Panthera leo (lion): 122204177
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Entry
122204177 CDS
T10741
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
plez Panthera leo (lion)
Pathway
plez03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122204177 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plez03000
]
122204177 (KDM2B)
04121 Ubiquitin system [BR:
plez04121
]
122204177 (KDM2B)
03036 Chromosome and associated proteins [BR:
plez03036
]
122204177 (KDM2B)
Enzymes [BR:
plez01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
122204177 (KDM2B)
Transcription factors [BR:
plez03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122204177 (KDM2B)
Ubiquitin system [BR:
plez04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122204177 (KDM2B)
Chromosome and associated proteins [BR:
plez03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
122204177 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122204177 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
LRR_FBXL15
Cupin_8
JmjC
LRR_SKP2
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
122204177
NCBI-ProteinID:
XP_042767395
LinkDB
All DBs
Position
D3:7689055..7843053
Genome browser
AA seq
1345 aa
AA seq
DB search
MNEMQRLPVNSGLKRLWSGCYFLYLRVWVRIFESGSLKVMQSVQRPIDRQRYDENEDLSD
VEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKDFNYEYVQREALRVPLIFREKDGLGIKM
PDPDFTVRDVKLLVGGRRLVDVMDVNTQKGAEMSMSQFVRYYETPEAQRDKLYNVISLEF
SHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCF
TDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQRI
ELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPF
YYEMCWYVLERYVYCVTQRSYLTQEYQRESMLIDAPRKPSIDGFSSDSWLEMEEESCEQQ
PQEEEKEEEEEEEEEEGADKVPKLPADGPASPTSTPSEDQEAPGKKPKAPAMRFLQRTLS
NESEESVKSTTVPTDYPKTPTGSPATGVSAKWTHLTEFELKGLKALVEKLESLPENKKCV
PEGIEDPQALLEGVKNVLKEHADDDPSLAVTGVPVVTWPKKTPKNRAVGRPKGKLGPASA
VKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAP
VLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELP
NCWECPKCNHAGKTGKAYKQKRGPGFKYASNLPGSLLKEQKMNRDNKEGQEPAKRRSECE
EAPRRRSDEHPKKVPPDGILRRKSDDVHLRRKRKYEKPQELSGRKRASTLQTSPGSSSHL
SPRPPLGSSLNPWWRSSLTYFQQQLKPGKEDKLFRKKRRSWKNAEDRMALANKPLRRFKQ
EPEDDLPEAPPTARESDHSRSSSPTAGPSTEGAEGPEEKKKVKMRRKRRLPTKELSKELS
KELNQEIQKTENSLANENHQPIKSEPESESEEPKRPLGLCERPHRFSKGLTGPPRELRHQ
LGPGLRSPPRVISRPPPSVSPPKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMHREVWM
AVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDLNHCKSITPLMLSGIIRRQPVSLDL
SWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQWVEGLKDAQM
RDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHV
TDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGC
EQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatgcaacgtcttccggtcaactcgggtctgaaaaggctctggtctggctgt
tatttcctgtacctgcgtgtgtgggtccgtatctttgagtccgggagtttaaaagttatg
cagtccgtacagcgcccgattgaccgccagagatacgacgagaacgaggacttgtcggac
gtggaggagatcgtcagcgtccgcggcttcagcctggaggagaagctgcgcagtcagctg
taccagggggacttcgtgcacgccatggagggcaaagatttcaactatgagtacgtgcag
agagaagctctcagggttcccctgatatttcgagaaaaggatggactggggattaagatg
cctgaccctgatttcacagtccgagatgtcaaactcctagtgggcggccgtcggctggtg
gacgtgatggatgtgaacacgcagaagggcgcggaaatgagcatgtcccagtttgtgcgg
tactacgagactcctgaggctcagcgggacaagctgtacaatgtcatcagccttgagttc
agccacaccaagctggagcacctggtcaagcgtccgaccgtggtagacctggtggactgg
gtggacaacatgtggccccagcatctgaaggagaagcagacagaagccacgaacgccatt
gcagagatgaaatacccgaaagtgaagaaatactgtctgatgagcgtcaaaggttgtttc
actgacttccacatcgactttggaggcacttctgtttggtaccatgttttccggggtggg
