Panthera leo (lion): 122204177
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Entry
122204177 CDS
T10741
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
plez Panthera leo (lion)
Pathway
plez03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122204177 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plez03000
]
122204177 (KDM2B)
04121 Ubiquitin system [BR:
plez04121
]
122204177 (KDM2B)
03036 Chromosome and associated proteins [BR:
plez03036
]
122204177 (KDM2B)
Enzymes [BR:
plez01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
122204177 (KDM2B)
Transcription factors [BR:
plez03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122204177 (KDM2B)
Ubiquitin system [BR:
plez04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122204177 (KDM2B)
Chromosome and associated proteins [BR:
plez03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
122204177 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122204177 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
122204177
NCBI-ProteinID:
XP_042767395
LinkDB
All DBs
Position
D3:7689055..7843053
Genome browser
AA seq
1345 aa
AA seq
DB search
MNEMQRLPVNSGLKRLWSGCYFLYLRVWVRIFESGSLKVMQSVQRPIDRQRYDENEDLSD
VEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKDFNYEYVQREALRVPLIFREKDGLGIKM
PDPDFTVRDVKLLVGGRRLVDVMDVNTQKGAEMSMSQFVRYYETPEAQRDKLYNVISLEF
SHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCF
TDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQRI
ELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPF
YYEMCWYVLERYVYCVTQRSYLTQEYQRESMLIDAPRKPSIDGFSSDSWLEMEEESCEQQ
PQEEEKEEEEEEEEEEGADKVPKLPADGPASPTSTPSEDQEAPGKKPKAPAMRFLQRTLS
NESEESVKSTTVPTDYPKTPTGSPATGVSAKWTHLTEFELKGLKALVEKLESLPENKKCV
PEGIEDPQALLEGVKNVLKEHADDDPSLAVTGVPVVTWPKKTPKNRAVGRPKGKLGPASA
VKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAP
VLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELP
NCWECPKCNHAGKTGKAYKQKRGPGFKYASNLPGSLLKEQKMNRDNKEGQEPAKRRSECE
EAPRRRSDEHPKKVPPDGILRRKSDDVHLRRKRKYEKPQELSGRKRASTLQTSPGSSSHL
SPRPPLGSSLNPWWRSSLTYFQQQLKPGKEDKLFRKKRRSWKNAEDRMALANKPLRRFKQ
EPEDDLPEAPPTARESDHSRSSSPTAGPSTEGAEGPEEKKKVKMRRKRRLPTKELSKELS
KELNQEIQKTENSLANENHQPIKSEPESESEEPKRPLGLCERPHRFSKGLTGPPRELRHQ
LGPGLRSPPRVISRPPPSVSPPKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMHREVWM
AVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDLNHCKSITPLMLSGIIRRQPVSLDL
SWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQWVEGLKDAQM
RDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHV
TDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGC
EQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatgcaacgtcttccggtcaactcgggtctgaaaaggctctggtctggctgt
tatttcctgtacctgcgtgtgtgggtccgtatctttgagtccgggagtttaaaagttatg
cagtccgtacagcgcccgattgaccgccagagatacgacgagaacgaggacttgtcggac
gtggaggagatcgtcagcgtccgcggcttcagcctggaggagaagctgcgcagtcagctg
taccagggggacttcgtgcacgccatggagggcaaagatttcaactatgagtacgtgcag
agagaagctctcagggttcccctgatatttcgagaaaaggatggactggggattaagatg
cctgaccctgatttcacagtccgagatgtcaaactcctagtgggcggccgtcggctggtg
gacgtgatggatgtgaacacgcagaagggcgcggaaatgagcatgtcccagtttgtgcgg
tactacgagactcctgaggctcagcgggacaagctgtacaatgtcatcagccttgagttc
agccacaccaagctggagcacctggtcaagcgtccgaccgtggtagacctggtggactgg
gtggacaacatgtggccccagcatctgaaggagaagcagacagaagccacgaacgccatt
gcagagatgaaatacccgaaagtgaagaaatactgtctgatgagcgtcaaaggttgtttc
actgacttccacatcgactttggaggcacttctgtttggtaccatgttttccggggtggg
