Peromyscus leucopus (white-footed mouse): 114688678
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Entry
114688678 CDS
T07241
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
114688678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114688678
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pleu04054
]
114688678
Membrane trafficking [BR:
pleu04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
114688678
Pattern recognition receptors [BR:
pleu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114688678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
CARD
NLRC4_HD2
NOD2_WH
AAA_16
NPHP3_N
NB-ARC
LRR_6
nSTAND3
AAA_30
Birna_VP5
AAA_14
Zeta_toxin
AAA_22
Motif
Other DBs
NCBI-GeneID:
114688678
NCBI-ProteinID:
XP_037056951
LinkDB
All DBs
Position
8b:complement(54616265..54735181)
Genome browser
AA seq
1167 aa
AA seq
DB search
MGKAQSKEASDKKEAQHEGQHVLEPTHHTRRQMDLELKGNKAQAEKDFKLRTFPSFQTKQ
VRENVYPTESWKKNDLLQNFTQLLLLKKTCPRSQETLVWKSWCKCKGEERGHLIEIQDLF
NPYLDTQEKPQLVILEGAAGIGKSTLARQVRRAWEEGQLYRDRFQHVFYFSCRELAQCKQ
LSLAELIAKDQTVPVAPIRQILSHPEKLLFILDGVDEPAWVLEEQNPELCLHWSQLQPVH
TLLGSLLGKSLLPEASLLLTARITNLQKVIPSLREPCWVEVLGFSKSGRKKYIYKYFTKK
REAIAAFNLVNSNPMLSTLCVVPWVSWLVCTCLKQQMEQWGELSLTSKTTTALCLKYLSQ
IFPDPALGTQLKALCSLAAKGICRRKTLFSEIDLWEHGLTENVIATFLKMGVLQKQPSPL
SYSFSQVCLQEFFAAMSYILRNRERRGDTEIFRIADAMKKVYGRHNLFEAPTVRFLFGLL
SKEGIREMEKIFACRFLEETLYYQPYSLDLLHCLYEIQDKELLSEVMHNYQVRSVQASMD
MVHPVFQTNMKYLVVQTDVELMVVTFCIKFCHHVKRLQLNGDGQQEQTLTAPRMVLSRWT
PITNASWRILFSTLEFTGSLEELDLSGNPLSCYALRSLCRTMRCPGCHLRTLWLVNCGLT
SSHCMYLASVLSASSSLAELDLQLNDLGDRGVRLLYEGLRNPACKLRILRLDQAPLSDQV
MMELRALETENPQLLISSTRKPHVMVPNKNPDGEEMDDSLTSFKHQRLQSGYKHMESLGT
EDDFWGPKGPVATEVVDREKNLYRVQFPVPGSYHCPNSGLRFVVTRAVTIEIGFCAWSQH
LDKTPLQHSHMVAGPLFDIKAEQGAVAAVHLPHFVDLQDRQVDISWFSVAHFQEHGMVLE
TPARVEQCYTILENPSFSPMGVLLRMIPAVGLFIPITSITLIYYRLNLEEVTLHLYLVPN
DCTIRKAIDDEEIKCQFVRINKPPPLDSLYIGSRYTVSASKKLEIIPKELELCYRSPGES
QLFSEIYVGHMGSGIKLQIRDKKHRNLIWEALLKPGDLRPAPPMIPAAHKDAPALPHFLD
QHREQLVARVTLVDPVLDKLHGLVLNEEEYELVRAEATNQDKMRKLFSLSRSWSWASKDQ
VYQALKKTHPHLIMDLLEKSGGVSVRS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagcacagtccaaggaggcaagtgacaaaaaggaggctcagcatgagggtcaa
catgtcttggaacccacccaccacacaaggaggcagatggacctggagctgaaagggaac
aaagcccaggcagagaaggacttcaagctaaggacattcccttccttccagactaagcaa
gtaagagaaaatgtttatcccactgagtcctggaaaaaaaatgatttgctccaaaatttc
acacagctactacttctaaaaaaaacttgcccaagaagccaggagaccttggtctggaaa
agctggtgtaaatgtaaaggagaggagaggggacatctgattgagatacaagacttattt
aacccatacctggatacccaggaaaagcctcaactagtcatcctagagggggctgctggg
attgggaagtcaacgctggccaggcaggtgaggagagcctgggaggaaggccagctctac
agggatcgcttccagcatgtcttctacttcagctgcagagagctggcccagtgcaagcag
ctgagtctggctgagctcatagcaaaagaccagactgtgcctgtagctcccatcaggcag
atcctgtctcaccctgagaaactgctcttcatcctggatggcgtagatgagccagcatgg
gtattggaggaacagaatcctgaactctgtctacactggagccagctacagcctgtgcac
acactgctgggcagtttgctggggaaatctttacttcctgaggcttccttgctgctcaca