aagatcttttggctgattcctccaaccctacacaatttggcactgtacgaggagtgggtg
ctatcaggcaaacagagtgacatcttcctgggagaccgcgtggagcgatgccaaagaatt
gagctgaaacagggctacacgtttttcatcccttccggttggatccacgcagtctacact
cctgtagactctctggtatttggtggaaacatcctgcacagctttaacgtgcccatgcag
ctgcggatctacgagattgaggacagaacacgggtgcagcccaaattccgttaccccttc
tactatgagatgtgctggtatgtcttggagagatacgtgtactgtgtgacccagcggtcc
tacctcactcaggaataccagagagaatccatgcttattgatgccccaagaaaacccagc
atagacggcttctcatctgattcctggctggagatggaggaggagtcctgtgagcagcag
cctcaggaggaggagaaggaggaggaggaggaagaggaggaggaggagggtgcagataag
gtgcccaaacttccggctgatggtcctgcctcgcccaccagcaccccttcagaggaccag
gaggcccccgggaagaagcccaaagcacctgccatgcggttcctccaaaggactttgtct
aacgagtcggaggagagtgtgaagtccacgacggtgcccacagactaccccaagacgccc
actggctctccagccacgggggtctctgccaagtggacccacctcaccgagtttgagctg
aagggcctgaaagcgctggtggagaaactggaatctctcccagagaacaagaagtgtgtc
cccgagggcatcgaggacccccaggcactcctggagggtgtgaagaatgtcctgaaggag
catgcagacgacgaccccagtctggccgtcactggggtccctgtagtcacttggccaaag
aagactccaaagaaccgggcggtaggtcggcccaaggggaagctgggcccggcctccgcc
gtgaagttggccgccaaccggacgacggcgggagctcgccggcgccggacgcgatgccgc
aagtgcgaggcctgcctgcggaccgagtgcggagagtgtcacttctgcaaggacatgaag
aagttcgggggccccgggcggatgaagcagagctgtatcatgcggcagtgcatcgcgcca
gtgctgccccacaccgccgtgtgcctggtgtgtggcgaggcagggaaagaagacacagtg
gaagaggaagaaggaaagtttaacctcatgctaatggagtgctctatctgcaacgaaatc
atccaccctggatgccttaagattaaggagtcagagggcgtggtcaacgatgagcttcca
aactgctgggagtgtccaaagtgtaaccacgccggcaagaccgggaaagcctacaagcaa
aagcgtggccctggctttaagtatgcctccaacctgcccggctccctgctcaaggagcag
aagatgaaccgggacaacaaggaagggcaggagcctgccaagcggaggagtgagtgcgag
gaggcgcctcggcgcaggtcagatgagcaccccaagaaggtgcccccggatggcatcctg
cgccgaaagtcagacgacgtacacctgaggaggaagcggaaatacgagaagccccaagag
ctgagtggacgcaagcgagcctcgacgcttcaaacgtcccccggttcctcctctcacctc
tcgccgaggccccctctaggcagcagcctcaacccctggtggagatccagtctcacttac
ttccagcagcagctaaaacctggcaaagaagataagcttttcaggaaaaagcggcggtcc
tggaagaacgccgaggaccggatggcccttgccaacaagcctctccggcgcttcaagcag
gagccagaggatgacctgcccgaggcgccccccaccgcccgggaaagcgaccactcccgt
tcgagctcccctaccgccgggcccagcaccgagggggcagagggccccgaggagaagaag
aaggtgaagatgcgccggaaaaggcggcttcccaccaaggagctgagcaaggagctgagc
aaggagctgaaccaagagatccagaagaccgagaacagcctggccaacgagaaccaccag
cccatcaagtcagagcccgagagcgagagcgaggagcccaagcggcccctgggcctctgc
gagcgcccccaccgtttcagcaaggggctcaccggccccccccgggagttgcggcaccag
ctggggcccggcctgcggagccccccccgtgtcatctcccggccccctccctccgtgtcc
ccgcccaagtgcatccagatggagcgacatgtgatccggccgccccccatcagccccccg
cctgactcactgcccctggacgatggggcggcccacgtcatgcacagggaggtgtggatg
gccgtcttcagctacctcagccaccaagacttgtgtgtctgcatgcgggtctgcaggacc
tggaaccgctggtgctgcgataagcggttatggacccgcatcgatctgaaccactgcaag
tccatcacgcccctgatgctgagtggcatcatccggcggcagcctgtctccctggacctc
agctggaccaatatctccaagaaacagctgagctggctcatcaaccggttgcctgggctc
cgagacttggtgctgtcgggctgctcgtggatcgccgtctcagctctctgtagctccagc
tgtcctttgctccggaccctggatgtccagtgggtggaaggactaaaggatgcccagatg
cgggatctcctgtccccgcccacagataacaggccaggtcagatggacaatcggagcaag
ctccggaacattgtggaactgcgtctagcaggcctggacatcacagatgcctccctgcgg
ctcatcatacgccacatgcccctgctgtccaagctccacctcagttactgtaaccacgtt
actgaccagtccatcaacctgctcaccgctgtgggcaccaccacccgagactccttaacc
gaaatcaacctatcagactgcaataaggtgactgaccagtgcctgtccttcttcaaacgc
tgtggaaatatctgtcatattgacctgaggtactgcaagcaggtcaccaaggagggctgt
gagcagttcatagctgaaatgtctgtgagtgtccagtttgggcaagtggaagaaaaactc
ctacagaaactgagttag
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integrated database retrieval system
