Pantoea ananatis LMG 5342: PANA5342_2961
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Entry
PANA5342_2961 CDS
T01728
Symbol
rumB
Name
(GenBank) 23S rRNA uracil-5-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plf03009
]
PANA5342_2961 (rumB)
Enzymes [BR:
plf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
PANA5342_2961 (rumB)
Ribosome biogenesis [BR:
plf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PANA5342_2961 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
CCF10354
LinkDB
All DBs
Position
complement(3099569..3100711)
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AA seq
380 aa
AA seq
DB search
MHCALYDAHRCRSCQWLEKPYPQQLDDKGARLNQLLAAFPVKQWLPPVTSAQQGFRNKAK
MVVSGSVERPVFGMVQRNGEATDLCACPLYPDSFSPVLATLKPFIARAGLTPYNIERQRG
ELKYLLLTESTQGGMMLRFVLRSHTKLTQLRNALPWLQQQLPQLKVISANIQPVHMAILE
GDEEVALTSTQALADEFNGVPLWIRPQSFFQTNPQVASALYATARDWVRQLPVTSMWDLF
CGVGGFGLHCASPTLALTGIEISPEAIQCAQRSAQMLGLNNVSFAALDSTAFATERDRVP
QLVLVNPPRRGIGEALCDYLSAMAPDYVLYSSCNPQTMAQDIARLKDYEVTQVQLFDMFP
HTAHFEVLTLLTRQRSGGPA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcgcgctctatgacgctcaccgttgccgctcttgccagtggcttgaaaaaccc
tatccccagcagcttgatgataaaggggcccggctgaaccaactgctggccgcgtttccg
gttaaacagtggctgccgccggtaacctcagcgcagcaagggttccgcaataaagcaaag
atggtggtaagcggcagcgttgagcgtccggttttcggcatggtgcagcgcaacggcgag
gcgacagatctttgcgcatgtccgctctatcccgacagcttttccccggtactggcgacc
ttaaaaccctttatcgcgcgtgccggtttaacgccgtataacattgaacgtcagcgcggt
gaactgaagtatttgctgctcaccgaaagtacccagggcggcatgatgctgcgttttgtc
ctgcggtcgcacaccaaactgacacagctgcgtaacgccctgccgtggctacagcagcaa
ctcccacagctaaaggtcatttcagccaacatacagccggtgcatatggctattctggaa
ggggacgaggaggtcgcattgacatccactcaggcgctggcggacgagtttaacggcgtg
ccgttgtggattcgaccacaaagctttttccagaccaatcctcaggtcgccagtgcgctg
tacgcgacggcgcgcgactgggtacgtcaactgccggtgaccagcatgtgggatctgttt
tgcggcgtgggcggatttggcctgcattgtgcctcacccacgttagcgcttaccggtatt
gagatcagtcccgaagccatccagtgcgcgcagcgctctgcgcagatgctgggtctgaac
aacgtcagttttgccgcactggattccaccgcgtttgccaccgagcgggatagggtgcca
cagctggtgctggtgaatccgccgcgtcgcgggattggggaagcgctgtgtgattatctg
agcgccatggcgcctgactatgtgctctattcaagctgcaatccgcagaccatggcacag
gatattgcccggctgaaggattacgaggtgacccaggtacagctgttcgatatgtttccg
cacacggcgcattttgaagtgctgacgctactgacgcgtcaacggtcaggcgggccagcc
tga
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