Candidatus Planktophila limnetica: PHILAsVB114_06035
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Entry
PHILAsVB114_06035 CDS
T05067
Symbol
kgd
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim00020
Citrate cycle (TCA cycle)
plim00630
Glyoxylate and dicarboxylate metabolism
plim00785
Lipoic acid metabolism
plim01100
Metabolic pathways
plim01110
Biosynthesis of secondary metabolites
plim01120
Microbial metabolism in diverse environments
plim01200
Carbon metabolism
plim01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PHILAsVB114_06035 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
PHILAsVB114_06035 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PHILAsVB114_06035 (kgd)
Enzymes [BR:
plim01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PHILAsVB114_06035 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
PHILAsVB114_06035 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
PHILAsVB114_06035 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
PHILAsVB114_06035 (kgd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ASY28164
UniProt:
A0A249LGV2
LinkDB
All DBs
Position
complement(1147566..1151312)
Genome browser
AA seq
1248 aa
AA seq
DB search
MSAKDPNQDFGANEWLVDEMYERYLADPTSVEPSWIEFFKTYSPTNNSSAATSAPIASAP
RGGVPPTPKAASAAPVVTPAPVASTPAPVASTPAPVAPVAATPTSATQKLVRDRSLQSPT
PADPIVKPVPVLSTPDAARLEPIRGISARVVASMEGSLSVPTATSVRAVPAKLMIDNRIV
INNHLKRARGGKVSFTHLIAFAMIKALRQMPEMNAFFGDIEGKPAIGHPQHINLGIAIDL
AKADGSRQLLVPSIKGCEDLDFAQFWNAYEAIVGKARGGTLTVEDFAGTTVSLTNPGTLG
TVHSVPRLVQGQGLIIGVGALDYPAEFHGASEETLARMAISKVVTLTSTYDHRIIQGAQS
GDFLRRIHELLLGAEHFYEDIFAAIRIPYEPIRWAQDFEFSKDEEINKTARVQQLIHAYR
TRGHIMADTDPLEYRQRSHPDLDIVTHGLTLWDLDREFATGGFGGEKFMKLRRILGILRD
SYCRTVGIEYMYIQSPEERNWIQERVEVGVQTFPREEQLRILRKLNSAEAFETFLQTKFV
GQKRFSLEGGESVIPILDAVISSAAERGLDEVCIGMPHRGRLNVLANIAGKSYGQIFQEF
EGHYKENDVQGSGDVKYHLGTEGVFTAESGAKTKIYLAANPSHLEAANPVLEGIVRAKQD
RLNVKNAYSVLPILLHGDAAFAGQGVVAETFQLSQLAGYRTGGTVHIVVNNQVGFTTSPH
ASRTSRYSTDMAKIIQAPVFHVNGDDPEACVRIARLAFEYRQEFNRDVVIDMVCYRRRGH
NEGDEPSFTQPLMYKLIDAKRSTRNLYTEALIGRGDISSEQADELAREYQMQLEAVFAEV
HNIEPEVDPNFKAPVAANPETLVSSIDEATARTIAATQIAVPDGFNVHPKLLPQLQKRVE
MLNDGTIDWSMGETLAFGSLLLEGRPIRLAGQDSRRGTFSNRHAVIVDKVNGNEWTPLRA
LISDESQFFVIDSLLSEYAAMGFEYGYSVVRDEALVLWEAQFGDFANGAQTIVDEFISSA
LQKWGERSSIVLLLPHGYEGQGPDHSSARIERFLALCAEGNMTVAQPSNPASYFHLLRWH
AKNPTRRPMVVFTPKSMLRLRAAASKLQDFTTGQFQKLIPDDIVQNATRVIFCSGRIYHD
LVAERAARKEDTTAIIRLELLYPLPAAEMAAEAAKHPNANLLWVQDEPANQGPWPFVALR
TAEQFGGEGFGGRTLRRVSRRATASPATGNHHLHEEEQKALLMEAFTR
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcaaaagatccgaatcaggactttggagccaatgaatggctcgtcgacgaaatg
tacgagcgctacctagcagacccaacttcggttgaaccatcgtggattgaattctttaaa
acttatagcccaacaaataattcttcagccgcaactagtgcgccaattgcatcggcaccc
