Peromyscus leucopus (white-footed mouse): 114706889
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Entry
114706889 CDS
T07241
Symbol
Slit1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04360
Axon guidance
pleu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
114706889 (Slit1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
114706889 (Slit1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pleu00536
]
114706889 (Slit1)
Glycosaminoglycan binding proteins [BR:
pleu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
114706889 (Slit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
EGF
Laminin_G_2
Laminin_G_1
LRRNT
hEGF
LRRCT
LRR_1
LRR_9
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_Teneurin
EGF_3
LRR_EndoS
FNIP
Motif
Other DBs
NCBI-GeneID:
114706889
NCBI-ProteinID:
XP_028745248
LinkDB
All DBs
Position
1:complement(48309261..48464494)
Genome browser
AA seq
1531 aa
AA seq
DB search
MALKLQRGSSLGLSRPELWLLLWAAAWRLGATACPALCTCTGTTVDCHGTGLQAIPKNIP
RNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQ
LHVLPELLFQNNQALSRLDLSENVLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL
RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT
QCSGPASLRGLNVAEVQKSEFSCSGQGEATRVPTCTLSSGSCPAMCTCSSGIVDCRGKGL
TAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLN
SLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLKLSKIPERIPQ
STAELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGASSVSELHLTANQ
LESIRSGMFRGLDGLRTLMLRNNHISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTL
QALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE
EGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH
GNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPDME
GKLLLTTPAKKFECQGPPSLAVQAKCEPCLSSPCRNQGTCHSDALEVYRCTCPSGYKGRD
CEVSLDSCSSNPCGNGGTCHTHEGEDAGFSCSCPAGFEGPTCGVNTDDCVKHACVNGGVC
VDGVGNYTCQCPLQYTGRACEQLVDFCSPDLNPCQHEAQCVGTLDGPRCECVPGYTGTNC
SENQDDCEGHRCQNGAQCVDEVNSYACRCAEGYSGQLCEIPPAPRSPCEGTECQNGANCV
DQGSRPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL
LYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNLSID
GGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYINNEL
QDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWGGLHCDQPVDGPCHG
HKCVHGKCVPLDALAYSCQCQDGYSGALCNQVGAVAEPCGGLQCQHGHCQASATKGAHCV
CNPGFSGELCEQESECRGDPVRDFHRVQRGYAICQTTRPLSWVECRGACPGQGCCRGLRL
KRRKLTFQCSDGTSFAEEVEKPTKCGCAQCA
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaagctccagcgcgggtcctctttggggctgagccgaccggagctgtggttg
ctgctgtgggcagccgcgtggcgcctgggggccacggcgtgccccgccctctgcacctgc
accggcaccaccgtggactgccatggcactgggttacaggccatccccaagaacatccca
cggaacaccgagcgcttagagctcaatggcaacaatatcactcggatccataagaatgac
ttcgctgggctcaagcagcttcgagtgctgcagctgatggagaaccagattggagccgtg
gaacgcggagcttttgatgacatgaaggagttggagcggctacgactgaaccgcaaccag
ctgcacgtactgcctgaactactgttccagaacaaccaagctctatctcgactggacctg
agtgagaatgtcctccaggctgtgcccaggaaggctttccggggagccacagacctcaaa
aatctacagctggacaagaaccagatcagctgtatcgaggaaggggccttccgtgccctg
cggggactagaggttctgacactgaacaacaacaacatcaccaccatccccgtgtccagc
ttcaaccacatgcctaagcttcggaccttccgactgcactccaaccacctgttctgtgac
tgtcacctggcctggctctcgcagtggctgaggcagaggcccaccatcgggctcttcacc
cagtgctccgggcccgccagccttcggggcctcaacgtggcagaggtgcagaagagcgag
ttcagctgctcaggtcagggggaggccacgcgagtacccacctgcaccctctcttccggc
tcctgcccagccatgtgcacctgcagcagtggcattgtggattgccgtggcaaaggcctc
actgccatccctgctaacctgcccgagaccatgacggagatccgcctggagctgaatggt
atcaaatccatcccgccaggagccttctctccctacagaaagctgcgccggatagacctg
agcaacaaccagattgctgagatcgcgcccgatgccttccagggcctccgctccttgaat
tccctggtcctctatggcaacaagatcacagacctgccccgcggtgtgtttggaggcctg
