KEGG   Peromyscus leucopus (white-footed mouse): 114700550
Entry
114700550         CDS       T07241                                 
Symbol
Apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu01524  Platinum drug resistance
pleu04115  p53 signaling pathway
pleu04210  Apoptosis
pleu04215  Apoptosis - multiple species
pleu05010  Alzheimer disease
pleu05012  Parkinson disease
pleu05014  Amyotrophic lateral sclerosis
pleu05016  Huntington disease
pleu05020  Prion disease
pleu05022  Pathways of neurodegeneration - multiple diseases
pleu05134  Legionellosis
pleu05152  Tuberculosis
pleu05160  Hepatitis C
pleu05161  Hepatitis B
pleu05162  Measles
pleu05164  Influenza A
pleu05168  Herpes simplex virus 1 infection
pleu05169  Epstein-Barr virus infection
pleu05200  Pathways in cancer
pleu05222  Small cell lung cancer
pleu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    114700550 (Apaf1)
   04215 Apoptosis - multiple species
    114700550 (Apaf1)
   04115 p53 signaling pathway
    114700550 (Apaf1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    114700550 (Apaf1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    114700550 (Apaf1)
  09172 Infectious disease: viral
   05161 Hepatitis B
    114700550 (Apaf1)
   05160 Hepatitis C
    114700550 (Apaf1)
   05164 Influenza A
    114700550 (Apaf1)
   05162 Measles
    114700550 (Apaf1)
   05168 Herpes simplex virus 1 infection
    114700550 (Apaf1)
   05169 Epstein-Barr virus infection
    114700550 (Apaf1)
  09171 Infectious disease: bacterial
   05134 Legionellosis
    114700550 (Apaf1)
   05152 Tuberculosis
    114700550 (Apaf1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    114700550 (Apaf1)
   05012 Parkinson disease
    114700550 (Apaf1)
   05014 Amyotrophic lateral sclerosis
    114700550 (Apaf1)
   05016 Huntington disease
    114700550 (Apaf1)
   05020 Prion disease
    114700550 (Apaf1)
   05022 Pathways of neurodegeneration - multiple diseases
    114700550 (Apaf1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    114700550 (Apaf1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    114700550 (Apaf1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 NB-ARC APAF1_C WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd APAF-1-like_WHD Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th CARD Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_NUP159_NUP214 WD40_like Beta-prop_HPS5 eIF2A Beta-prop_WDR35_TULP_N RMC1_N WD40_RFWD3 Beta-prop_WDR11_2nd PEP5_VPS11_N CARD_2 Beta-prop_DCAF4 Ge1_WD40 Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_DCAF12 KNTC1_N AAA_16 Utp8_b_propeller NPHP3_N AAA_22 NACHT AAA_18 ATPase_2 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 114700550
