtctggctgagctcatagcaaaagaccag
actgtgcctgtagctcccattaagaagatcctgtctcaccctgagaagctgctcttcatc
ctggatggcatagatgagccagcatggatcttggaggagcagaatcctgaactctgtttg
cactggaacgaggcacagcctgtgcacagactgctgggcagtttactggggaaatccatc
ctgcctggggttttccttctgctcacagctcggaccacatattttcagaagtttgttcct
tctttagggcagccacgttgggtagaagtcctgggtttctctaagtctggacggaagaaa
tatatctacaaatatttcacagagaaacaagaagcaattgaagcttttagcttaattaaa
tcaaacccagtgctctcgaccctgtgtgtggtgccctgggtgtcctggctggtctgcaca
tgcctgaagcagcagatggaacagggaagagacctctcactgacctcacagaccaccaca
gccctctgcctgaaatacctttcccagactcttcctggtcatgccttggggacccctctc
agaaggctctgctcactggctgctgaggggatctggagaagaaggagcctgttcagtaag
agagatctctggaagcaagggttatctgaggatgtcattgcccctttcctgaaggtgggt
gtcattcaaaagcagctcagctctgtgagttatagctttgccaacttgtgtctccaggag
ttctttgcagcaatgtcctgcatcttgaagaattatgaggagaaacatgactttgtggaa
acctatgatattgtggaaacactgaagaaagtctatggaagacgtgacctgtttgagcat
ctcactatgcaattcctatttggtcttttaagtgaaaatggaatgagagagatggagaag
atctttgcctgcaggttgccttgtgagacaatgtacctacgatggctcatccaagaggaa
gtcctataccatcaaccacgttctctgggtttactgcactgtctgtatgagattcaggat
aagaatctcctgacaaatgtgatggacaattatcaagcaacaagtatgcaggcgccagta
gatatggcacatccagaatttcacataaacctggcagtccagacagatgtggagctcatg
gtggtcacattctgcattaatttttgcaattatgtctatggactttggctgaatcctggt
gtacagcaaaagaaaatgatgccaacccccaggatggttctatccagatggactccaatc
actaatgccagttggcagattctcttctccacccttgagttcacagaaaacctgaagttc
ctggacctaagtggaaatccactgagctactatgcactgtgcagtctttgtaggaccctg
agatgccctggatgtcaccttagggtattgtggcttgtcgactgtagccttacatccagc
cactgtgcagacctagcctcagtgctcaggatcagctccagtctgactgagctagacctg
cagctcaatgacctgggagaccgtggtgtgagtctgttgtgtaaggggctcaggagtcct
gcctgcaaactcagaatcctgtggctggaccaggcccctctcagtgaccaggcgatgatg
gagctcagagctgtgaaggcaaagaatccacagctgcttatctccagcacatggaagcca
catgtgatggaccctactaagaacccgattggagaagaaatgggtgatagcctgacctca
ttcaagcatcaaagactacagtcaggacacaagcacctggaaccagtggggactgaagat
gacttctggggacctacagggactgtggctactgaggtggttgacaaagagaggaacctg
taccgagttcagttccctgtgcctggttcctaccactgtcccaacataggactccgcttt
gtggtgacaagggccgtgaccatcgagattggattctgtgcctggagccaacacctggac
aagactcccttgcagcacagtcacatggtggctgggcctctgtttgacatcaaggctgag
cagggagctgtggctgctgtgcacctccctcattttgtggatctccaagagggacaggtg
gacgtctcctggttcagtgtggcccactttcaagaacatgggatggtcctagaaacgcca
gccagagtggagcagaactgcacaatcttggaaaacccaaacttctccccagtgggagtt
ctactgagactgatccctgctgtcagacacttcatccccatcacttccgtcacattgatt
tactattttgtcaatctcaaggaagtcacccttcatctctacctgatccccaatgactgc
accattcggaaggccattgatgatgaagaaatgaagttccaatttgttcgaataaacaag
ccaccaccactagactctctttatattggctcccgctacacagtgtctgcttccaagaag
ctggaaatcatcccaaaggaactggagctgtgctacaggagccctggggaatcccagctc
ttctctgagatctatgttgatcacatgggttcagggattaagctccagattacagacaag
aagcatcagaatctcatttgggaagccttgctgaaaccaggggacctgagacctgtactg
cccatgatcactgcaagccacaaagatgcccctgccttgccacacttcctggaccagcat
cgggagcagctggtggcccgagtgacatcagtggactctctcttggacaagttgcatagt
ctagtgctgagtgaagaggagtatgaggcagtgcgggctgaggccaccaaccaaaacaag
atgaggaagctcttcagcctcagcaggtcctggagctgggacagtaaagaccaagtctac
cgagctctgaaggagacccatccttacctgatcatggacctctatgagacgtcaagaagt
gtctctgtgagatcctga
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integrated database retrieval system
