Planctomyces sp. SH-PL62: VT85_05525
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Entry
VT85_05525 CDS
T04401
Symbol
nth_1
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VT85_05525 (nth_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plh03400
]
VT85_05525 (nth_1)
Enzymes [BR:
plh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VT85_05525 (nth_1)
DNA repair and recombination proteins [BR:
plh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VT85_05525 (nth_1)
Prokaryotic type
VT85_05525 (nth_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AMV36869
UniProt:
A0A142YCF6
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All DBs
Position
1413799..1414548
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AA seq
249 aa
AA seq
DB search
MNKRPAAVADDVRVLAMAVHDRLCTAYGCPIPYFHEFDPLSELVSSLLSHRTRNAESGRA
FKQLRSRFGTWESVRDAPTAEVQEAVAPCTWPEQKAPRVQQVLRAITERRGGELSLDFLA
GLPVVEARAWLEELPGVGPKTSAATLLFSRLRMPALPVDSHHHRVAVRLGLIPASVAVGP
SHALLEAQLPADWSAQQVYDNHEALMLHGQRVCHHAHPQCARCVVLDLCPFGQSRTGGAA
RTADDDRAR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaagcgccccgcagccgtggcggacgacgtccgcgtcctggcgatggcggtccac
gaccgactttgcaccgcgtatggttgtccgatcccttatttccacgagttcgacccgctg
agcgaactggtctcgtcgctgctgtcgcaccggacgcgcaacgccgaatcgggccgggcg
ttcaagcagttgcggtcgcggttcgggacgtgggagtcggtgcgagacgcgccgacggcc
gaggtgcaggaagctgtagcaccctgcacctggcccgaacagaaggccccgcgagtccag
caggtcctccgcgcgatcaccgagcgtcgcggcggggagttgtcgctcgacttcctcgcg
ggcctgccggtggtcgaggctcgcgcctggcttgaggaactccccggcgtggggccgaag
accagcgccgcgaccttgcttttcagccgcttgcggatgccggcccttccggtggacagt
catcaccaccgggtcgccgtgcgactgggattgatccccgcatccgtggccgtcggcccg
tcgcacgccctactcgaagcccagttgccggccgattggtcggcgcagcaggtgtacgac
aaccacgaggcgttgatgctccacggccagagggtgtgccaccacgcgcatccccaatgc
gcgcggtgcgtcgtcctcgacctctgcccgttcgggcaatcccggacgggaggggcggct
agaaccgcagatgacgatcgcgcgcggtga
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