NCBI-ProteinID: XP_028736051
LinkDB
Position
18:38501916..38586185
AA seq 1249 aa
MDAKARNCLLQHREALEKDIKTSYIMDHMISDSVLTIVEEEKVKSQTTQYQRAAALITMI
LNKDNGAYISFYNALLHEGYKDLAALLHSGLPLVSSSSGKDTDGGITSFVRTVLCEGGVP
QRPVVFVTRKKLVNAIQQKLWKLNGDPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFPG
GVHWVSVGKQDKSGLLMKLQNLCTRLDQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLL
ILDDIWDPWVLKAFDNQCRILLTTRDKSVTDSVMGPKYVVSVESGLGKEKGLEILSLFVN
MKKEDLPVEAHSIIKECKGSPLVVSLIGALLRDFPNRWAYYLRQLQNKQFKRIRKSSFYD
YEALDEAMSISVDMLREDIKDYYTDLSILQKDVKVPTKVLCILWDLETEEVEDILQEFVN
KSLLFCDRNGKSFCYYLHDLQVDFLTEKNRSQLQDLHRKMVTQFQRYYQPNTLSPDQEDC
MYWYNFLAYHMASANMHKELCALLFSLDWIKAKTELVGPAHLIHEFVEYSHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDSGRLYLEWVNK
KTVKNLSRLVVRPHTDAVYHACFSQDGQRVASCGADRTVQVFKAETGEKLLEIKAHEDEV
LCCAFSSDDSYIATCSVDRKVKVWDSVTGKLVHTYDEHSEQVNCCHFTNKSNQLLLATGS
NDFFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDELLASCSADGTLKLWDVRSANEKQS
INVKRFFLSSEDPQEDVEVIVKCCSWSADGTEIIVAAKNKILLFDIHTSGLLAEIPTGHH
STIQYCDFSPYDRLAVVALSQYCVELWNIDSHLKVADCRGHLSWVHGVMFSPDGSSFLTA
SDDQTIRVWETKKVCKNSAVVLKQEIDVVFQENEAMVLAVDNIRGLQLIAGKTGQIDYLP
EAQVSCCCLSPHLEYVAFGDEDGAIKVIELPNNRVFSSRIGHKKAVRHIQFTADGKTLIS
SSEDSVIQVWNWQSEGYIFLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITGRIEKD
FICHQGTVLSCDISSDATKFSSTSADKTAKIWSFELLSPLHELKGHTGCVRCSAFSLDGI
LLATGDDNGEIRMWNVSNGQLLHLCAPLSVEEGTATHGGWVTDLCFSPDSRTLVSAGGYL
KWWNVVTGECSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVLE
NT seq 3750 nt   +upstreamnt  +downstreamnt
atggatgcaaaggcccggaattgtttgcttcaacatagagaagctctggagaaggacatc
aagacgtcctacatcatggaccacatgatcagtgacagcgttttaacaatagtcgaggag
gaaaaggtgaaaagtcagaccactcaatatcagcgagcggctgctttaattacgatgata
cttaataaagacaacggggcctacatttcattctacaatgctctgctccatgagggatac
aaagaccttgctgcccttcttcacagtggccttcctcttgtgtcttcttccagtggcaaa
gacacggatggcggaatcacttcattcgtaaggactgtgctgtgtgaaggtggagtacca
cagaggccagttgtttttgttactagaaagaagctggtaaatgcgattcagcagaagctc
tggaaattgaatggtgatccagggtgggtcaccatatatggaatggcaggctgtgggaag
tctgtattagctgcggaagctgttcgagatcattccctcttagaaggttgtttcccgggg
ggtgtacactgggtttcagttggaaaacaagacaaatctggacttctgatgaaactgcag
aatctttgcacacggttggatcaggaagagagcttctctcagaggcttccgcttaatatc
gaggaggctaaagaccgtctccgtgttctgatgctgcgcaaacacccaaggtctctgttg
atcctggatgatatttgggatccttgggtgttaaaagctttcgacaaccagtgtcgtatt
cttcttacaaccagagataagagtgttacagattcggtaatgggtcctaagtatgttgtc
tctgtggagagtggcctagggaaagagaagggacttgaaatcttgtcgctttttgttaac
atgaagaaagaagatttgccggtggaggctcacagtattataaaagaatgcaaaggttcc
cctcttgtggtgtctttaattggtgcacttttacgtgattttcccaatcgctgggcgtac
tacctcagacaacttcagaataagcagtttaagagaatacggaagtcctccttttatgat
tatgaggctctggatgaagccatgtctataagtgttgacatgctcagagaagacatcaaa
