Peromyscus leucopus (white-footed mouse): 114707998
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Entry
114707998 CDS
T07241
Symbol
Trpc6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04022
cGMP-PKG signaling pathway
pleu04360
Axon guidance
pleu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
114707998 (Trpc6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
114707998 (Trpc6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
114707998 (Trpc6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pleu04040
]
114707998 (Trpc6)
Ion channels [BR:
pleu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114707998 (Trpc6)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
114707998
NCBI-ProteinID:
XP_028746785
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Position
7:complement(61061703..61167118)
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AA seq
929 aa
AA seq
DB search
MSQSPGFVARRGGSPLAAPGAGARRNESQDYLLMDELGDDGCSQLPLPPYGYYPSFRGNE
NRLTHRRQTVLREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEEC
LSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAIL
NHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRK
GARIERPHDYFCKCTECSQKQKNDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELS
NELAVLANIEKEFKNDYRKLSMQCKDFVVGLLDLCRNTEEVEAILNGDAETRQPGDLGRP
NLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFLA
LIYWCAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDNAR
QLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAASF
IARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYAI
AVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIG
AKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLN
MLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLLKFK
KWMSDLVQGHKKGFQEDAEMNKRNEEKKFGILGSHEDLSKFSLDKNQLAHKQSSIRSSED
FHLNSFSSPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEK
SQNTEDLAELIRKLGERLSLEAKQEESHR
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagccccgggttcgtggcccggaggggcggctctccgctggctgcccctgga
gccggagcgcggcgcaacgagagccaagactatctgctgatggacgagctgggagacgac
ggctgctcgcagctcccgctgccaccctatggctactatcccagcttccggggtaatgag
aacagactgactcaccggcggcagacagttctccgtgagaagggaagaagactggctaac
cgaggaccagcatacatgtttaatgatcactcaacaagcctgtctattgaggaggaacgc
tttctagatgcagctgaatatggcaacatcccggtggtgcggaaaatgctagaggagtgt
ctctccctcaatgttaactgtgtggattacatgggccagaatgccctgcaattggcagta
gccaatgagcacctggaaattacagagctgttgctcaagaaggaaaacttgtctcgagtt
ggggatgctttgcttttagctatcagtaaaggttatgtacggattgtggaagcaatcctc
aaccatccagcttttgctgaaggtaagaggttagccacaagccccagccagtctgaactc
cagcaagatgacttttatgcctatgatgaagatgggactaggttctcccatgatgtaaca
ccaatcattctggctgctcattgccaggaatatgaaatagtgcacacactcctgagaaag
ggtgcccggattgaacggcctcatgattacttctgcaagtgtacagaatgcagccagaaa
caaaagaatgactcattcagtcactccagatccaggattaatgcctacaaaggcctggca
agtccagcatacctgtctttgtccagtgaagatccagtcatgacagctttagaactcagc
aatgagctggctgtgcttgccaacattgagaaagaattcaagaatgactacaggaagctg
tccatgcagtgcaaagatttcgtggttggtcttctggatctctgcagaaacacggaagaa
gtcgaggccatcctgaacggggacgcagagactcgtcagcccggggacctcggccgtccg
aatctcagccgattaaaacttgccattaaatatgaagtaaaaaaattcgtagctcatcca
aactgccagcaacagctcctgtccatatggtatgagaacctctctggtctacggcagcag
accatggcagtcaagtttctcgtggtccttgcggttgccattggactgcccttcctggct
ctcatatactggtgtgctccatgcagcaagatggggaagataatgcgtggaccattcatg
aagtttgtagcacatgcagcttccttcaccattttcctggggctgcttgtcatgaatgca
gctgacagatttgaaggcaccaagctcctccctaatgaaaccagcacagataatgcaaga
cagctgttcaggatgaaaacatcctgcttctcatggatggagatgctcattatatcctgg
gtaataggcatgatatgggctgaatgtaaagaaatttggactcaaggccccaaagagtac
ttatttgagttatggaatatgcttgattttgggatgttggcaatctttgcagcatcattc
attgcgagattcatggcattctggcatgcatccaaagctcagagcatcattgatgcaaat
gacactttgaaggacttgacaaaagtcacactgggagacaacgtcaagtactacaatctg
gccaggataaagtgggacccttctgatcctcaaatcatctctgaaggtctttatgcaatt
gctgtggtcttaagtttctccagaatagcttacattttaccagcaaacgaaagcttcgga
ccactgcagatttcacttggaagaacagtaaaagatatcttcaaattcatggtcatattc
atcatggtgtttgttgcctttatgattggaatgttcaacctctactcctactacattggc
gcaaaacagaatgaagccttcacaacagttgaggaaagtttcaagacactgttctgggct
atctttgggctttcagaagtgaagtcagtggtcatcaactacaatcacaagttcattgaa
aacattggctatgttctgtatggtgtctataatgtcacaatggttattgttttgctaaat
atgttaattgcgatgatcaacagttcattccaggaaattgaggatgatgctgacgtagag
tggaagtttgcaagggccaaattatggttttcctattttgaggagggaagaacacttcca
gtccccttcaatcttgtgccaagtccaaagtccctgctctatctcctattgaaatttaag
aaatggatgtctgacctggtccagggtcataagaaaggcttccaagaagatgcagagatg
aacaagagaaatgaagaaaagaaatttggaattttgggaagtcatgaagacctttcaaaa
ttttcacttgacaaaaatcagctggcacacaaacagtcaagcataaggagctcagaagac
ttccatttaaacagcttcagtagccctccaaggcagtaccagaaaatcatgaaaagactc
attaaaagatatgtattgcaggctcaaattgataaggagagtgatgaagtgaatgaaggg
gaactgaaggagatcaagcaggacatctcaagccttcgttatgaactcctagaagaaaaa
tctcagaacacagaagacctagcagaacttattcgaaaactgggggagagattgtcctta
gaggccaaacaggaggaaagtcacagataa
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