Peromyscus leucopus (white-footed mouse): 114691081
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Entry
114691081 CDS
T07241
Symbol
Irf5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114691081 (Irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114691081 (Irf5)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
114691081 (Irf5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
114691081
NCBI-ProteinID:
XP_028722042
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Position
3:complement(58648055..58662894)
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AA seq
497 aa
AA seq
DB search
MNQPAPGVAPPPRRVRLKPWLVAQVNSCQYPGLQWVNGERKLFYIPWRHATRHGPSQDGD
NTIFKAWAQETGKYTEGVDEADPAKWKANLRCALNKSRDFRLFYDGPRDMPPQPYKIYEV
CSNGPAPTESQPTDEYIPGEDEEEEEEELQRMLPSLTITDPVLPGPPIAPYSLPKEGVKW
PPALQPSVGLGHPAPDPNLLAPPSGNPAGFRQLLPEDLEPGPLAPSQPPPEQLLPDLLIS
PHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQLEATQEQVELFGPVSLEQVRFPS
PEEIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCALANGSRPNPI
QREVKTKLFSLEQFLNELILFQKGQTNTPPPFEIFFCFGEEWPDLKPREKKLITVQVVPV
AARLLLEMFSGELSWSADSIRLQISNPDLKDHMVEQFKELHHIWQSQQRLQPMVQAPPVA
GLGAGQGPWPMHPVGMQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccagccccaggggttgccccaccaccacgccgtgtgaggctgaagccctgg
ttggtggcccaggtgaacagctgccagtacccagggcttcagtgggtcaatggggaaagg
aaactcttctatatcccctggcgtcatgccacaaggcatggtcccagccaggatggagac
aacaccatcttcaaggcctgggctcaagagacagggaagtacaccgagggggtggacgag
gctgacccagccaagtggaaggccaacctgcgctgcgcgcttaacaaaagccgtgacttc
cgtctgttctacgacggccctcgagacatgccacctcagccctacaagatctacgaggtc
tgctccaatggccctgctcccacagagtcccagcccactgatgagtacattcctggagaa
gacgaggaggaggaagaggaagagctccagagaatgttgccaagcctgaccatcacagat
cctgtgctacctgggcctcccatagcaccctactccttacccaaagaaggcgtcaagtgg
ccacctgctctccagccatctgtagggctgggtcacccagccccagatccaaatctcctg
gcccctccctctggaaaccctgctggcttcaggcagcttctccctgaggacctggagcct
ggaccgctggctcccagccagccccctccagaacaactcttgcctgacctgctcatcagc
ccccacatgctgcctttgactgacctggagatcaagttccagtaccgtggtcgtccacct
cgtgccctcaccatcagcaacccacaaggctgtaggctcttctatagccagctagaggct
acccaggaacaagtggaactctttggccctgtgagcctggagcaagtgcgcttccctagc
ccggaggagatccccagcgacaagcagcgtttctatacaaaccagctgctagacgtcctg
gaccgtgggctcatcctccagctgcagggccaggacctgtatgccatccgtctgtgccag
tgtaaggtgttctggagtggaccctgcgccttagccaatggctcacgccccaaccccatc
cagcgagaagtcaagacaaagctctttagcctagagcagtttctcaatgaactcatcctg
ttccagaagggtcagaccaacactccaccaccttttgagatcttcttctgctttggagaa
gaatggcctgacctcaagccccgagagaagaagctcattactgtacaggtggtacctgtt
gcagcccggttgctgctggagatgttctctggggagctttcctggtcagcagacagcatc
cggctgcagatctcaaacccagatctcaaagaccacatggtggagcagttcaaagagctc
catcacatctggcagtcccagcagcggttgcagcccatggtccaggcccctcctgtggcg
ggccttggtgctggccaagggccctggcccatgcacccagttggcatgcagtaa
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