Pseudomonas lijiangensis: KQP88_10040
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Entry
KQP88_10040 CDS
T08713
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
plij
Pseudomonas lijiangensis
Pathway
plij01501
beta-Lactam resistance
plij01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KQP88_10040
01503 Cationic antimicrobial peptide (CAMP) resistance
KQP88_10040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plij03036
]
KQP88_10040
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plij02000
]
KQP88_10040
01504 Antimicrobial resistance genes [BR:
plij01504
]
KQP88_10040
Chromosome and associated proteins [BR:
plij03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KQP88_10040
Transporters [BR:
plij02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KQP88_10040
Antimicrobial resistance genes [BR:
plij01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KQP88_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QWU85071
LinkDB
All DBs
Position
2292962..2294161
Genome browser
AA seq
399 aa
AA seq
DB search
MFNLKSKAGYSGGILLFVVALSGCEKQQETAVPKPFEVGVITVKTSSVPVYSDLSGRTSA
FLVSQVRARVDGIVLHREFMEGANVKAGQRLYKIDPAPYVAALNSAKATLARAKANLVAQ
NAQVERYQVLVAGNAISKQTYDNAVATHGQAAADVAAGQAAVERAQINLSYTDVVSPISG
RIGVSDVTPGAYVQASGATLMATVQQLDPMYVDLTQSSASGLKMRTDIQEGRLQTQGSGA
VKVALTLENGRAYSHLGKLQFSDVSVDQGTGSVTVRAVFPNKDQMLLPGMFVRARLEEGT
NASAMLIPQVGITHDQSGRPIALVVGRDDKVSQAVLTTAGTRGSDWVVTSGLKPGDRVIV
EGTGKVRPGSLVKTVPAQQHGATATGSAPETESNPSPRA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatttaaagtcaaaagccggttactccggcggtattctgctgtttgttgttgcc
ctctcagggtgcgagaaacagcaagagactgctgtgccgaagccttttgaggtcggtgtc
attacggtgaaaaccagttcggttcctgtatacagcgacctctctggacgcaccagtgcg
ttcctggtgtcgcaggtgcgcgcccgagtggatgggatcgtcttacatcgtgaattcatg
gaaggcgctaacgtcaaggcgggccagcggctctataaaattgatcctgcaccctatgtc
gcagcgctcaatagcgcgaaggctaccttggcgagggcgaaggctaaccttgttgcgcaa
aacgctcaggtcgagcgctatcaagtgctggtagctggcaacgcgatcagcaagcaaacc
tatgacaatgcagtcgccacccatggccaggcagccgcagacgtcgcagcgggtcaggca
gcagtggagcgcgcgcagatcaatctcagttacaccgacgtcgtatcgcccatcagcgga
cgcataggcgtgtcggacgtcactcctggtgcttacgtgcaagccagtggcgcgaccctt
atggcaaccgtccagcagcttgatccgatgtacgtcgaccttacgcagtcaagcgcaagt
gggctgaagatgcgtaccgacattcaggaagggcgtctgcaaactcaaggaagcggcgca
gtaaaagtagcgctcactttggaaaatggtcgtgcgtattcgcacttgggaaagcttcag
ttttcggacgtgagtgttgaccaaggtaccgggtcggtaaccgttcgggcggtattcccc
aacaaggatcaaatgctgttgccgggaatgtttgtgagagcgcgtcttgaggaaggcacc
aatgcgagcgccatgcttattcctcaggtaggcattactcatgatcagtcaggccggccg
atcgcgttggttgtggggcgggatgacaaggtctcgcaagctgttctgaccaccgcaggg
acacgcggcagcgactgggtagtgacgagtggattgaaacctggtgaccgcgtgatagtg
gagggtactggcaaagtccgccctggctcactggtcaagaccgttcctgctcagcagcat
ggcgccacagccacgggctctgcgcccgaaaccgaatccaatcctagcccccgcgcatag
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