Peromyscus leucopus (white-footed mouse): 114690476
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Entry
114690476 CDS
T07241
Symbol
Scn4a
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pleu04040
]
114690476 (Scn4a)
Ion channels [BR:
pleu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
114690476 (Scn4a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
114690476
NCBI-ProteinID:
XP_028721146
LinkDB
All DBs
Position
8b:86069434..86097578
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AA seq
1720 aa
AA seq
DB search
MFIMITILTNCVFMTMSNPPSWSKDVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWN
WLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVM
ILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPMNNTNTTWYGDDVWYGNDSWYGNDTWSS
QESWASNYTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGHCPEGYECIKAGRNPNYGY
TSYDTFSWAFLALFRLITQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVV
AMAYAEQNEATLAEDQEKEEEFQQMLEKYKKHQEELEKAKAAQALEGGEADGDPAHSKDC
NGSLDTSGEKGPPRPSCSADSAISDAMEELEEAHQKCPPWWYKCAHKVLIWNCCAPWVKF
KHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFTAEMVL
KLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLN
MLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIASDCSLPRWHMHDF
FHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLFLALLLSSFSA
DSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLRGKILSPKDIMLSLGEPGDAGET
GESAPEDEKKELPPEDGNKDLKDNHILNHVGLTDGPRSSIELDHLNFINNPYLTIQVPIA
SEESDLEMPTEEETDTFSEPEDIKKPLPPVYDGNSSVCSTADYKPPEEDPEEQAEENPEG
ELPEECFTEACVQRCPCLSVDISQGRGKMWWTLRRACFKIVEHNWFETFIVFMILLSSGA
LAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYFTNAWCWLDFLIVDV
SIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVC
LIFWLIFSIMGVNLFAGKFYYCVNTTTSERFDISVVNNKSECESLMHTGQVRWMNVKVNY
DNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPHYEVNIYMYLYFVIFIIFGSFFTL
NLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVY
DFVTKQVFDISIMILICLNMVTMMVETDDQSQLKVDILYNINMVFIIIFTGECVLKMFAL
RHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKG
IRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDMFNFETFGNSII
CLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTSFKGDCGNPSIGICFFCSYIIISFL
IVVNMYIAIILENFNVATEESSEPLSEDDFEMFYETWEKFDPDATQFIDYSRLSDFVDTL
QEPLKIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKQTMEEKFMA
ANPSKVSYEPITTTLKRKQEEVCAIKIQRXYRRHLLQRSMKQASYMYRHSQDGNGDGAPE
KXGLIANTMNKMYGPENENSGVQSQGEEEKGSTGDAGPTMELTPTSPLDTAQTTLPPPPS
ASLPPSASPPPSASPPPSTPPPPSPPQGQTVRPGVKESLV
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgtttatcatgatcaccatcttgaccaactgtgtgttcatgaccatgagcaacccgcct
tcttggtccaaggacgtggagtacaccttcacagggatctacacctttgagtctctcatt
aagatgttggcccgaggcttctgcattgatgacttcacattcctccgggacccctggaac
tggctggatttcagtgtcatcaccatggcgtatgtgaccgagtttgtggatctgggcaat
atctcagccctgaggaccttccgtgtgctgcgggccctgaaaaccatcacggttatccca
gggctgaagaccattgtaggagccctgatccagtccgtgaaaaagctgtcagacgtgatg
atcctcaccgtcttctgcctgagcgtcttcgccctggtggggctgcagctcttcatgggg
aacctgcggcagaagtgcgtgcgctggcccccgcccatgaacaacaccaacaccacgtgg
tatggtgacgacgtgtggtacggcaatgactcgtggtacggcaacgacacttggagcagc
caggagagctgggccagcaactacaccttcgactgggatgcctacatcaacgacgaaggg
aacttctacttcttggagggctccaatgacgccctgctctgcgggaacagcagtgacgcc
gggcactgtcccgaaggttacgaatgcataaaggctgggcggaaccccaactacggctac
accagctacgacaccttcagctgggccttcctggcactcttccgtctcataacccaggac
tactgggagaacctcttccagctgacccttcgagcagcgggcaagacctacatgattttc
tttgtggtcatcatctttctgggctccttctacctcatcaatctgatcctggcggtggtg
gccatggcctatgccgagcagaacgaagctaccctggctgaggaccaggagaaagaggag
gagtttcagcagatgcttgagaaatacaaaaaacaccaggaggagttagaaaaggctaag
gccgcccaggctctggagggcggggaggcagacggggacccggcccacagcaaggactgc
aacggcagcctggacacgtctggggagaaggggcccccgaggccaagctgcagcgcggac
agcgccatctcagacgccatggaggagctggaagaggcccaccagaaatgcccgccgtgg
tggtacaagtgtgcacacaaagtgctcatctggaactgctgtgccccgtgggtgaagttc
aagcacatcatccacctcatcgtcatggaccccttcgtggacctgggtatcaccatctgc
atcgtgctcaacaccctcttcatggccatggagcattaccccatgaccgagcactttgat
