Peromyscus leucopus (white-footed mouse): 114699417
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Entry
114699417 CDS
T07241
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04140
Autophagy - animal
pleu05014
Amyotrophic lateral sclerosis
pleu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114699417 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114699417 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
114699417 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114699417 (C9orf72)
Membrane trafficking [BR:
pleu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
114699417 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
114699417
NCBI-ProteinID:
XP_028734328
LinkDB
All DBs
Position
2:complement(47415450..47445588)
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AA seq
481 aa
AA seq
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MSTICPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LGFYLPLHRVCVDRLTHIIRKGRIWMHKERQESVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLASMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVKTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactatctgcccaccgccatctcctgctgtagccaagacagagattgctttaagt
ggtgaatcaccgttgttggcagctacctttgcttactgggataatattctcggtcctaga
gtaaggcacatttgggctccaaagacagaacaggtacttctcagtgatggagaaataact
tttcttgccaaccacactctaaatggagaaattcttcgaaatgcagagagtggggctata
gatgtaaagttctttgtcttgtctgaaaaaggagtaattatcgtttcattgatcttcgac
ggaaactggaatggagatcggagcacttacggactatcaattatacttccgcagacagaa
cttggtttctacctcccacttcatagggtgtgtgttgacagattaacacacatcattcgc
aaaggaaggatatggatgcataaggaaagacaagaaagtgtccagaaaattgtcctggaa
ggcacagagagaatggaagatcagggtcagagtatcattcccatgcttactggggaagtc
attcctgtgatggagctgcttgcatctatgaagtcacacagtgtccccgaagaaattgat
atagccgataccgtgctcaatgacgatgacattggggacagctgtcacgaaggctttctt
ctcaacgccatcagctcccacctgcagacctgtggctgttctgtcgtggtgggcagcagt
gcagagaaagtaaataagatagtgaaaacgctgtgcctttttctgactccagcagagagg
aaatgctccaggctgtgtgaagcagaatcatcctttaaatatgaatcaggactctttgta
caaggcctgctaaaggatgcgacaggaagcttcgtcctacccttccggcaggttatgtat
gctccatatccaaccacgcacattgatgtggatgtcaatactgtcaagcagatgccacca
tgtcatgaacatatttataatcaacgcagatacatgagatcagaactgacagccttctgg
agggcaacttcagaagaggacatggctcaggacaccatcatctacacagatgaaagcttc
actcctgatttgaatattttccaagatgtcttacacagagatactctagtgaaagccttc
ctggatcaggtcttccatttgaaacctggcctgtctctcaggagcactttccttgcccag
ttcctactggttcttcacagaaaagccttgacactaatcaaatacatagaggacgatacg
cagaaggggaaaaagccctttaaatctcttcggaacctgaagatagatcttgatttaaca
gcagagggcgatcttaacataataatggctctagctgagaaaattaagccaggcctacac
tctttcatctttgggagacctttctacactagtgtacaagaacgtgatgttctaatgact
ttttaa
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