Peromyscus leucopus (white-footed mouse): 114689232
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Entry
114689232 CDS
T07241
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
114689232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114689232
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pleu04054
]
114689232
Membrane trafficking [BR:
pleu04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
114689232
Pattern recognition receptors [BR:
pleu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114689232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
NB-ARC
AAA_14
nSTAND3
AAA_30
AAA_22
Zeta_toxin
CARD_2
AAA_5
AAA_18
Motif
Other DBs
NCBI-GeneID:
114689232
NCBI-ProteinID:
XP_037056949
LinkDB
All DBs
Position
8b:54496616..54582134
Genome browser
AA seq
1712 aa
AA seq
DB search
MSSRDKDPLASCSEQQEKGDVKQDLWELHSQASSEDSITMEADQSKKASATEETQHKDQQ
DLDFIHKRRKQKGQEPQWTKAQAEKDLMLNSSSSFLRRRSKHSLQSLTDQGHEALSTIGF
FGPLRRPIPLSMTIERPRKNMPSGEPTAVLSRGTATPQDSAQLLSLSEEICSMSPPSAVG
LSSLSSTRPSKPHKAKPQDSAQFLSPRIDLLSGTYFSALSVSSLSSTSLSNTDTAKPQDS
AQLLSPGLDLFSGSPLSGEPTDVWSTGTSGLQDSAQILSLGEEICGMRPLSGEPTAVWSA
GTSTPLDSQQLLSPSEEMGGMSPLEAIDLSSLSSTSPSNTDTAKPQDSAQLLSPGLDLFS
GSHLSGEPTADWSAGTAIPHDYVQLLSRSEEICSMSPLSAVSLSSLSSTRPSKPHKAKPQ
DFGQLLSPGIDVLSGSSLSAFPSSSLGSTSPPNLHTASPQDSAQLLSSGHGIWRMRPHSD
SSSTFPASRSTPRVQSPTYEGCTVQPRQGAAVHRQSLPLRTIQNSAFSSSSLGSTSTPTL
DTTIPQDSVQLLSSGHGIFRKRPHSRITPEIYHNQEGENLYPSKTEDLPQYFTQLLLLQK
SCPRGWETLDRKSWHQCVAEERGHLIKAKDLFLPSTGTQEEPHLVILEGAAGIGKSTLAR
QVRRAWEEGQLYRDRFQHVFYFSCRELAQYKQLSLAELIAKDQAVPEAPIRQILSHPEKL
LFILDGIDEPAWVLEEQNPELCLHWSQQQPVNTLLGSLLRKSILPRASLLLTARTTVLKK
LIPSLGQPRWVEVLGFSESGRKEYFNKYFAKKKESIAAFSFIESNPVLSTLCFVPWVSWL
VCTCLKQQMEQGGDLSMTAQTTTSLCLKYLSQTLPSKHQGNELTGLCSLAAEGICQRRTL
FREIDLQDQGLSEDVIATFLKIGVLQKQPSSLSYSFAHLCLQEFFAAMSYILGGSERHDD
MENYRIVETLIEVYGRQDLFEAPTIRFLFGILSERGMKEIRKIFTGPLILHTPWDLLGKS
RALLQHQQLYSLGLFHCLYEIQNEELLTQVMHDLQEMRDNTLTDMMHQLFQTNVKHLVVQ
TDVELMVVTFCIKFCHYVKRLQLNGAVKQGQTLMAPRMVLYRWTPITNASWKILFSTLEF
TGSLEELDLSGNTLSYFALWNLCKTLKCPGCHLKTLWLISCGLTSSHCVDLASLLKASSS
LTELDLQLNDLGDQGVRLLCEALRNPACNLRILRMDQAPLSAQVMMELRTVEAENSQLHI
SSTWKPRVMDPTKNPDGEEMDDYQNSCKRQRLQSEEGCSQFAPLEPFHPSSPDSPRDKHL
ESLGTEDDFWGPTGPVATEVVDRKRSLYRVQFPVPGSYHCPNTGLHFVVTRAVTIEIRFC
AWTQYLDETPLEHSHMVAGPLFDIKAEQGAVAAVHLPHFVALQEGHVDISRFCVAHFQEH
GMVLETPTRMEQHYAVLENPSFSPVGVLMNMTPALGHSIPITSITLIYYHLNLKEVTFHL
YLVPNDCTIRKAIDDEEMKFQFARINKPPPVESLYIGSRYIISGSRNLEIFPKELELCYR
SPGELQLFSEIYVDHMVSGITLHIKDKKHKNIIWKALLKPGDLRPARPMTDEANKDAATL
LHFLDQHREQLVARVTSVDPVLDKLHGAVLSEEEYEAVRAEATNQGKMRKLFILSRSWTR
AYKDRVYRALKETHPHLIVELLEKSSGISVGS
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagagacaaggatccactggcctcctgctcggagcaacaggagaagggagac
