Panthera leo (lion): 122214946
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Entry
122214946 CDS
T10741
Symbol
LIG4
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
plez Panthera leo (lion)
Pathway
plez03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
122214946 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plez03400
]
122214946 (LIG4)
Enzymes [BR:
plez01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
122214946 (LIG4)
DNA repair and recombination proteins [BR:
plez03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
122214946 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
122214946
NCBI-ProteinID:
XP_042786091
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All DBs
Position
A1:complement(77848349..77858173)
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AA seq
911 aa
AA seq
DB search
MATPQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRRFHDALHKNQKDV
RDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSARRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSAFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGFNYTD
QFGDSPREGSLTPFIHSAFKTDVQNCILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGRETLKKRYDILTSVFTPIPGRIDIVQKTQAHTKKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDTLIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSMFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSSILC
GTEKPEVYIEPCHSVIVQIKATEIVPSEMYKTGCTLXFPRIEKIREDKEWYECTTLDDLE
QLRGKASGKLASKHLYVGGDDEPQEKRRKAAPRIKKVVGIIEHLKAPNLSNVNKVSNVFE
DVEFCVMSGTNSHPKPDLENRLAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNEHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSGEQSPGEIASMIANLEYRYSWDHSPLSMFRHHIIYLDLYAVVNDLSTKIEGTRLAF
TALELRFHGAQVVSCLAQGVSHVIIGEDHSRVADLKAFRRTLKRKFKILQQDWVTDSIDK
CELQEENQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctaccccacagacttcacaaactgttgcgtctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaaggacgggcagaaaaaatcagacacttcagg
gaatttttagattcttggagaagatttcatgatgcccttcataagaaccaaaaagatgtc
agggactctttttatccagcaatgagacttattctccctcagctcgaaagagaaagaatg
gcctatggaatcaaagaaaccatgcttgctaaactttatattgagttgcttaatttacct
agagaaggaaaagatgcccttaagcttttaaattacaggacacccactggaactcgtgga
gatgctggagactttgcgatgattgcgtatttcgtgttgaaaccaagatgtttgcagaaa
ggaagtttaacaatacagcaagtaaatgaccttttagactcaattgccagcaataattct
gccagaagaaaggacctaataaaaaagagtcttcttcagcttataagtcagagttcggca
ctggaacaaaagtggcttatacggatgatagtaaaggacttgaaacttggctttagtgag
caatctgtattttctgcattccacaatgatgctgccgagttgcataatgtcaccacggat
cttgaaaaagtctgtaggcaactgcacgatccttccgtcggacttagtgatatttctatc
actttattctctgcctttaaaccaatgctggctgccatagcagatattgagagaattgag
aaggacatgaaacaccagagtttctacattgagaccaagctagacggtgagcgtatgcaa
atgcacaaggatggggatgtgtatcagtacttctcccggaacgggtttaactatacagat
cagtttggagattctccacgggaaggctctcttacaccattcattcacagtgcattcaaa
acagatgtgcaaaactgtatcctggatggtgagatgatggccttcaaccctaatacacaa
acttttatgcaaaaggggaataagttcgatatcaagagaatggtggaagattccgatctg
caaacttgttactgtgtttttgacgtactgatggttaataataaaaagctagggcgtgag
accctgaaaaagaggtatgacattctcactagtgtttttacaccaataccaggtaggata
gacatagtgcaaaaaacacaagctcatacgaagaaagaagtaattgatgctttgaatgaa
gcaatagacaaaagagaagagggaatcatgatcaaacatcctctatccatttacaagcca
gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtcgatgggttgatggat
gaactggacaccttaattgtggggggctattggggtaaaggttcgcgaggcggaatgatg
tctcattttctgtgtgctgtagcagagaaacctcctcctggtgaaaaaccctccatgttt
cacactctctgtcgtgttggttcaggctataccatgaaagaactgtatgatctgggtttg
aaattggccaagcattggaagccttttcataaaaaagctccaccaagtagcatcttatgt
ggaacagagaagccagaagtgtacattgagccttgtcattctgtcatcgttcagattaaa
gcaacagagatcgtccccagtgagatgtataaaactggctgcaccttgncgtttccccga
attgaaaagatcagagaagacaaagagtggtatgaatgtaccaccctagatgacttagaa
caacttcgagggaaagcatctggaaagcttgcatccaaacacctttatgttggtggtgat
gatgaaccacaagagaagaggcggaaagctgccccaaggatcaagaaagttgttggaatc
attgagcacctaaaagcacctaacctttctaatgtaaacaaagtttctaacgtatttgaa
gatgtggagttttgtgttatgagtggaacaaacagccatccaaagcccgatctggagaac
agacttgcggaatttgggggttatatagtacaaaatccaggcccagacacctactgtgtg
attgcagggtccgagaacatcagggtgaaaaacataatttcttccaatgaacatgatgtt
gtcaagcctgagtggctgttagagtgttttaagaccaaaagctgtgttccatggcaacct
cgctttatgattcatatgtgcccatcgacgaagcagcattttgcccgtgaatatgattgt
tatggtgatagttatttcgttgatacagatttgaaccaactgaaagaagtgttctcagga
attaaaaattccggcgaacaaagtcctggagaaatagcttccatgattgctaatttagaa
tatcgatattcctgggaccactccccactcagtatgtttcgacaccacattatttatttg
gacttgtatgctgttgttaatgacctgagtaccaaaatcgaggggacgaggttagctttt
acagctttggaacttcgatttcatggagcacaagtagtttcttgtttagctcagggagtg
tctcatgtaatcattggggaggatcatagtcgtgttgcagatttgaaagcttttcgaaga
actcttaagagaaaatttaaaatcctgcaacaagattgggtaactgattcaatagacaag
tgtgaattgcaggaggaaaatcagtatttggtttaa
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