Candidatus Pristimantibacillus lignocellulolyticus: NAG76_19720
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Entry
NAG76_19720 CDS
T09890
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
plig
Candidatus Pristimantibacillus lignocellulolyticus
Pathway
plig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NAG76_19720 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plig03400
]
NAG76_19720 (nth)
Enzymes [BR:
plig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NAG76_19720 (nth)
DNA repair and recombination proteins [BR:
plig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NAG76_19720 (nth)
Prokaryotic type
NAG76_19720 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
URN94027
UniProt:
A0A9J6ZD18
LinkDB
All DBs
Position
complement(4551502..4552185)
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AA seq
227 aa
AA seq
DB search
MNGKQKMRHVLDILADMFPDAHCELIHSNPFELTIAVLLSAQCTDETVNKVTVNLFQKYK
SPADYLAVPLEELEGDIRRIGLFRSKASNIQKLCRIVIDKYNGDVPNTHEGLVELPGVGR
KTANVVMSNAFGVPAIAVDTHVDRVSKRLGFAKQDDNVLEVEHKLMKLVPREEWTLTHHR
LIFFGRYHCKAQNPQCAVCPLIELCKEGKKRMKVTEKTKAKLKTKLT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaagcaaaaaatgaggcatgtattagacatattagctgatatgtttcctgat
gctcattgtgaacttattcacagcaatccatttgaattaacgattgctgtactgctttca
gctcaatgtacagatgaaacagtgaataaggtgacggttaatttattccaaaagtataaa
tctcctgcagattatttggctgtgcctcttgaagaacttgaaggagatatccggagaata
ggtttatttcgtagtaaagcttctaatatacaaaaattgtgccgtatcgtcattgataag
tataatggtgatgtaccaaatactcatgaaggcctagttgaattacctggcgttggacgt
aagacggctaatgtggtaatgtcaaatgcgtttggtgttcctgccattgcagttgatacc
catgtggatcgagtctccaagcgtttaggttttgccaaacaagacgataacgtattagaa
gtagaacataaactgatgaagctggtaccgcgagaggaatggaccctaacacatcaccgt
ttaatcttttttggtcgctatcattgcaaagcgcaaaatccgcaatgtgcagtctgtcct
ttaattgagttgtgcaaagaaggaaagaaacgtatgaaagtcacagaaaaaactaaagct
aagttaaaaactaaactaacgtaa
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