tacaccctccagctgctgcttttgaatgccaacaagatcaactgcatccggcccgacgcc
ttccaagacctgcagaacctctctctgctctccctgtacgacaacaagatccagagtctt
gccaaggggaccttcacctccctgcgggccatccagacactgcatctggcccagaaccct
tttatctgtgactgtaacctcaagtggctggccgacttcttacgtaccaaccccattgag
acaagcggggcccgctgtgccagcccccggcgcctcgccaacaagcgcattgggcagatc
aaaagcaagaagttccgctgctcagccaaagagcagtacttcatcccagggacggaggat
taccacctgaacagcgagtgcaccagcgatgtggcctgtccccacaagtgccgctgtgag
gccagtgtggtggaatgctccagtctgaagctctccaagatccctgagcgcatcccccag
tccacggctgagctacgactgaacaacaatgagatttctatcctagaggccactgggctg
tttaagaaactctcgcatctgaagaaaattaacctgagcaacaacaaggtgtcagaaatc
gaagacgggacgttcgagggtgcgtcctccgtcagcgagctgcacttgaccgccaaccag
ctggagtccatcaggagcggcatgttccgtggtctagatggcttgcggaccctgatgctg
aggaacaaccacatcagctgcatccacaacgacagcttcacggggctgcgcaatgtgcgg
ctgctgtccctttacgacaaccacatcaccaccatctcccccggcgccttcgacaccctt
caggctctgtccacactaaacctcctggccaaccccttcaattgcaactgccagctagcc
tggctgggtgactggctccggaagaggaagatcgtgacagggaacccgcgctgccagaac
cccgacttcctgcggcagattcccctgcaggatgtggccttccccgacttcaggtgtgag
gaaggccaggaggaggtgggatgcctgccccgcccccagtgcccccaggagtgcgcctgc
ctggacaccgtggtccggtgcagcaacaagcatctccaggctctgcccaagggcatcccc
aagaacgtcacagaactctatttggatgggaaccagttcacgttggttccgggacagctg
tctaccttcaagtatctgcagcttgtggacctgagcaacaacaagatcagctccttaagc
aattcatccttcaccaacatgagccagctgaccacgctgatcctcagctacaatgccctt
cagtgcatccctcctctagccttccaggggctccgctccctgcgcctgctgtctttgcat
ggcaatgatgtctccaccctccaagagggcatctttgcagacgtgacgtctctgtctcac
ttggccattggtgccaaccccttgtactgtgactgccatctccgatggctctccagctgg
gtgaagactggctacaaggaacccggcattgcccgctgtgctggacccccagacatggag
ggcaaacttctgcttaccactcctgccaagaagtttgaatgccaaggtccccccagtctg
gcagtccaggccaagtgtgagccctgcttgtccagcccatgccggaatcagggcacctgc
cacagtgacgccctggaagtatacaggtgtacctgtcccagtggctacaagggccgagac
tgtgaggtgtccctggacagctgttccagcaacccatgtggaaacgggggaacctgccac
acccacgagggcgaggatgctggcttctcgtgttcctgtcccgccggctttgaagggcca
acctgtggagtgaacacagacgactgtgtgaagcacgcctgtgtcaacgggggtgtctgt
gtggacggtgtgggcaattacacctgccagtgccccctgcagtacacaggaagggcctgt
gagcagctggtggacttctgctccccggatctgaacccatgtcagcatgaggcccagtgt
gtgggcaccctggatgggcccaggtgtgagtgtgtgccaggttacacaggtaccaactgc
agcgaaaatcaggatgactgtgaaggtcaccgctgtcagaacggggcccagtgtgtggat
gaagtcaacagttacgcctgccgctgtgccgagggctacagcggacagctctgtgagatt
ccacctgcccccaggagcccctgtgaggggactgagtgccagaatggagccaactgtgta
gaccagggcagccggcctgtatgccagtgcctgccaggcttcggcggccctgaatgtgag
aaattgctcagtgtcaactttgtggaccgtgacacttacctgcagttcactgacctacag
aactggcctcgggccaacatcactcttcaggtatccacagcagaggacaatgggatcctc
ctgtacaatggggataatgaccacatcgcagttgagctgtaccagggccatgtccgtgtt
agctatgacccaggcagctaccccagctctgctatctacagtgccgagaccatcaacgac
gggcagttccacactgttgaactggtcacctttgaccagatggtgaacctctccatcgat
ggcggcagccccatgaccatggacaactttggcaaacactacacgctcaacagcgaggct
cccctctatgtgggagggatgcccgtggacgtgaactcagctgccttccgcctgtggcag
atcctcaatggcaccagcttccacggttgcatccggaatctgtacatcaacaatgaactg
caggacttcactaagacacagatgaagcccggtgtggtgccgggctgtgagccctgccga
aagctctactgtctacacggcatctgccagcccaatgccaccccagggcccgtgtgccac
tgtgaggctggctgggggggcctgcactgtgaccagccagtggatggcccctgccatggc
cacaaatgtgtccatgggaaatgcgtgccccttgatgctcttgcctacagctgccagtgc
caggatgggtactcgggggctctgtgcaaccaggtcggggctgtggcagagccctgtggg
ggcttgcagtgccagcatggccactgccaggcctcagccaccaaaggggcacactgtgtg
tgcaacccaggcttttcaggcgagctgtgtgagcaagagtccgagtgccggggggaccct
gtccgggactttcaccgggtccagaggggctatgccatctgccagaccacgcgcccgctg
tcgtgggtggagtgccggggcgcgtgcccgggccaaggctgctgccggggcctgcggctg
aagcggaggaagctcacgttccagtgcagcgacgggacttcatttgctgaggaggtggag
aagcccacgaagtgcggctgtgcccagtgtgcataa
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