aagatcttttggctgattcctccaaccctacacaatttggcactgtacgaggagtgggtg
ctatcaggcaaacagagtgacatcttcctgggagaccgcgtggagcgatgccaaagaatt
gagctgaaacagggctacacgtttttcatcccttccggttggatccacgcagtctacact
cctgtagactctctggtatttggtggaaacatcctgcacagctttaacgtgcccatgcag
ctgcggatctacgagattgaggacagaacacgggtgcagcccaaattccgttaccccttc
tactatgagatgtgctggtatgtcttggagagatacgtgtactgtgtgacccagcggtcc
tacctcactcaggaataccagagagaatccatgcttattgatgccccaagaaaacccagc
atagacggcttctcatctgattcctggctggagatggaggaggagtcctgtgagcagcag
cctcaggaggaggagaaggaggaggaggaggaagaggaggaggaggagggtgcagataag
gtgcccaaacttccggctgatggtcctgcctcgcccaccagcaccccttcagaggaccag
gaggcccccgggaagaagcccaaagcacctgccatgcggttcctccaaaggactttgtct
aacgagtcggaggagagtgtgaagtccacgacggtgcccacagactaccccaagacgccc
actggctctccagccacgggggtctctgccaagtggacccacctcaccgagtttgagctg
aagggcctgaaagcgctggtggagaaactggaatctctcccagagaacaagaagtgtgtc
cccgagggcatcgaggacccccaggcactcctggagggtgtgaagaatgtcctgaaggag
catgcagacgacgaccccagtctggccgtcactggggtccctgtagtcacttggccaaag
aagactccaaagaaccgggcggtaggtcggcccaaggggaagctgggcccggcctccgcc
gtgaagttggccgccaaccggacgacggcgggagctcgccggcgccggacgcgatgccgc
aagtgcgaggcctgcctgcggaccgagtgcggagagtgtcacttctgcaaggacatgaag
aagttcgggggccccgggcggatgaagcagagctgtatcatgcggcagtgcatcgcgcca
gtgctgccccacaccgccgtgtgcctggtgtgtggcgaggcagggaaagaagacacagtg
gaagaggaagaaggaaagtttaacctcatgctaatggagtgctctatctgcaacgaaatc
atccaccctggatgccttaagattaaggagtcagagggcgtggtcaacgatgagcttcca
aactgctgggagtgtccaaagtgtaaccacgccggcaagaccgggaaagcctacaagcaa
aagcgtggccctggctttaagtatgcctccaacctgcccggctccctgctcaaggagcag
aagatgaaccgggacaacaaggaagggcaggagcctgccaagcggaggagtgagtgcgag
gaggcgcctcggcgcaggtcagatgagcaccccaagaaggtgcccccggatggcatcctg
cgccgaaagtcagacgacgtacacctgaggaggaagcggaaatacgagaagccccaagag
ctgagtggacgcaagcgagcctcgacgcttcaaacgtcccccggttcctcctctcacctc
tcgccgaggccccctctaggcagcagcctcaacccctggtggagatccagtctcacttac
ttccagcagcagctaaaacctggcaaagaagataagcttttcaggaaaaagcggcggtcc
tggaagaacgccgaggaccggatggcccttgccaacaagcctctccggcgcttcaagcag
gagccagaggatgacctgcccgaggcgccccccaccgcccgggaaagcgaccactcccgt
tcgagctcccctaccgccgggcccagcaccgagggggcagagggccccgaggagaagaag
aaggtgaagatgcgccggaaaaggcggcttcccaccaaggagctgagcaaggagctgagc
aaggagctgaaccaagagatccagaagaccgagaacagcctggccaacgagaaccaccag
cccatcaagtcagagcccgagagcgagagcgaggagcccaagcggcccctgggcctctgc
gagcgcccccaccgtttcagcaaggggctcaccggccccccccgggagttgcggcaccag
ctggggcccggcctgcggagccccccccgtgtcatctcccggccccctccctccgtgtcc
ccgcccaagtgcatccagatggagcgacatgtgatccggccgccccccatcagccccccg
cctgactcactgcccctggacgatggggcggcccacgtcatgcacagggaggtgtggatg
gccgtcttcagctacctcagccaccaagacttgtgtgtctgcatgcgggtctgcaggacc
tggaaccgctggtgctgcgataagcggttatggacccgcatcgatctgaaccactgcaag
tccatcacgcccctgatgctgagtggcatcatccggcggcagcctgtctccctggacctc
agctggaccaatatctccaagaaacagctgagctggctcatcaaccggttgcctgggctc
cgagacttggtgctgtcgggctgctcgtggatcgccgtctcagctctctgtagctccagc
tgtcctttgctccggaccctggatgtccagtgggtggaaggactaaaggatgcccagatg
cgggatctcctgtccccgcccacagataacaggccaggtcagatggacaatcggagcaag
ctccggaacattgtggaactgcgtctagcaggcctggacatcacagatgcctccctgcgg
ctcatcatacgccacatgcccctgctgtccaagctccacctcagttactgtaaccacgtt
actgaccagtccatcaacctgctcaccgctgtgggcaccaccacccgagactccttaacc
gaaatcaacctatcagactgcaataaggtgactgaccagtgcctgtccttcttcaaacgc
tgtggaaatatctgtcatattgacctgaggtactgcaagcaggtcaccaaggagggctgt
gagcagttcatagctgaaatgtctgtgagtgtccagtttgggcaagtggaagaaaaactc
ctacagaaactgagttag
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