Planctomyces sp. SH-PL62: VT85_06875
Help
Entry
VT85_06875 CDS
T04401
Symbol
bepF
Name
(GenBank) Efflux pump periplasmic linker BepF
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh01501
beta-Lactam resistance
plh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VT85_06875 (bepF)
01503 Cationic antimicrobial peptide (CAMP) resistance
VT85_06875 (bepF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plh03036
]
VT85_06875 (bepF)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plh02000
]
VT85_06875 (bepF)
01504 Antimicrobial resistance genes [BR:
plh01504
]
VT85_06875 (bepF)
Chromosome and associated proteins [BR:
plh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VT85_06875 (bepF)
Transporters [BR:
plh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VT85_06875 (bepF)
Antimicrobial resistance genes [BR:
plh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VT85_06875 (bepF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AMV37137
UniProt:
A0A142YD74
LinkDB
All DBs
Position
complement(1780356..1781624)
Genome browser
AA seq
422 aa
AA seq
DB search
MKRILSALLGPFRFVYRRPITSLMLLVLLSAGVVMWAPKLGVAILPPPYAQKVQGYADVL
GAKAARLKVVLVSKYESYFNKPKAEAHHEEHKIVVTSPQSRDVTVVERYVCQIHSRRHID
ICALDGGYLQEVLVKEGQAVKKGDLIFKILPVLYQSRMEAEQAEAQLAQLEYNNTKMLSQ
SKVVSQNEVLLLQAKLAKAKAKMDLAKAELNFTDIRAPFDGIVDRLHEQLGSLIKEGDVL
TTLSDNSTMWVYFNVPEAQYLEYTIGLEEHKEEPKIELMLAGDRKFDQLGKIGAIEAMFN
NETGNISFRADFPNPKRLLRHGQTGTVLLSKISKDAVVIPQRATFEILAKRFVYVVGEDG
KARQREITIKDEMDDIFVVDNGVKVDEKIILEGVRQVHEGEVVEYEFSPPEMVMANLKNR
AE
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcatcttgtccgccctgctgggccccttcaggttcgtctatcggcggcccatc
acctcgttgatgctgctggtcttgctatcagccggcgtggtcatgtgggcgccgaagttg
ggggtcgcaattcttcccccgccttatgcgcagaaggtgcagggctacgcggacgttctc
ggcgcgaaggccgcacggttgaaggtcgttctcgtctccaaatacgagtcgtatttcaat
aagccgaaggcggaggcccaccacgaggagcacaagatcgtggtcaccagcccgcagtcc
agggacgtgaccgtcgtcgagcgatacgtctgccagatccactcgcggcgacatatcgac
atctgcgccctggatggcggctacctccaggaagtgctggtgaaagagggacaggccgtc
aagaagggcgatcttatcttcaagatcctgccggtcctgtaccagtcgaggatggaggcc
gagcaggcggaggcccagctggcgcaactggagtacaacaacacgaagatgttgtcccag
tccaaggtcgtctcgcagaacgaggtgcttctgcttcaggcgaagctggcgaaggccaag
gcgaagatggatctcgcgaaggccgagctgaacttcacggacatccgggcgccgttcgac
ggcatcgtcgaccgtctgcacgagcagctgggcagcctgatcaaggagggcgacgtcctg
acgaccctgtccgacaacagcacgatgtgggtctatttcaacgtgcccgaggcccagtac
ctggagtacacgatcggcctggaggagcataaggaagaaccgaagatcgagctcatgctg
gcgggcgatcggaagttcgaccagctcggcaagatcggcgcgatcgaggcgatgttcaac
aacgaaaccggcaacatctcgttccgagcggattttccgaacccgaagcgtctgttgcgc
cacggccagacgggcacggtgctgctcagcaagatctcgaaggacgcggtcgtcatcccc
cagcgagccacgttcgagatcctcgccaagcgcttcgtgtacgtcgtcggcgaggacggc
aaggcgcgtcagcgcgagatcacgatcaaggatgagatggacgacatcttcgtcgtcgac
aatggcgtgaaggtcgatgagaagatcatcctggagggggtccgacaggtgcacgagggg
gaggtcgtggagtatgaattcagccctccggagatggtgatggcgaacctgaagaacagg
gcggaataa
DBGET
integrated database retrieval system
