Planctomyces sp. SH-PL62: VT85_10215
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Entry
VT85_10215 CDS
T04401
Symbol
nth_2
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VT85_10215 (nth_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plh03400
]
VT85_10215 (nth_2)
Enzymes [BR:
plh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VT85_10215 (nth_2)
DNA repair and recombination proteins [BR:
plh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VT85_10215 (nth_2)
Prokaryotic type
VT85_10215 (nth_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF2400
Motif
Other DBs
NCBI-ProteinID:
AMV37801
UniProt:
A0A142YEY5
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All DBs
Position
2631509..2632198
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AA seq
229 aa
AA seq
DB search
MGEGTEGRGGTEPWDADEAFRRLREAVRGLPKAAVFDLRDRGFGSPFEVLVASLISARTR
DETTLAVGLRLFPIAASPQAMIDLGEARLVELIRPATFPEPKARDILELSRRILAEHGGE
VPETVEELTAFRGVGPKIAALTRAVAFGAATIPVDVHVHRVANRWGLVATRTPEATMKAL
EAVLPRRYWIETNERLVPFGKFICTGVAPFCSTCLLLSMCRRVGVTRSR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagggaccgaagggcggggggggaccgagccctgggacgccgatgaggcgttc
cggcggctgcgcgaggccgtgcgggggctccccaaggcggcggtgttcgacctccgcgac
cgcgggttcggcagcccgttcgaggtcctcgtcgccagcctgatctcggcccggacccgc
gacgagacgacgcttgcggtcggcctccggctgttcccgatcgcggcctcgccccaggcg
atgatcgacctgggggaagcccggctggtcgagctgatccggccggcgaccttccccgag
cccaaggcgcgggacatcctggagctgtcgcggcggatcctcgcggagcacggcggggag
gtcccggagacggtcgaggagctgacggccttccgcggggtcggcccgaagatcgcggcc
ctgacgcgggccgtggcgttcggcgcggcgacgatcccggtcgacgtccacgtccaccgg
gtcgccaaccgctggggcctggtcgccacccgcacgccggaggcgaccatgaaggccctg
gaggccgtccttcccaggcgctactggatcgagaccaacgaacgcctggtgccgttcggc
aagttcatctgcacgggcgtcgcgccgttttgctcgacctgcctcctgctctcgatgtgc
cggcgcgtcggggtgacgcggagccggtga
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