gattattacacagatctttccatcctgcagaaggacgtcaaggtccctacaaaggtgtta
tgtattctctgggacttggaaaccgaagaagttgaagacatattgcaggagtttgttaat
aagtctctcttattctgtgatcggaatggaaagtcattttgttattatttacatgatctt
caagtagattttctgacagagaagaatcgaagtcagctccaggatctgcacaggaagatg
gtcactcaatttcagaggtattaccagcccaacactctgtctccagatcaggaggactgc
atgtattggtacaacttcctagcttatcacatggccagtgccaatatgcacaaagaactt
tgtgctttattgttttccctggattggattaaagcaaaaacggaacttgttggccctgcc
catctgatccatgagtttgtggaatacagtcatatattggatgaaaaggactgtgcagtt
tgtgagaattttcaagagtttttatccttaaatggacaccttcttggacggcagccattt
cctaatattgtacagctgggcctctgtgaaccagaaacttcggaagtttatcaacaagca
aagctacaggccaagcaggaggtggacagtggaaggctttacctggagtgggtaaacaag
aaaactgtcaagaacctctcccgcttagttgtccgcccccacacagatgctgtttaccat
gcatgcttttctcaggacggtcagagagtagcttcttgtggagctgatagaactgtacag
gtgttcaaagctgagacaggagagaaacttctggaaatcaaagctcatgaggatgaagtg
ctttgctgtgcattctcctcagatgacagttacatagcgacctgctcggtggacagaaaa
gttaaggtctgggattctgtgaccgggaagctggtgcacacctatgacgagcactcggag
caagtcaactgctgccacttcaccaacaaaagtaaccagcttctcctggccaccggctca
aatgacttcttcctcaaactctgggatctaaatcaaaaagaatgccgaaacaccatgttt
ggtcacaccaactcagtcagccactgcaggttctccccagacgatgagctcctggctagt
tgctcggctgatggaacattaaagctttgggatgtgagatcagcaaatgagaagcaaagc
atcaatgtgaagcggttcttcctgagttcagaagaccctcaagaggatgtggaagtgata
gtgaaatgttgctcctggtccgcagatggcactgaaataatagtggcagcaaaaaacaaa
atcctcctttttgatatccacactagtggcctgttggcagagatccccacaggccaccac
agcaccatccagtactgtgacttctccccctatgaccgtctggccgtggttgctctgtcc
cagtactgtgtggagttgtggaatatagattcacatttaaaggtagctgactgcagagga
catttaagttgggttcacggtgtgatgttttctcctgatgggtcatcatttttgacagct
tctgatgaccaaacaatacgggtctgggagaccaagaaggtgtgcaagaactctgccgta
gtgttaaagcaggaaatagatgttgtgtttcaagaaaatgaagccatggtcctcgcagtt
gacaacataagaggcctacaactcattgctggaaaaacaggccagattgattacctgccc
gaagctcaagtgagttgctgttgcctaagtccacatcttgagtatgttgcatttggagat
gaagatggagccattaaggttatagaacttccaaacaacagagttttcagttctaggatt
ggacataagaaagctgtgcggcacatccagttcacagctgatgggaagaccctgatttca
agttctgaggattctgtgattcaggtgtggaattggcagtcagagggttatatctttttg
caagcccatcaggaaacagtgaaggacttcagactcctgaaaaactcaagattgctttct
tggtcctttgatggaacggtgaaggtatggaatatcattactggaagaatagaaaaagac
tttatttgccatcagggtacagtgctttcttgtgatatttcttctgatgctaccaagttt
tcatcaacctctgctgataagactgcaaagatctggagttttgaactgctctcccctctt
catgagttgaagggtcatactggctgtgtccgctgctctgccttctctctggatggcatc
ctgctggcaaccggagacgacaatggagaaatcaggatgtggaatgtctcaaatggccag
cttcttcacttgtgtgctccgctttcagtagaagaaggaactgctacccacggaggctgg
gtgactgatctgtgcttctctcccgacagcagaacgcttgtctctgctggaggatatctt
aagtggtggaatgttgtcactggggaatgctcacagaccttctacaccaacggaacaaac
ctcaagaagatacatgtgtcccctgacttccggacatacgtgactgttgataaccttggt
attttatatattttacaggttttagagtaa

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