Peromyscus leucopus (white-footed mouse): 114688015
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Entry
114688015 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1b allele 4-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
114688015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114688015
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pleu04054
]
114688015
Membrane trafficking [BR:
pleu04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
114688015
Pattern recognition receptors [BR:
pleu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114688015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
NOD2_WH
LRR_6
AAA_16
NPHP3_N
NB-ARC
AAA_22
AAA_14
nSTAND3
Zeta_toxin
Birna_VP5
Motif
Other DBs
NCBI-GeneID:
114688015
NCBI-ProteinID:
XP_037057072
LinkDB
All DBs
Position
8b:complement(54157850..54176979)
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AA seq
718 aa
AA seq
DB search
MLHLSLPYFEVIPEINQNQGKENLHYTQTWETRGFLQNFTQLLLLQKSCPRGWETLIRES
SHECVAEERGHLIEIQDLFCPKPDAQEEPQLVILEGAAGIGKSMLARQVRREWGEGQLYR
DRFQHVFYFSCRELAQCEKLSLAELIAKDQTVPVAPIKKILSHPEKLLFILDGIDEPAWV
LKEQNPELCQHWRQPQPVHRLLGSLLGKSILPGASLLLTARTTALQKFIPSLGKPRWVEV
LGFSESGRKEYIYKYFTKQREAITAFSLVDSNPVLSTLCLVPWVSWLVCTCLKQQMEQGR
DLSLTSQTTTALCLKYLFQTLPDSALGTQLRGLCSLAAEGIWRRRTLFCERDLQNQGLSE
DVIALFLKMGVLQTIVQQPRSLSYSFAHLCLQEFFAAMFCILGNNEEKCGDIENYRVVET
LVEVYGTQDLFEAPTIRFLFGLLSEQGVNVMEKIFTTHLSLNTLWEMLDKARALPQHQHL
YSLGLFHCLYEIQNEELLTQVMDNLQKKQVCDLKDMMHPVFQTNVKHLVIQTDVELMVVT
FCINFCCHVKRLQLDGCGQQGPMLMSPRMVLXVEPWIPVGSDTSWKILFSTLEFTGNLEE
LDLSGNPMSYTALQKLCKTLRRPECHLKTLWLVNCGLTSGHCKHLASVFRASSSLAELDL
QQNDLGNRGVRLLCEGLRNPNCSLRILWLDQAPLSDQVMMELRTLEAKNPRLLISSTW
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctttctctcccttattttgaagtcattccagaaataaatcagaaccaagga
aaagagaatcttcactacacacagacctgggaaacaaggggttttctccaaaatttcaca
cagctactactcctacaaaaatcttgcccaagaggctgggagactttgatcagggaaagt
tcgcatgaatgtgtagcagaagagagagggcatctgattgagatccaagacttattttgc
ccaaagccagatgcccaggaagagccccagttagtaatattagagggggctgctgggatt
gggaagtcaatgctggccaggcaggtgaggagagaatggggagaaggccagctctacagg
gatcgcttccagcatgtcttctacttcagctgcagagagctggcccagtgcgagaagctg
agtctggctgagctcatagcaaaagaccagactgtgcctgtagctcccatcaagaagatc
ctgtctcaccctgagaagctgctcttcattctggatggcatagatgagccagcatgggtc
ttgaaggaacagaatcctgagctctgtcagcactggagacagccacagcctgtgcacaga
ctcctgggcagtttgctggggaaatccatcctgcctggggcttccttgctgctcacagct
cggaccacagctctacagaagttcattccttccttggggaagccacgttgggtggaagtc
ctgggcttctctgagtctggacgaaaggaatatatctacaaatatttcacaaagcaaaga
gaagcaattacagcttttagcttggttgactcaaacccagttctctcaacactatgtctg
gtgccctgggtatcctggctggtctgcacttgcctgaagcagcagatggagcaggggaga
gacctctcactgacctcacagaccaccacagctctctgcctgaaataccttttccagact
ctcccagacagtgccctgggaacccagctcagagggctctgctcactggctgctgagggg
atctggagaagaaggaccctgttctgtgagagagatctccagaatcaagggttatctgag
gatgtcattgcccttttcctgaagatgggtgtccttcaaacaattgtccagcagcccagg
tctctgagctacagctttgcccacttgtgtctccaggagttctttgcagcaatgttctgc
atcctggggaataatgaggagaaatgtggtgatatagaaaactacagagttgtggaaaca
ctagtagaagtgtatggaactcaagacctgtttgaggcacccaccatacgcttcctattt
ggccttttgagtgaacaaggagtgaatgtgatggagaagatcttcaccactcacttgtct
ctgaacaccctatgggaaatgctggataaagccagggcattgccccagcaccaacatctc
tattctctggggttgtttcattgtttgtatgagattcagaatgaagagctcctgacacag
gtgatggacaatcttcaaaaaaaacaggtttgtgacctgaaagatatgatgcacccagtg
ttccagacaaacgtgaagcacctggtgatccagacagatgtagaactcatggtggtcact
ttctgcattaatttctgctgccatgtgaagaggcttcagctggatggttgtggacagcag
ggaccaatgctgatgtcccctaggatggttctgtgagtggaaccctggatacctgttgga
tcagataccagttggaagattctcttctccactcttgagttcacaggaaacctggaggag
ctggacctaagtggaaatccaatgagctatactgcacttcagaaactttgtaagacactg
agacgccctgaatgtcacctaaagacattgtggctggtcaactgtggcctcacatccgga
cactgtaaacacctggcctcagtgttcagggccagttccagcctggctgagctagaccta
cagcagaatgacctgggcaaccgtggtgtgaggctgctgtgtgaggggctcaggaatcct
aactgcagcctcagaatcctgtggctggaccaggcccctctcagtgaccaggtgatgatg
gagctcaggaccctggaggcaaaaaatccacggctgctcatctccagcacatggtaa
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