Pseudomonas lijiangensis: KQP88_11105
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Entry
KQP88_11105 CDS
T08713
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18298
membrane fusion protein, multidrug efflux system
Organism
plij
Pseudomonas lijiangensis
Module
plij_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plij02000
]
KQP88_11105
01504 Antimicrobial resistance genes [BR:
plij01504
]
KQP88_11105
Transporters [BR:
plij02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KQP88_11105
Antimicrobial resistance genes [BR:
plij01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
KQP88_11105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
CusB_dom_1
PliI
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QWU85268
LinkDB
All DBs
Position
complement(2545408..2546649)
Genome browser
AA seq
413 aa
AA seq
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MSQSLSHLRYPLTALALVLISACGRAPEAIMAPAAAKVSVAKVLEQPINEWDEFTGRLEA
PETVEVRPRVSGQIDQVAFTDGSLVKKGDLLFQIDPRPFQAEVRRLEAQLQQARAVANRS
ENEAERGERLRTNNAISAELADSRTTSAQEAKAGVAAIQAQLDVARLNLSFTRVTAPISG
RVSRAEITAGNIVTADVTPLTSVVSTDKVYAYFDADERVFLKYTELARKGQRGQTTPVYL
GLSNEAGNPHLGQMNFVDNQVNPRTGTIRGRAVFDNTDGSFTPGLYARLKLVGSGTYSAV
LINDEAVGTDLGKKFVLVMDKDNKPTYRFVELGPKVEGLRIVRSGLGKDDTIIVKGLQRV
RPGQPVDPEVTPMASSETLAALLKQRQALEASNLSQVAPKAAVKIASATAPRG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtctctctctcatttgcgctatcccctaaccgccctggcactggtcctgata
agtgcctgcggacgcgcaccagaggccatcatggctccagcagcggccaaagtcagcgtc
gccaaagtgctggaacaaccgatcaacgaatgggatgaattcacgggtcgcctcgaagcg
ccggaaaccgtcgaagttcgtccacgggtttccggccagatcgatcaggtggcctttacc
gatggctcactggtcaagaaaggcgacctgctgttccagatcgacccacgtcctttccag
gccgaagtccgtcgtcttgaagctcaactgcaacaggctcgcgccgtggccaaccgcagt
gaaaacgaagccgaacgcggtgagcgcctgcgcaccaacaatgcgatttccgccgaactg
gccgactcgcgcaccacctcggcccaggaagcaaaagccggcgtcgcggcgattcaggcg
caactggacgtggccaggctcaacctgagcttcacccgcgtcactgcgcccatcagcggg
cgcgtcagccgtgccgagatcactgccgggaacatcgtgactgccgatgtcacgccgctg
accagtgtggtttccaccgacaaggtctacgcctacttcgacgccgacgagcgcgtattc
ctcaagtacaccgaactggcacgcaagggccagcgtggccagaccactccggtctatctg
gggctgtccaacgaagcgggcaaccctcacctgggccagatgaacttcgtcgataaccag
gtcaacccgcgtaccggcaccattcgcggtcgcgccgtgttcgacaacaccgacggcagc
ttcactccaggcctgtacgcacgcctcaagctggtgggcagcggcacctattcggccgtg
ctgatcaacgacgaagccgtgggcaccgatctgggcaagaaattcgtactggtgatggac
aaggacaacaagccgacctatcgcttcgtcgagctgggccccaaggttgaaggtctgcgc
atcgtgcgcagcggcctgggcaaggacgacaccatcatcgtcaaaggcttgcagcgcgtt
cgccctggacagcctgtagaccctgaagtgacgccaatggcctccagcgaaacactggct
gcactgctcaaacaacgccaggccctcgaagccagcaatctgtcacaagtggcgcccaag
gcggccgtcaaaatcgccagcgcaactgcgcctcgtggctaa
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