aatgtgctctccgtgggcaacttggtcttcacgggcattttcactgcagaaatggtgctg
aagctgatcgccatggacccctatgagtatttccagcagggctggaacatctttgacagc
ttcatcgtaaccctcagcctggtagagctgggcctggccaacgtgcaagggctatccgtg
ctccgctccttccgtctgctgcgtgtcttcaagctggccaagtcctggcccacacttaac
atgctcatcaagatcattggcaactcagtgggtgcgctgggcaacctgaccctggtgctg
gccatcatcgtcttcatcttcgcggtggtgggcatgcagctgtttggcaagagctataag
gaatgtgtgtgcaagattgcctcggactgcagcctgccccgctggcacatgcatgacttc
ttccactccttcctcatcgtcttccgcatcctctgtggggagtggatagagaccatgtgg
gactgcatggaggtggccggccaggccatgtgcctcaccgtcttcctcatggtcatggtc
atcggcaacctggtggtcctgaatctgttcctggctctcctgctgagttccttcagtgcc
gacagcttggcggcatcagacgaagacggcgagatgaacaacctgcagatcgccatcggg
cgcatcaagtggggcatcggctttgccaaagccttcctcctggggctgttgcgcggcaag
atcctgagccccaaggacatcatgcttagcctgggtgagcccggggatgctggggagacc
ggggaaagtgctcccgaggacgagaagaaggaactgccacccgaagatggaaacaaggac
ctgaaggacaatcacatcctgaaccacgtgggcctgactgatggcccccgctccagcatc
gagctggatcacctcaacttcatcaacaacccctacctcaccattcaggtgcccattgcc
tccgaggagtccgacctggagatgcccacagaagaggagactgacacgttctcggagcct
gaagacatcaagaagccgctaccgcctgtctatgacgggaactcctccgtctgcagcaca
gctgactacaagccccctgaagaggaccctgaggagcaggctgaggagaaccctgagggc
gagctgcctgaggaatgcttcacggaggcctgtgtgcagcgctgcccctgcctctctgtg
gacatctcccagggccgtgggaaaatgtggtggacgctgcgccgggcctgtttcaagatt
gtggaacacaattggtttgagacctttattgtcttcatgatcttgctcagcagcggagcc
ctggccttcgaggacatctacatcgagcagcggcgggtcatccgcaccatcctggaatat
gccgacaaggtcttcacctacatcttcatcctggagatgctgcttaagtgggtggcctac
ggcttcaaggtgtatttcaccaacgcctggtgctggcttgatttcctcattgtggacgtc
tccatcattagcctagtggccaactggctgggctactctgagctggggcccatcaaatcc
ctgcgcacactacgggccctgcgtcccctgagggcactgtcgcgatttgagggcatgagg
gtggtggtgaacgccctcctgggagccatcccctccatcatgaatgtgctccttgtgtgc
ctcatcttctggctcatcttcagcatcatgggggtcaacttgtttgctgggaagttctac
tactgtgtcaacacaaccacctctgagagattcgacatctctgtggtcaacaacaagtct
gagtgtgaaagcctcatgcacacgggccaggtccgctggatgaacgtcaaggtcaactat
gacaacgtgggtctgggctatctctccctccttcaggtggccactttcaagggttggatg
gacatcatgtatgcagccgtggactcccgggagaaggaggagcagccgcactatgaggtg
aacatctacatgtacctttacttcgtcatcttcatcatctttggctcctttttcacgctc
aatctcttcatcggcgtcatcattgacaacttcaaccaacagaagaagaagtttggaggg
aaagacatcttcatgacagaggagcagaagaaatactacaatgccatgaagaagcttggc
tccaagaagccccagaagcccattccccgacctcagaacaagatccagggcatggtgtac
gacttcgtgacaaagcaggtgtttgacatctccatcatgatcctcatctgccttaacatg
gttaccatgatggtggagacggatgaccagagccagctcaaggtggacatcctatacaac
atcaacatggtcttcatcatcatcttcacaggggagtgtgtgctcaagatgtttgctctg
cgccattactacttcaccattggctggaatatcttcgactttgtggtggtcatcttgtcc
atcgtgggccttgcgctttctgacttgatacagaaatactttgtgtcacccacactgttc
cgtgtgatccgattggcgcggattgggcgagtcttgcgtctgatccgtggggccaagggc
atccggacgctgctgtttgctctcatgatgtcactgcctgctctcttcaacatcggcctc
ctcctcttcctggtcatgttcatctactccatctttggcatgtctaactttgcctatgtc
aagaaagagtcgggcatcgacgacatgttcaacttcgagacgtttggcaacagtatcatc
tgcctctttgagatcaccacgtcagccggctgggatgggcttctgaaccccatcctcaat
agtgggcccccagattgcgacccgacactggagaacccaggcaccagcttcaagggtgac
tgtggcaacccatccattggcatctgtttcttctgtagctacatcatcatctccttcctc
atcgtggtcaacatgtacattgccatcatcctagagaatttcaatgtggccactgaggag
agcagcgagcccctcagtgaggatgactttgagatgttctatgagacctgggagaagttc
gaccctgatgccactcagttcatcgactacagccgcctctctgactttgtggacaccctg
caggagccgctgaaaatcgccaaacccaacaagatcaagcttattacattagacctgccc
atggtgccgggggacaagatccactgcctggacatcctctttgccctgaccaaagaggta
ctgggtgactctggggagatggatgccctcaagcagaccatggaggagaagtttatggcg
gccaacccctccaaggtctcctatgagcccatcaccaccaccctcaagaggaagcaggag
gaggtgtgtgctatcaaaatccagaggngctatcgccgccacctgctgcagcgttctatg
aagcaggcctcctacatgtaccgccacagccaggatggcaacggagacggagcccccgag
aagngaggcttgattgccaacaccatgaacaagatgtacggccctgagaatgagaacagt
ggtgtgcagagccagggggaggaggagaaagggtctacaggggatgctggacccaccatg
gagctcacacccaccagccccttggacactgcccagactactcttcctcctcctccatca
gcgtcattaccaccatcagcatcaccaccaccatcagcatcaccaccaccatcaacgcca
ccaccaccatcaccaccacaggggcagactgtgcggccaggggtcaaagagtctcttgta
tag
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integrated database retrieval system
