KEGG   Peromyscus leucopus (white-footed mouse): 114705817
Entry
114705817         CDS       T07241                                 
Symbol
Tnf
Name
(RefSeq) tumor necrosis factor
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu01523  Antifolate resistance
pleu04010  MAPK signaling pathway
pleu04060  Cytokine-cytokine receptor interaction
pleu04061  Viral protein interaction with cytokine and cytokine receptor
pleu04064  NF-kappa B signaling pathway
pleu04071  Sphingolipid signaling pathway
pleu04150  mTOR signaling pathway
pleu04210  Apoptosis
pleu04217  Necroptosis
pleu04350  TGF-beta signaling pathway
pleu04380  Osteoclast differentiation
pleu04612  Antigen processing and presentation
pleu04620  Toll-like receptor signaling pathway
pleu04621  NOD-like receptor signaling pathway
pleu04622  RIG-I-like receptor signaling pathway
pleu04625  C-type lectin receptor signaling pathway
pleu04640  Hematopoietic cell lineage
pleu04650  Natural killer cell mediated cytotoxicity
pleu04657  IL-17 signaling pathway
pleu04660  T cell receptor signaling pathway
pleu04664  Fc epsilon RI signaling pathway
pleu04668  TNF signaling pathway
pleu04920  Adipocytokine signaling pathway
pleu04930  Type II diabetes mellitus
pleu04931  Insulin resistance
pleu04932  Non-alcoholic fatty liver disease
pleu04933  AGE-RAGE signaling pathway in diabetic complications
pleu04936  Alcoholic liver disease
pleu04940  Type I diabetes mellitus
pleu05010  Alzheimer disease
pleu05014  Amyotrophic lateral sclerosis
pleu05020  Prion disease
pleu05022  Pathways of neurodegeneration - multiple diseases
pleu05132  Salmonella infection
pleu05133  Pertussis
pleu05134  Legionellosis
pleu05135  Yersinia infection
pleu05140  Leishmaniasis
pleu05142  Chagas disease
pleu05143  African trypanosomiasis
pleu05144  Malaria
pleu05145  Toxoplasmosis
pleu05146  Amoebiasis
pleu05152  Tuberculosis
pleu05160  Hepatitis C
pleu05161  Hepatitis B
pleu05163  Human cytomegalovirus infection
pleu05164  Influenza A
pleu05165  Human papillomavirus infection
pleu05166  Human T-cell leukemia virus 1 infection
pleu05168  Herpes simplex virus 1 infection
pleu05169  Epstein-Barr virus infection
pleu05170  Human immunodeficiency virus 1 infection
pleu05171  Coronavirus disease - COVID-19
pleu05205  Proteoglycans in cancer
pleu05310  Asthma
pleu05321  Inflammatory bowel disease
pleu05322  Systemic lupus erythematosus
pleu05323  Rheumatoid arthritis
pleu05330  Allograft rejection
pleu05332  Graft-versus-host disease
pleu05410  Hypertrophic cardiomyopathy
pleu05414  Dilated cardiomyopathy
pleu05417  Lipid and atherosclerosis
pleu05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    114705817 (Tnf)
   04350 TGF-beta signaling pathway
    114705817 (Tnf)
   04064 NF-kappa B signaling pathway
    114705817 (Tnf)
   04668 TNF signaling pathway
    114705817 (Tnf)
   04071 Sphingolipid signaling pathway
    114705817 (Tnf)
   04150 mTOR signaling pathway
    114705817 (Tnf)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    114705817 (Tnf)
   04061 Viral protein interaction with cytokine and cytokine receptor
    114705817 (Tnf)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    114705817 (Tnf)
   04217 Necroptosis
    114705817 (Tnf)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    114705817 (Tnf)
   04620 Toll-like receptor signaling pathway
    114705817 (Tnf)
   04621 NOD-like receptor signaling pathway
    114705817 (Tnf)
   04622 RIG-I-like receptor signaling pathway
    114705817 (Tnf)
   04625 C-type lectin receptor signaling pathway
    114705817 (Tnf)
   04650 Natural killer cell mediated cytotoxicity
    114705817 (Tnf)
   04612 Antigen processing and presentation
    114705817 (Tnf)
   04660 T cell receptor signaling pathway
    114705817 (Tnf)
   04657 IL-17 signaling pathway
    114705817 (Tnf)
   04664 Fc epsilon RI signaling pathway
    114705817 (Tnf)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    114705817 (Tnf)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    114705817 (Tnf)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    114705817 (Tnf)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    114705817 (Tnf)
