Paucimonas lemoignei: NCTC10937_01798
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Entry
NCTC10937_01798 CDS
T05492
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
plg
Paucimonas lemoignei
Pathway
plg00220
Arginine biosynthesis
plg00250
Alanine, aspartate and glutamate metabolism
plg00430
Taurine and hypotaurine metabolism
plg00910
Nitrogen metabolism
plg01100
Metabolic pathways
plg01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
NCTC10937_01798 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NCTC10937_01798 (gdhB)
00220 Arginine biosynthesis
NCTC10937_01798 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
NCTC10937_01798 (gdhB)
Enzymes [BR:
plg01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
NCTC10937_01798 (gdhB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
Motif
Other DBs
NCBI-ProteinID:
SQF97679
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All DBs
Position
1:2001470..2006326
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AA seq
1618 aa
AA seq
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MAFFTAASKPDFQHQLQSALAQHISEQALPQVALFAEQFFGIISLDELTQRRLSDLAGCT
LSAWRLLERFEHGTPQVRVYNPDYERHGWQSTHTAVEVLHHDLPFLVDSVRTELNRRGYS
IHTLQTTVLSVRRGSKGELLELLPKGANGEGILQESLMYLEIDRCANASELNVLARELEQ
VLGEVRVAVEDFEPMKARLNELLAGIDSVQYGVDEDEKSEIKAFLQWLVNNHFTFLGYEE
FEVRSEGDGGQLVYDESSFLGLTKRLRAGLSKEDLHIEGYAVNYLQEPTLLSFAKAAQPS
RVHRPAYPDFVSIRQIDASGKVIKECRFMGLYTSSVYGESVREIPYIRRKVAEIERRSGF
HPKAHLGKELAQVVEVLPRDDLFQTPVDELFNTVMSIVQIQERNKIRVFLRKDPYGRFCY
CLAYVPRDIYSTEVRQKIQQVLMERLKASDCEFWTFFSESVLARVQLILRVDPKVNLNID
PVQLENEVIQACRSWKDDYSSLVVESFGEAHGTNVLADFPKGFPAGYRERFAAHSAVVDM
QHLLSLTEANPLVMSFYQPLSGDKAQLHCKLYHADTPLALSDVLPILENLGLRVLGEFPY
RLRHTNGREFWIHDFAFTAAEGMEIDIQQLNDTLQDAFVHIVRGDAENDAFNRLVLTAGL
PWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLATDDL
DDKQLRLEQAILTALDDVQVLNEDRILRRYLDLIKATQRTNFYQPDANGQSKSYFSFKFN
PRLIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQHV
KNSVIVPVGAKGGFLPRRLPLGGSRDEIQAEGIACYRIFISGLLDITDNLKEGGLVPPAN
VVRHDDDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITAKG
AWVGVQRHFRERGINVQQDSISVIGIGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFIDPN
PEPASSFVERQRLYDLPRSSWMDYDTSLMSAGGGIFPRSAKSIAITPQMKERFDIKADKL
TPTELLNALLKAPVDLLWNGGIGTYVKSSEESHADVGDKANDALRVNGNELRCKVVGEGG
NLGMTQLGRVEFGLNGGGSNTDFIDNAAGVDCSDHEVNIKILLNEVVQAGDMTEKQRNQL
LESMTDEVGNLVLGNNYKQTQALSMAARRAYERIAEYKRLMADLEARGKLDRAIEFLPAE
EQINERVAAGQGLTRPELSVLISYSKIDLNEALLESRVPDDDYLARDMETAFPPSLGAKF
SDAMRQHRLKREIVSTQISNDLVNHMGITFVQRLKESTGMSAANVAGAYVIVRDIFHLPH
WFRQIEALDYKVPADIQLALMDELMRLGRRATRWFLRSRRNELDAGRDVAHFGPHIAALG
