Peromyscus leucopus (white-footed mouse): 114698311
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Entry
114698311 CDS
T07241
Symbol
Trpc5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04360
Axon guidance
pleu04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
114698311 (Trpc5)
09158 Development and regeneration
04360 Axon guidance
114698311 (Trpc5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pleu01009
]
114698311 (Trpc5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pleu04040
]
114698311 (Trpc5)
Protein phosphatases and associated proteins [BR:
pleu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114698311 (Trpc5)
Ion channels [BR:
pleu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114698311 (Trpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
Motif
Other DBs
NCBI-GeneID:
114698311
NCBI-ProteinID:
XP_028732745
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All DBs
Position
X:complement(97420970..97682663)
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AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSTSSAEFSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGAPLIRTMPRASDAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGQTSEPTPEPMYTISDGIAQQHYMWQDIRYSQMEKGKAEACSQSEM
NLSEVELGEIRGAARSSECPLACSSSLHCASGICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgtactacaagaaggtcaattactcaccgtacagagaccgaatccccctc
caaattgtgagggctgagactgagctctctgctgaagagaaggccttccttaatgctgtg
gagaagggggactatgccactgtgaagcaggcactacaagaggccgagatctactacaat
gtcaacatcaactgcatggatcctttgggcaggagtgccctgctcattgccattgagaat
gagaacttggagatcatggagctactgctgaatcacagtgtgtatgtgggcgatgcacta
ctctatgccatccgcaaggaagtggtgggcgctgtggagcttctgcttagctacaggaag
cccagtggagagaagcaggttcccaccctgatgatggacacccagttctctgagttcaca
ccagatatcactcccattatgttggccgcccacaccaacaactatgaaatcatcaaattg
cttgtccaaaagcgggtcactatcccacggcctcaccaaatccgctgcaactgcgtagag
tgtgtgtccagttcggaagtagacagcctgcgtcattcaaggtcccgactgaacatctac
aaagctctggcaagcccctcactcattgccttatcaagcgaggaccccatccttactgct
ttccggctgggctgggaactcaaggagctaagcaaggtggaaaatgagtttaaggctgag
tatgaggagctctcccagcaatgtaagctctttgccaaggacctgctggaccaagctcgg
agctcccgagaactggagatcatcctcaaccatcgagacgaccacagtgaagaacttgac
ccacagaagtaccacgacctggccaagctgaaggtggcaatcaaatatcaccagaaagag
tttgtcgctcagccaaactgccaacaattgcttgccaccttgtggtatgatggcttccct
ggatggcggagaaaacactgggtagtcaagcttctgacctgcatgaccattggcttcctg
tttcctatgctgtctatagcctatctgatctcacccagaagcaaccttgggctgttcatc
aagaagccctttatcaagttcatctgccatacagcttcctatctgaccttcctcttcatg
cttctcctggcttctcagcatattgtcaggacagacctccatgtacaaggacctccccca
actgttgtggaatggatgatactgccttgggttctaggtttcatttggggggagataaag
gaaatgtgggatggtggattcactgaatacatccatgactggtggaacttaatggatttc
gcaatgaactccctctacctggcaactatttccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaggaatgggaaatgtggcacccgactctgattgcagaggca
ctcttcgcaatatccaacattttaagttccttgcgtctcatatccttgttcacagccaac
tcccacttagggcctctgcagatctctttgggacgcatgctgcttgatatcctcaaattc
ctctttatctactgcctagtactgctggcttttgccaatggactgaaccagctttatttt
tactatgagaccagagctatcgatgaacctaacaactgcaaggggatccggtgtgaaaaa
cagaacaatgccttctccacgctctttgaaacccttcagtcactcttctggtctgtattt
ggccttttaaatctctatgtcactaatgtgaaggccagacacgagttcaccgagtttgtg
ggagcgactatgtttgggacatacaacgtgatctccctggtagtgctgctgaacatgctc
attgccatgatgaacaactcctaccagcttattgccgatcacgctgacattgagtggaag
tttgcaagaacgaagctctggatgagttactttgatgaaggtggtaccttgccacctcct
ttcaacattatccccagccccaaatcattcctctatcttggcaactggttcaacaacacc
ttctgtcccaaaagagaccccgatggaagacgaaggaggcacaacttgagaagcttcaca
gaacgccatgctgatagcttgatacaaaatcaacattatcaggaagttatcagaaattta
gtcaagagatatgtggctgcaatgataagaaactctaaaacaaatgaggggctaacagaa
gaaaattttaaggaattaaagcaggacatctccagctttcgatatgaagtgcttgacctc
ttgggaaacagaaaacatccaagaagaagcttttccactagcagcgctgaattctctcaa
agagatgataccaatgatggcagtggtggggctcgggccaaatctaagagtgtctctttc
aatttaggctgcaagaaaaaggcctgccacggggcacctctcatcagaaccatgccaaga
gccagtgatgctcaaggaaagtcaaaagctgagtcatcaagcaaacggtccttcatgggt
ccctctctcaagaaactgggtctcctgttctccaagtttaacggtcagacctctgaacct
actccagagcccatgtacacaatctccgatgggatcgcacagcagcattatatgtggcag
gacatcagatattcgcagatggagaaagggaaggcagaggcctgttctcaaagtgaaatg
aacctcagtgaggtagagttaggtgaaatccggggtgctgctcggagcagtgaatgcccc
ctagcctgttccagctctcttcactgtgcatccggcatttgctcctcaaattctaaactt
ttagactcctcagaggatgtatttgaaacttggggagaggcttgcgacttgctcatgcac
aaatggggtgatggacaggaagaacaagttacaactcggctctaa
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