Candidatus Planktophila limnetica: PHILAsVB114_04060
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Entry
PHILAsVB114_04060 CDS
T05067
Name
(GenBank) isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PHILAsVB114_04060
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plim01007
]
PHILAsVB114_04060
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plim03016
]
PHILAsVB114_04060
Enzymes [BR:
plim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
PHILAsVB114_04060
Amino acid related enzymes [BR:
plim01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PHILAsVB114_04060
Transfer RNA biogenesis [BR:
plim03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PHILAsVB114_04060
Prokaryotic type
Other AARSs
PHILAsVB114_04060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
GP52
Motif
Other DBs
NCBI-ProteinID:
ASY27814
UniProt:
A0A249LFV6
LinkDB
All DBs
Position
767174..770284
Genome browser
AA seq
1036 aa
AA seq
DB search
MVFRPISAQIDLAAMEHSILDFWRTNLIFEKSVSGREGAPTWTFYEGPPTANGMPGTHHI
EARVFKDVFPRFHTMKGKQVVRKAGWDCHGLPVEIAVEKELGFNGKGDIEKFGIAQFNDK
CRESVTRHVDAFTAMTNRMGFWVDFDQAYWTMAPAYVESVWWSLAQIHKKGLLVQDHRVA
PYCPRCGTGLSDHELAQGYETVTDPSVFVRFPITSGPLKEIGAALLVWTTTPWTLVSNTA
IAVNPKVNYVIAKVTHEQTSEVLVIAEALLDKLQGEVEILKTVLGKDLERTTYSRPFDFV
EIPDAHFVVLADYVTTEDGTGLVHQSPAFGADDLQVCRAYGLPVVNPVAPDGHFLADVEL
VGGMFFKDADKPLVKELKARGLLYRHQPYEHSYPHCWRCHTALIYYAQPSWYIRTTSIKD
ELLRENAATNWYPETIKTGRYGDWLNNNIDWALSRNRYWGTPLPIWRCENKHEVCIESLA
DLGARAGQELSSLDPHRPFVDDITFACTECSETMVRVPEVIDCWYDSGAMPFAQWGYPHQ
EGSKEKFEASYPADFICEAIDQTRGWFYTLMTIGTLVFDKSSYENVLCLGHILDKDGRKM
SKHLGNVLEPMALMDQHGADAVRWYMLAAGSPWSARRVGHDAISDVVRKTLLTYWNTISF
HSLYAQASNFDLSQSPPRSTRPVMDRWIISELSILINEVESCLSNFDSQGAGKVLAQFID
DLSNWYVRRSRRRFWDGDVAALATLHECLSTLTQLLAPMVPFISEHVWQELVRPVDPTVA
DSVHLSDFPVANPSDIDTQLSAQVGLTRRIVELGRAARAESGIKIRQPLQRALIAASGWA
ALPADMREQIADELNVADLADIADADGDLVDISVKANFRTLGAKFGGQVQEISKAIAAMD
ATTLVKTLRAKGSADVATWSIELDDLVITEVPRTGWMVASHEAESVALDLTLTPELIAAG
NVREVIRFIQEARKTNGFDISDRIRISWNAPDEIANAVDAARDHISAEVLATEFTRDAGL
ATLEGELGFNAKLQKS
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggtatttcgcccgatttcagcccagatcgatcttgccgcaatggagcactcgatcctt
gatttctggcgcaccaatctaatctttgaaaaatctgtcagtggccgagaaggtgcaccg
acgtggactttctatgaaggtcctcccactgcaaacggaatgcctggaacgcaccatatt
gaagcgcgcgtatttaaagatgtattcccgcgttttcacactatgaaaggcaagcaagta
gttcgcaaagctggatgggattgtcacggtctgcctgttgaaattgctgtagagaaagag
ctgggctttaacggcaaaggcgacatcgaaaaattcggtattgcccaattcaatgacaag
tgccgtgaatcagtaactcgtcacgttgatgcatttactgccatgactaatcgcatgggt
ttttgggttgattttgatcaagcgtattggacgatggcacctgcatacgttgaaagtgtt
tggtggagtcttgctcagattcataaaaaaggattgctcgttcaagatcatcgcgttgca
ccatattgtccgcgttgtggaacaggattatctgatcacgaattagcacaaggctatgaa