LKLDELLEGPTREVWQTRYQAYVQAGVPELLARMVAGTSHLYTLLPIIEASDVTGQNAAD
VAKAYFAVGSALDVTWYLQQISSLPVENNWQALAREAFRDDIDWQQRAITISVLQMADGP
EDIEERLNLWLEQHSAMVERWRAMLVDIRAASGTDYAMYAVANRELLDLAMSGQVLAV
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcaccgcagccagcaagcccgatttccagcatcaactgcaatcggcactg
gcgcagcacatcagcgaacaggcactgccacaagtggcgctgtttgctgagcaattcttc
ggcattatttcccttgatgaactgacccagcgtcggttgtctgatctggctggctgcacc
ttgtcggcctggcgtctgcttgaacgtttcgagcacggcaccccgcaggtccgtgtctac
aaccccgattacgaacgtcatggctggcaatcgacacacactgccgtcgaagtgctgcat
cacgatctgccgtttctggtggattcggtacggactgaactgaaccgtcgcggttacagc
attcataccctgcaaaccaccgtgctgagtgtgcgtcgtggcagcaagggtgagttgctg
gagctgctgcccaagggcgcaaacggcgaaggcatcctgcaagaatcgctgatgtacctg
gaaatcgaccgctgcgccaacgccagtgagctgaacgtgctggcccgcgagctggagcaa
gtgctcggcgaagtgcgggtggcggtggaagatttcgaaccgatgaaagcccgcctcaac
gagttgctggcaggcatcgattcggtgcagtacggcgtggatgaggacgagaagtccgaa
atcaaggcgtttctgcagtggctggtgaataaccatttcacctttctgggctacgaagag
ttcgaagtgcgcagcgagggcgacggtggccagctggtgtatgacgaatcctcattcctg
ggtttgaccaagcgtttacgtgcaggcctgagcaaagaagacctgcacatcgaaggctat
gcggtgaattacctgcaagagccgacgctgctgtccttcgccaaggcggcgcagccaagc
cgcgtgcaccgtccggcctatccggattttgtctcgatccgtcagatcgacgcgtccggc
aaggtcatcaaagaatgccgcttcatgggcctgtacacctcgtcggtctatggcgaaagc
gtgcgggaaatcccgtacatccgtcgcaaggttgcggaaatcgagcgtcgctcgggcttc
catcccaaggcgcacctgggcaaagagttggcgcaggtggtggaagtgctgccccgcgat
gacctgttccagaccccggtggacgagctgttcaacaccgtgatgtccatcgtgcagatc
caggaacgcaacaagatccgcgtgttcctgcgcaaagacccctacggtcgtttctgctac
tgcctggcctatgtgccgcgcgatatctattcaacggaagtgcggcagaaaatccagcaa
gtgctgatggagcgtctcaaggccagcgactgtgaattctggaccttcttctccgaatcc
gtgctggcccgtgtgcagttgatcctgcgggtggacccgaaggtcaatctgaacatcgac
ccggtgcagctggaaaacgaagtcatccaggcgtgccgttcgtggaaggatgattattcg
agcctggtggtcgaaagcttcggcgaagcccatggcaccaacgtgctggcggacttccct
aaaggcttcccggccggttatcgcgagcgtttcgcagcgcattcggctgtggtcgacatg
caacacctgttgagcctgaccgaagccaatccgttggtgatgagcttttatcagccgctg
tccggcgacaaggcgcagctgcactgcaagctgtaccacgccgataccccgctggccctg
tccgacgtgttgccgattctggaaaacctcggcctgcgcgtgctgggtgagttcccgtat
cgcctgcgccataccaatggccgcgagttctggattcacgatttcgcgttcactgctgcc
gaaggtatggaaatcgatatccagcagctcaacgacaccttgcaggacgccttcgtccac
atcgtgcgcggcgatgctgaaaacgatgcgttcaaccgtctggtgctgaccgctggtttg
ccatggcgcgacgtggcgttgctgcgtgcgtatgcccgttacctgaaacagattcgactg
ggctttgacctgggctatatcgccagcaccctgaacaaccacacagacatcgctcgcgag
ctgacccggctgttcaagacccgtttctacctggcccgcaagctggccactgacgacctg
gacgacaagcaactgcgtctggaacaggcgattctgaccgccctggacgatgttcaggtg
ctcaacgaagaccgcatcctgcgtcgttatctggacctgatcaaagccacccagcgcacc
aacttctaccagccggacgccaacggtcagagcaagagctacttcagcttcaagttcaac