gtgaagcaggacctgtgggagctgcacagccaagcatcatctgaggactctatcaccatg
gaagcagatcagtccaagaaggcaagtgccacagaggagactcagcataaggaccaacag
gacttggacttcatccacaaaaggaggaagcagaagggccaggagccacagtggaccaaa
gctcaggcagagaaggacttgatgctaaacagttcttcatcatttcttcgcagaagaagc
aaacacagtctgcaatcacttaccgaccaaggacatgaagcactatcaacaattggcttt
tttggaccacttaggagaccaattccactttcgatgacaattgagcgtccaagaaaaaat
atgccttcaggtgaacctacagctgttttgagcagagggacagctacaccccaagattct
gcacaactactcagtctaagtgaagaaatttgtagcatgagccctccttcagctgtcggt
ttatcatctcttagctccacacgaccatctaagccacataaagctaaaccccaagattct
gcacaatttctgagtccaagaatagaccttttaagtggaacctatttttcagctctcagt
gtatcatcacttagctccacaagcctatccaacacagatacagctaaaccacaagattct
gcacaactactgagcccaggattagacctatttagtggaagccctctttcaggtgaacct
accgatgtttggagcacagggacatctggcctccaagattctgcacaaatactcagccta
ggtgaagaaatttgtggcatgagacctctttcaggtgaacctacagctgtttggagcgca
gggacatctacccccctagattctcaacaactactcagcccaagtgaagaaatgggtggc
atgagccctctggaagctatcgatttatcatcacttagctctacaagcccatccaacaca
gatacagctaaaccacaagattctgcacaactactgagcccaggattagacctttttagt
ggaagccatctttcaggtgaacctacagctgattggagcgcagggacagctatcccccat
gattatgtacaactactcagccgaagtgaagaaatttgtagcatgagccctctttcagct
gtcagtttatcatctcttagctccactcgaccatctaagccacataaagctaaaccccaa
gattttggacaactactgagcccaggaatagatgttcttagtggaagctctctttcagcc
tttccttcatcatctcttggctccacaagcccacccaacctacatacagcttccccacaa
gattctgcacaactactgagctcaggccatggaatttggaggatgagacctcattcagac
agttcatcaacatttcctgcctcaagaagcacaccccgtgtacaatcacctacctatgaa
ggatgtacagtacaaccacgacaaggagctgcagttcacagacaatctctgcctttgaga
acaattcagaattcagccttttcttcatcatctcttggctccacaagcacacccaccctg
gatacaactatcccccaagattctgtacaactactgagctctggtcatggaatttttagg
aagagacctcattcaagaatcactccagaaatatatcataaccaagaaggagagaatctt
tatccctcaaaaacagaagatttgccccaatatttcacacagctactacttctacaaaaa
tcttgcccaagaggctgggagacattggacagaaaaagctggcatcaatgtgtagcagag
gagagaggacatctgattaaggccaaagacttatttctcccaagcacaggtacccaggag
gagcctcacctagtcatattagagggggctgctgggattgggaagtcaacactggccagg
caggtgaggagagcatgggaggaaggccagctctacagggatcgcttccagcatgtcttc
tacttcagctgcagagagctggcccagtacaaacagctgagtcttgctgagctcatagca
aaagaccaggctgtgcctgaggctcccatcaggcagatcctgtctcaccctgagaagttg
ctcttcatcctggatggcatagatgagccagcatgggtcttggaggagcagaatcccgag
ctctgtctgcactggagccaacaacagccagtgaacacacttttgggcagtttgctgagg
aaatccatcctgcctagggcttccttgctgctcacagctcggacaacagttctgaagaag
ctcattccttccttggggcagccacgttgggtggaagtcctgggtttctctgagtcagga
cggaaggaatacttcaacaaatattttgcaaagaaaaaagaatcaattgcagcttttagc
ttcattgaatcaaacccagtgctctcaacactatgttttgtgccctgggtgtcctggctg
gtctgcacttgcctgaagcagcagatggaacaaggtggagacctctcaatgactgctcag