gctcgaatcacaaatctacagaaggtcattccctctttgagggaaccttgttgggtagaa
gtactgggtttctccaagtctggacggaagaaatatatctacaaatatttcacaaagaaa
agagaagcgattgcagcttttaacttggttaactcaaatccaatgctgtcaacactgtgt
gtggtaccctgggtgtcctggctggtctgcacttgcctgaagcagcagatggagcagtgg
ggagaactctcattgacctcaaagaccaccacagccctctgcctgaaatacctttcccag
attttcccagatcctgccctggggacccagctcaaagcactttgctcactggctgccaag
gggatttgtagaagaaagacccttttcagtgaaatagatctctgggagcatgggttgact
gagaatgtcattgccactttcctgaagatgggtgttcttcaaaagcagcccagccctctg
agctacagcttctcccaggtgtgtctccaggagttctttgcagcaatgtcctacatcttg
aggaatagggaaagacgtggtgatacagaaatctttagaattgcagatgcaatgaagaaa
gtttatggaagacataacctttttgaggcacccactgtgcgcttcctatttggtcttttg
agtaaagagggaataagagaaatggagaagatctttgcctgcaggtttctagaggaaacc
ctatactatcaaccatattctctggatttactccattgtctgtatgagattcaagataag
gagctcctctcagaggtgatgcacaattatcaagtaagaagtgtgcaggcctcaatggat
atggtacacccagtgttccagacaaacatgaaatacctggtggtccagacagatgtagaa
ctcatggtggtcacgttctgtatcaagttctgccaccatgtgaagaggcttcagctgaat
ggggatggacagcaagaacaaaccctgacagcccccaggatggtactgtccaggtggacc
ccaatcactaatgccagttggcggattctcttttccacacttgagttcacaggaagcctg
gaggagctggacctaagtggaaatccactgagctgctatgcactgcgcagtctttgtagg
accatgagatgccctggatgtcaccttaggacattgtggcttgtcaactgtggcctcaca
tccagccactgcatgtacctggcctcagtgctcagtgccagctccagcctggctgagcta
gacctgcagctgaatgacctgggcgaccgtggtgtgaggcttctatatgaggggcttaga
aatcctgcctgcaaactcagaatcctgcggctggaccaggcccctctcagtgaccaggtg
atgatggagctcagggccctggagacagagaatccacagctgctcatctccagcacaagg
aagccacatgtgatggtccctaataagaacccagatggagaagaaatggatgatagcctg
acctcattcaagcatcagagactacagtcaggatataagcacatggaatcactggggact
gaagatgacttctggggccctaaagggcctgtggctacagaggtggttgacagagagaag
aacctgtaccgagttcagttccctgtgcctggttcctaccactgtcccaactcaggactc
cgctttgtggtgacaagggccgtgaccatcgagattggattctgtgcctggagccaacac
ctggacaagactcccttgcagcacagtcacatggtggctgggcctctgtttgacatcaag
gctgagcagggagctgtggctgctgtgcacctccctcattttgtggatctccaagacaga
caggtggacatctcctggttcagtgtggcccattttcaagaacatggaatggtcctagaa
acgccagccagagtggagcagtgctacacaatcttggaaaacccaagtttctccccaatg
ggagttctactgagaatgattcctgctgtcgggctcttcatccccatcacttccatcaca
ttgatctactatcgactcaatcttgaggaagtcacccttcatctctacctggtccccaat
gactgcaccattcggaaggccattgatgatgaagaaataaagtgtcagtttgttcgaata
aacaagccaccaccactagactctctttatattggatcccgctacacggtgtctgcttcc
aagaagctggaaatcatcccaaaggaattagagctgtgctacaggagtcctggggaatcc
cagctcttctctgaaatctatgttggccatatgggttcagggattaagctgcaaatcaga
gacaagaagcataggaatctcatatgggaagccttgctgaaaccaggggacctcagacct
gcaccacccatgatccctgcagcccacaaagatgcccctgccttgccacacttcctggac
cagcatcgggagcagctggtggccagagtgacattagtagaccctgtcttggacaagcta
catggtctggtgctgaatgaagaagagtatgaattggtgcgggctgaagccaccaaccaa
gacaagatgaggaagctcttcagcctcagcaggtcctggagctgggccagcaaagaccaa
gtctaccaagctctgaagaagacccatcctcacctgatcatggacctccttgagaagtca
ggaggtgtctctgtaagatcttga
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integrated database retrieval system
