Peromyscus leucopus (white-footed mouse): 114702243
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Entry
114702243 CDS
T07241
Symbol
Eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114702243 (Eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pleu03041
]
114702243 (Eftud2)
Spliceosome [BR:
pleu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
114702243 (Eftud2)
Complex C
U5 SnRNP specific factors
114702243 (Eftud2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
114702243
NCBI-ProteinID:
XP_028738462
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All DBs
Position
8b:89562404..89607577
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDEDEDEDDVGEHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgaatttgggaattacattggaccagagcttgattctgat
gaagatgatgatgaactgggaagagagacaaaagatcttgatgagatggatgaggatgag
gatgaggatgacgtgggagagcacgatgatgaccaccctggcatggaggtggtgctgcac
gaagacaagaagtactaccccacagctgaggaggtgtacggccctgaggtggagaccata
gttcaggaggaagacactcagcctctcacagagcccattataaagccagtgaaaaccaag
aaattcactctgatggagcagacattacctgtcacggtgtatgagatggatttcttagca
gatctgatggacaactcagagctcatccgaaacgtgaccctttgtggccatctccaccac
ggcaagacgtgttttgtagattgcttaatagagcagacacatccggaaatcagaaaacgc
tatgaccaagatctgtgctataccgacatcctcttcacagagcaagagagaggtgttggc
atcaagagcactccggtgacagtggtgctgccggacaccaaagggaagtcttacctcttc
aacatcatggacacaccaggacatgtgaatttttctgatgaggtcacagctggcttgcgc
atctcggatggagtggtccttttcattgatgctgctgagggggtgatgctgaacacagaa
cgactgatcaagcatgcagtgcaggaaaggttagcagtcaccgtgtgcatcaacaaaatc
gaccggctgatcttggagctgaagctgcctccaacagatgcttattacaaacttcgacac
attgtggatgaggtcaatggattaataagcatgtattccaccgatgagaacctgatcctt
tccccgctcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactg
ggctcctttgccaagatctatgctgacacctttggtgacattaattaccaggaatttgct
aaaagactctggggtgacatctacttcaatcctaagacgagaaagttcacaaaaaaggct
ccaaccagcagctcccagaggagctttgtggagtttatcttggagcctctttataaaatc
cttgctcaggtggtgggtgatgtggacactagcctgccaaggaccctggacgaacttggc
atccaccttaccaaggaggagctaaagctgaacatccgccctctgctcaggctggtctgc
aaaaagttctttggcgagttcacaggctttgtggacatgtgtgtacagcacattccatct
ccaaaagtgggcgccaaacccaagattgagcatacctacactggcggtgtggactccgac
cttggcgaggccatgagtgactgtgacccagatggtcccctgatgtgccacactactaag
atgtacagcacagacgatggagttcagttccatgcctttggccgggtgctgagcggcacc
atccatgctgggcagcctgtgaaggtgctgggggagaactacactctggaagatgaggaa
gactcccagatatgtactgtgggccgcctttggatctccgtcgccaggtaccacattgag
gtgaatcgtgttcctgctggcaactgggttctgattgaaggtgttgatcagccgatcgtg
aagacagcgactataactgaaccccgaggcaatgaggaggctcagattttccggcctttg
aaattcaataccacatctgttatcaagattgctgtggagccggtcaacccctcagagcta
cccaagatgcttgacggcctgcgcaaggtcaacaagagctacccatcgctcaccaccaag
gtagaagagtctggtgagcatgtgatcctgggcactggggagctctacctggactgtgtg
atgcacgatctgcggaagatgtactcagagatcgacatcaaggtggctgacccagttgtg
acattctgtgagacagtggtagaaacatcctccctcaaatgctttgctgaaacacccaat
aagaagaacaagatcaccatgattgctgagcctcttgagaagggcctggccgaggacata
gagaatgaagtggtccagatcacctggaacaggaaaaagctgggagagttcttccaaaca
aagtatgactgggatctgctggctgcccgttccatctgggcctttggtcctgatgctaca
ggaccaaacatcctagtggacgacacattgccctcagaggtggacaaggcacttctgggc
tcagtgaaagacagcattgttcaaggtttccagtggggaactagggaggggccgctctgc
gatgaactgattcggaatgtcaagtttaagatcctggatgcagtggttgcccaggaaccc
ctccatcggggtggaggccagatcatccctacagccaggcgggtagtctactctgccttc
ctcatggccactcctcgtctgatggagccttactactttgtagaggtccaggcccctgca
gactgtgtgtctgctgtttacacagtcctggccaggcgcagagggcatgtgactcaggac
gcacccatcccaggctcccctctctacacaatcaaagctttcatcccagccatcgactct
ttcggcttcgagactgatctccgcactcatacccaggggcaggccttttccctgtctgtc
ttccaccattggcagattgtgcctggtgatcctctggacaagagcattgtcatccgcccc
ttggagccccagccagctcctcacctggcccgggagttcatgatcaaaacccgtcgtagg
aagggcctgagtgaagatgtgagcatcagcaagttcttcgatgatcctatgttgctagaa
ctcgccaaacaggacgttgtactcaattaccccatgtga
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