accaccacatctctctgcctgaaatatctttcccagactctcccatccaagcaccaggga
aatgagctcacagggctctgctcactggctgctgaggggatctgccaaagaaggaccctg
ttccgtgagatagatctccaggatcaagggttatctgaggatgtcattgccactttcctg
aagattggtgtccttcaaaagcagcccagttctctgagctacagttttgcccacttgtgt
ctccaggagttctttgcagcaatgtcctacatcttaggaggtagtgaaagacatgatgat
atggaaaactacagaattgtggaaacacttatagaagtgtatggaagacaagatctgttt
gaagcacccaccatacgcttcctatttggcattttaagtgaacgggggatgaaagagata
aggaagatcttcacaggccccttgattctgcacacaccatgggacctgctggggaaatcc
agggcattgctccagcatcagcagctgtattctctggggttgtttcattgtctgtacgag
attcaaaatgaggagctcctgacacaagtgatgcatgatcttcaagaaatgagggacaat
accctgacagatatgatgcaccaattgttccagacaaatgtgaagcacctggtagtccag
acagatgtggagctcatggtggtcactttctgcattaagttctgccattatgtgaagagg
cttcagttgaatggggctgtaaagcaaggacaaacactgatggcccccaggatggttctg
tacaggtggaccccaataactaatgccagttggaagatcctcttctctactcttgagttc
acaggaagcctggaggagctggacctaagtggtaatacactgagctactttgcactgtgg
aatctttgtaagaccctgaaatgccctggatgtcacctaaagacattgtggcttatcagc
tgcggcctcacatccagccactgtgtggacctggcttcattgctcaaggccagttccagc
ctgactgagctagacctgcagctgaatgacctgggtgaccaaggtgtgaggctgctgtgt
gaggcgctcaggaatcctgcctgcaacctcagaatcctgagaatggaccaggctcctctc
agtgcccaggtgatgatggagctcaggactgtggaggcagagaattcacagctgcacatc
tccagcacatggaagccacgtgtaatggaccctactaagaacccagatggagaagaaatg
gatgattaccagaactcatgtaagcggcagagactacagtcagaggaggggtgctcacaa
tttgcaccactagagccgttccatccatcttctcctgactctccaagagacaaacacctg
gaatcactggggactgaagatgacttctggggacctacaggacctgtggctacagaggtg
gttgacagaaagaggagcctgtaccgagttcagttccctgtgcctggttcctaccactgt
cccaacacaggactccactttgtggtgacaagggcagtgaccatcgagattcgattctgt
gcctggacccaatacctggatgagactcccttagagcacagtcacatggtagctgggcct
ctatttgacatcaaggctgagcagggagctgtggctgctgtgcacctccctcattttgtg
gctctccaagagggacatgtggacatctcccggttctgtgtggcccactttcaagaacat
gggatggtcctagaaactccaacaaggatggaacagcattatgcagtgctggaaaaccca
agcttctccccagtgggagttctaatgaatatgactcctgctcttggacactccatcccc
atcacttccatcacattgatctactatcacctcaatctcaaggaagtgacatttcacctt
tatctggtccctaatgactgcaccattcggaaggccattgatgatgaagaaatgaaattc
caatttgctcgaataaacaagccacccccagtagaatctctttatattggttcccgctac
atcatatctggttccaggaacctggaaatcttcccaaaggaactagagctgtgctacaga
agccccggggaattgcagctcttctctgagatctatgttgatcacatggtttcagggatt
acgctccatatcaaagacaagaagcacaagaatatcatatggaaagccttgctgaaacca
ggggacctcaggcctgcacggcccatgactgatgaagccaacaaagatgctgctaccttg
ctgcatttcctggaccagcatcgggagcagctggtggcccgagtgacatcagtagaccct
gtcttggacaagctgcatggtgctgttctgagtgaagaggagtatgaggcagtgcgggct
gaagccaccaaccaaggcaagatgaggaagctcttcatcctcagtcggtcctggaccagg
gcctacaaagatcgagtctaccgagctctgaaggagacccatcctcacctgatagtggaa
ctccttgagaagtcaagtggcatttctgtgggatcttga
DBGET
integrated database retrieval system