   05170 Human immunodeficiency virus 1 infection
    114705817 (Tnf)
   05161 Hepatitis B
    114705817 (Tnf)
   05160 Hepatitis C
    114705817 (Tnf)
   05171 Coronavirus disease - COVID-19
    114705817 (Tnf)
   05164 Influenza A
    114705817 (Tnf)
   05168 Herpes simplex virus 1 infection
    114705817 (Tnf)
   05163 Human cytomegalovirus infection
    114705817 (Tnf)
   05169 Epstein-Barr virus infection
    114705817 (Tnf)
   05165 Human papillomavirus infection
    114705817 (Tnf)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    114705817 (Tnf)
   05135 Yersinia infection
    114705817 (Tnf)
   05133 Pertussis
    114705817 (Tnf)
   05134 Legionellosis
    114705817 (Tnf)
   05152 Tuberculosis
    114705817 (Tnf)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    114705817 (Tnf)
   05144 Malaria
    114705817 (Tnf)
   05145 Toxoplasmosis
    114705817 (Tnf)
   05140 Leishmaniasis
    114705817 (Tnf)
   05142 Chagas disease
    114705817 (Tnf)
   05143 African trypanosomiasis
    114705817 (Tnf)
  09163 Immune disease
   05310 Asthma
    114705817 (Tnf)
   05322 Systemic lupus erythematosus
    114705817 (Tnf)
   05323 Rheumatoid arthritis
    114705817 (Tnf)
   05321 Inflammatory bowel disease
    114705817 (Tnf)
   05330 Allograft rejection
    114705817 (Tnf)
   05332 Graft-versus-host disease
    114705817 (Tnf)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    114705817 (Tnf)
   05014 Amyotrophic lateral sclerosis
    114705817 (Tnf)
   05020 Prion disease
    114705817 (Tnf)
   05022 Pathways of neurodegeneration - multiple diseases
    114705817 (Tnf)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    114705817 (Tnf)
   05418 Fluid shear stress and atherosclerosis
    114705817 (Tnf)
   05410 Hypertrophic cardiomyopathy
    114705817 (Tnf)
   05414 Dilated cardiomyopathy
    114705817 (Tnf)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    114705817 (Tnf)
   04940 Type I diabetes mellitus
    114705817 (Tnf)
   04936 Alcoholic liver disease
    114705817 (Tnf)
   04932 Non-alcoholic fatty liver disease
    114705817 (Tnf)
   04931 Insulin resistance
    114705817 (Tnf)
   04933 AGE-RAGE signaling pathway in diabetic complications
    114705817 (Tnf)
  09176 Drug resistance: antineoplastic
   01523 Antifolate resistance
    114705817 (Tnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:pleu04052]
    114705817 (Tnf)
   00536 Glycosaminoglycan binding proteins [BR:pleu00536]
    114705817 (Tnf)
Cytokines and neuropeptides [BR:pleu04052]
 Cytokines
  Tumor necrosis fators
   114705817 (Tnf)
Glycosaminoglycan binding proteins [BR:pleu00536]
 Heparan sulfate / Heparin
  Cytokines
   114705817 (Tnf)
SSDB
Motif
Pfam: TNF DUF956
Other DBs
NCBI-GeneID: 114705817
NCBI-ProteinID: XP_028743766
LinkDB
Position
16_21:7755189..7757784
AA seq 235 aa
MSTESMIRDVELAEEALPKKAWGPQNSSRCLCLSLFSFLLVAGATTLFCLLNFGVIGPQR
EEKFPNNLPIIGSMAQTLTLRSSSQNSSDKPVAHVVANHQVDEQLEWLSRRANALLANGM
DLKDNQLVIPADGLYLVYSQVLFKGQGCSNYVLLTHTVSRFAVSYEDKVNLLSAIKSPCP
KETPEGSELKPWYEPIYLGGVFQLEKGDRLSAEVNLPKYLDFAESGQVYFGVIAL
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcacagaaagcatgatccgcgacgtagaactggcagaggaggcactccccaaaaag
gcgtggggcccccagaactccagtcggtgcctgtgcctcagcctcttctccttcctgctc
gtggcaggggccaccacgctcttctgtctgctgaattttggggtgatcggcccccaaagg
gaagagaagttccccaacaacctccccatcatcggctccatggcccagaccctcacactg
agatcatcttctcaaaattcgagtgacaagcctgtagcccacgttgtagcaaaccaccaa
gtggatgagcagctggagtggctgagccggcgagccaatgccctcctggccaacggcatg
gatctcaaagacaaccagctggtgattccagcagacgggctgtacctcgtctactcccag
gtgctcttcaagggccaaggctgctccaactatgtgctgctcacccacaccgtcagccgc
tttgctgtctcttacgaggacaaagtcaacctcctgtctgccatcaagagcccctgcccc
aaggaaacccccgaggggtctgagctcaagccctggtacgagcccatctacttgggaggg
gtcttccagctggagaagggagaccgactgagtgccgaggtcaatctgcccaaataccta
gactttgcagaatccgggcaggtctacttcggagtcattgctctgtaa

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