Pseudomonas lijiangensis: KQP88_10275
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Entry
KQP88_10275 CDS
T08713
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
plij
Pseudomonas lijiangensis
Pathway
plij01501
beta-Lactam resistance
plij01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KQP88_10275
01503 Cationic antimicrobial peptide (CAMP) resistance
KQP88_10275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plij03036
]
KQP88_10275
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plij02000
]
KQP88_10275
01504 Antimicrobial resistance genes [BR:
plij01504
]
KQP88_10275
Chromosome and associated proteins [BR:
plij03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KQP88_10275
Transporters [BR:
plij02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KQP88_10275
Antimicrobial resistance genes [BR:
plij01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KQP88_10275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
BSH_CusB
BSH_CzcB
Beta-barrel_RND_2
CzcB_C
YknX_C
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
QWU85602
UniProt:
A0ABX8I0Q6
LinkDB
All DBs
Position
complement(2346239..2347417)
Genome browser
AA seq
392 aa
AA seq
DB search
MSLCIVFALASPLLLTACGNPPGGPPPAEGTPVMGITTVKSQPVDLTTELPGRTTPYLIA
EVRPQVNGIIQERTFREGADVKAGETLYRIDPATYKASYDNYLATLGKAQANQRSLRLKA
ERYKELITIKAVSQQEYDDTDAELGQANAEVNAAKANVESARITLAYTRVTAPISGRISK
SAVTPGALVTDSQTTALTTIQQLDPIYVDVTQPSMSLLRLKRSMARGELEKSGESAARVR
LMLEDGSQYPFEGRLEFSDVTVDQNTGSITLRAVFPNPQAELLPGMYVRAVLQEGTQQNG
ILIPQQAVSRNSAGKPVVYVVGKDSRLELRALDTDRTVGDQWLVRSGLQPGEQIVVDGIP
RAQPGAEVKTTPWQPKAVTANAPSSAPASASN
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ctgagtctttgtattgtttttgcgcttgcatcacccttgctgctgacggcgtgcggcaac
ccgcccggcgggcctccacccgcagaaggtactccggtgatgggcatcacgacggtcaag
tcccagcccgtcgacctgaccacagagcttcccggacgcacgactccgtacctgatcgca
gaagttcgtcctcaggtgaacggcatcattcaggaacgtactttccgcgaaggggctgac
gtcaaggcaggcgaaacgctgtaccggattgacccggccacctacaaggccagttacgac
aattacctggccaccctcggcaaggcccaggccaatcagcgttccttgcgcctcaaggca
gaacgttacaaggagctgattaccatcaaggccgtcagtcagcaggaatacgatgacacc
gacgccgagctgggacaggccaatgccgaggtcaatgccgccaaggcaaacgtcgaaagt
gctcgcatcacgctcgcctatacccgagtcacagcccctatatccgggcgcatcagtaaa
tcggccgtcacccccggcgcactggtgaccgacagtcagaccacggcgctgaccaccatt
cagcaactcgatcccatctatgtagacgtgactcagcccagcatgtcgctgctgcgcctc
aagcgctccatggcacgtggcgaactggagaagtccggtgaatccgctgccagagtccgg
ttgatgctggaggacggcagtcagtatccgttcgaggggcgactggagttctcggacgtc
acagtggaccagaataccggctccatcaccttgcgggccgttttccccaaccctcaggca
gaactgctgccgggcatgtatgtgcgtgcggtgctgcaggaaggcactcaacaaaacggc
atcctgatcccgcaacaggctgtttcgcgcaacagtgcaggcaagcccgttgtttatgtc
gtcggcaaggacagcagactcgaactccgtgccctggataccgatcgcaccgttggcgac
caatggctggtccggtcaggcctgcaacctggcgagcagattgtggtggacggcatcccg
cgtgcccagccgggtgccgaagtcaagacgacgccctggcagcccaaggctgttactgcg
aacgctccctcatcagcgccagccagcgcctcgaactaa
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