actgtgacagatccatctgtcttcgttcgctttcctattacatctggtccactaaaagag
ataggcgcagcccttcttgtctggacaactacgccatggactctggtttcaaatactgcc
attgccgtaaatcccaaggttaattacgtcatcgccaaagttacccatgagcaaacttca
gaagtacttgtgattgcagaagctctgctggataaattacaaggtgaggtggaaatcctt
aaaaccgtactcggcaaagatcttgagcgaactacatattccagaccttttgattttgtt
gagattcctgatgcgcacttcgttgtcttagccgattatgtgaccactgaagatggaaca
ggattagtccaccaatcccccgcatttggcgcagatgacttacaggtttgtcgtgcctat
ggattaccagttgttaatccagttgcacctgatgggcatttcttggcagatgttgaacta
gtcggtggaatgttttttaaagatgccgataagccattagtcaaagagttaaaggctcgt
ggattgctctatcgccaccaaccttatgagcactcatacccacattgctggcgctgtcac
accgcacttatctattacgcacaaccatcgtggtatatccgcaccacttcaattaaggat
gaactcttgcgtgagaacgcagcaacgaattggtatccagaaacgattaaaactggtcgc
tatggtgattggctcaataacaatattgactgggcgctctctcgtaatcgctattggggc
actccacttcctatttggagatgtgaaaacaagcatgaggtatgtatcgaatcattagct
gatctcggtgcacgcgctggtcaagaattatcatcccttgatccgcatcgtccattcgtc
gatgacataacttttgcctgcaccgaatgctcagaaaccatggtgcgtgttcctgaagta
attgattgttggtatgactctggtgcaatgccatttgcccagtggggttatccgcatcaa
gaaggcagcaaagaaaaattcgaagcctcataccctgccgatttcatctgcgaagcaatt
gatcagacccgtggttggttctacacactcatgacaattggaactctggtctttgataaa
tcatcctatgaaaatgttctctgcctcggccacatccttgataaagatggtcgcaagatg
agtaagcacctaggaaatgttttagagccaatggcactgatggatcagcacggcgccgat
gcagttcgttggtacatgttggccgcaggttcgccatggtctgcgcgtcgagttggccac
gatgccattagcgatgttgtcagaaagacgcttttaacttactggaacacaatctcgttt
cactcactctatgcacaagcatctaactttgatctctctcaatcaccgccgcgcagcact
cgccctgttatggaccgttggataatctctgaattatcaattctcattaacgaagtggag
tcatgtcttagcaactttgattcacaaggtgctggaaaagtgctggctcaatttattgac
gatttatcaaattggtatgtgcgtcgctcacgacgtcgtttctgggatggcgatgtcgca
gctcttgcaaccttgcacgaatgtctttcaactctcacacaattacttgctccgatggtt
ccgtttatctcagagcatgtctggcaagaacttgtgcgaccagtagatccaacagttgct
gattcagttcacttatctgatttccctgttgctaacccttcagatatcgacacacaacta
tctgctcaagttgggctcactcgcagaattgttgaattaggaagagctgctcgcgccgaa
tctggaattaagattcgccaaccactgcaacgagcactcatcgcagcaagtggctgggca
gcattgccagcagatatgcgcgaacaaatagctgatgagttaaacgtggccgaccttgca
gatattgcagatgccgatggcgatctcgttgatatttcagttaaagcaaactttcgaaca
cttggtgccaaatttggtgggcaagtgcaggaaatctccaaagcaattgctgcgatggat
gccacaacattggtaaagacacttcgggccaagggcagtgcagatgttgccacctggagt
atcgaattagatgatctggttatcactgaagtgcctcgcactggatggatggttgctagc
catgaagcagagagcgtggcgctagatctaacgctaactcctgaattaattgctgctgga
aatgtgcgagaggtaattagatttattcaagaagcccgaaaaacaaatggctttgatatt
tcagatcgcattcgtatttcgtggaacgcacccgatgagattgctaacgccgtcgatgct
gcccgcgatcacatcagcgctgaagttttagctactgaatttactcgagatgccggctta
gcaactcttgagggcgaacttggttttaatgcgaagttgcaaaagagttaa
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