ccgcgcctgatccccgagctgcccaagccagtgccgaagttcgaaatcttcgtttattcc
ccgcgtgtcgaaggcgtgcacctgcgctttggcaatgtggcccggggtgggctgcgctgg
tccgatcgtgaagaagacttccgcactgaagtgctcggcctggtaaaagcccagcacgtg
aagaactcggtcatcgtgccagtgggcgccaaaggtggtttcctgccgcgtcgtctgccc
ctgggcggtagccgtgatgagatccaggccgaaggcatcgcctgctatcgcatcttcatc
tcgggtttgctggacatcaccgacaacctgaaagagggcggcctggtgccaccggccaac
gtcgtgcgtcatgacgacgatgacccgtacctggtggtggcggcggacaaaggcactgcg
accttctccgacatcgccaatggtatcgccatcgattacggcttctggctgggcgatgct
ttcgcctccggtggctcggccggttatgaccacaagaaaatgggcattaccgccaaaggc
gcgtgggtcggcgtgcagcgtcacttccgcgagcgcggcatcaacgtccagcaggacagc
atcagcgtgatcggcatcggcgacatggccggtgacgtgttcggcaacggcttgttgatg
tctgacaaactgcagctggtcgcggccttcaaccatttgcacatcttcatcgatccgaac
ccggaaccggccagcagcttcgtcgagcgccagcgtttgtacgacctgccgcgttcgtcg
tggatggattacgacaccagcctcatgtcggccggtggcggcatcttcccgcgcagcgcg
aaaagcatcgccatcacgccgcaaatgaaagaacgcttcgacatcaaggccgacaagctg
accccgaccgaactgctcaacgcgctgctcaaggcgccggttgatctgttgtggaacggc
ggtattggcacttacgtcaagtccagcgaagaaagccacgccgatgtaggcgacaaggcc
aacgacgcactgcgggtcaacggtaacgaactgcgctgcaaggtggtgggcgagggcggc
aacctgggcatgacccaattgggtcgcgtcgaattcggcctcaatggcggcggctccaac
accgacttcattgacaacgctgctggcgttgactgctccgaccacgaagtgaacatcaag
atcctgctcaacgaagtggtgcaggccggtgacatgactgaaaagcagcgcaaccagctg
ctggaaagcatgaccgacgaagtcggcaatctggtgctgggcaacaactacaagcagacc
caggcgctgtccatggcggcacgccgtgcctacgagcggatcgctgagtataagcgcctg
atggcggaccttgaagcccggggcaagctggaccgcgctatcgagttcctgccggccgaa
gagcagatcaacgaacgcgtcgcggcgggccagggcctgacccgtccggaactgtcggtg
ttgatttcctatagcaagatcgacctgaacgaagcgttgctggagtcccgtgtaccggat
gatgactatctggcccgcgacatggaaaccgcgttcccgccttcactgggggccaagttc
tccgacgccatgcgtcagcaccgtctgaagcgtgaaatcgtcagcacccagatctccaac
gatctggtcaaccacatgggcatcaccttcgtgcagcggctcaaagagtccaccggcatg
agcgcggccaacgtggcaggcgcttacgtgatcgtgcgggacatcttccacctgccgcac
tggttccgtcagatcgaggcactggactacaaggtcccggccgacatccagctggccctg
atggacgagctgatgcgcttgggccgtcgcgccacgcgctggttcctgcgcagccgtcgc
aacgagctcgatgcggggcgtgacgtcgcgcatttcggtccgcacatcgccgcattgggt
ctgaaactcgacgagttgctcgaaggcccgacccgtgaagtctggcagacgcgctatcag
gcgtacgttcaggcgggtgtgccggagttgctggcacgcatggttgctggcaccagccac
ttgtacaccttgctgccgatcatcgaagcgtccgacgtgacggggcagaacgctgccgac
gtggccaaggcttacttcgccgtgggcagtgcgctggacgtgacctggtacctgcaacag
atcagcagcctgccggtggaaaacaactggcaggccttggcccgtgaagcgttccgtgat
gacatcgactggcagcagcgggcgatcacgatttcggtcctgcaaatggccgatggccct
gaggacatcgaggagcgtctgaatctgtggcttgagcagcacagtgcgatggtcgagcgc
tggcgtgccatgctggtcgacattcgtgcggccagcgggacggattatgcgatgtatgcg
gtggccaaccgtgagttgctggacttggccatgagtgggcaggttttggcggtttga
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