cgtggcggagttccaccaacaccaaaagctgcaagtgccgcaccagttgttacaccagca
cctgttgcatcaacaccagcacctgttgcatcaacaccagcaccagttgcacccgttgca
gcaacaccaacttctgcaacacaaaaacttgttcgtgatcgctcactgcaatcgccaacg
ccggctgatccaattgttaaacctgttccagtattaagcacaccagatgccgcgcgactt
gaaccaattcgcggcataagcgctcgcgttgttgcaagtatggaaggttcattaagtgtt
ccaactgctacaagtgtgcgcgctgttcctgctaaattaatgattgataatcgaattgtc
attaacaatcacctcaagcgcgctcgcggtggaaaagtttccttcacacacttaattgca
tttgcaatgattaaggcacttcgacaaatgccagagatgaatgcattcttcggagacatt
gaaggcaaaccagcaatcggtcatcctcaacatatcaacctcggtattgcaattgattta
gctaaagcagatggatcgcgccaattattggtgccatctattaaaggttgcgaagattta
gattttgcacaattttggaatgcttatgaggcaattgtcggcaaagcccgtggaggcact
ttaactgttgaagattttgcaggcacaacggtttcccttacgaatccaggaacacttgga
actgttcactctgtgccacgcttggtgcaaggacaaggcttaatcattggtgttggtgca
cttgattaccctgcagagtttcatggagcaagtgaagaaactcttgcacgcatggcgatt
agcaaagttgtcactctaacaagtacatacgatcaccgaattattcaaggtgcacaatca
ggtgatttccttcgccgtattcacgaattattacttggcgccgaacatttctatgaagat
atattcgctgcaattcgaattccttacgaaccaattcgctgggcacaggactttgaattc
tccaaggacgaagagatcaataagacggctcgtgttcaacaattaattcacgcatatcgc
acacgcggtcacatcatggccgatactgatccacttgaatatcgccaacgctctcaccca
gatctcgacattgttactcatggattaactctgtgggatcttgatcgcgaattcgcaact
ggtggatttggtggcgaaaagtttatgaagcttcgcaggattcttggaatcttgcgtgat
tcatattgccgcacagttggaattgaatatatgtatattcaaagtccagaagaacgtaat
tggattcaagaacgtgttgaagttggcgtgcaaacattcccacgtgaagaacaattacga
atcctgcgcaaactaaatagcgcagaagcatttgaaactttcttgcaaactaagttcgtc
ggacaaaagcgcttctcactcgaaggaggcgaatctgtaattccaattctggacgcagta
atttctagtgcagcagagcgcggattagatgaagtgtgtattggaatgccacaccgcggc
cgattaaatgttcttgcaaacattgctggtaagtcttacggacaaatcttccaagagttt
gaaggtcactacaaggaaaatgatgtgcaaggttcaggagatgtgaagtatcaccttggt
acagaaggtgtattcaccgcagaatctggtgcgaaaacaaagatttacttggcagcaaat
ccttctcaccttgaagcagctaacccagtgctagaaggcattgtgcgcgctaagcaggat
cgtctaaatgtgaagaatgcgtattcagtgctaccaattcttcttcacggcgatgctgca
tttgctgggcaaggcgttgttgcagaaacgttccagctctcacaattagcgggctatcgc
acaggtggaacagttcatatcgttgttaataaccaagttggttttacaacatcaccacat
gcatcacgcacatctcgttattcgacagatatggcaaaaattattcaagcgcctgtgttc
catgtaaatggtgatgatccagaagcatgtgtacgcatcgcacgtttagcatttgaatat
cgccaagagttcaatagagatgttgttattgatatggtttgttaccgccgtcgtggtcac
aacgaaggcgatgagccatcctttacacagccgcttatgtataaacttattgatgcaaag
cgctcaactcgtaatctctatacagaagcactcatcggtcgtggcgatatttcaagcgaa
caagcagatgagcttgcacgcgagtaccaaatgcaacttgaagcagtctttgccgaagtt
cataacatcgaaccagaagtagatccaaactttaaagcaccagttgctgctaatccagaa
acgctagtttctagtatcgatgaagctactgctcgcacaattgctgcaacacaaattgca
gttccagatggatttaacgttcatccaaagctattgccgcaactgcaaaagcgcgttgag
atgcttaacgacggaactatcgattggtcaatgggtgaaacactcgcctttggttcacta
ttacttgaagggcgaccaattcgtttggcaggacaagattcacgtcgaggaacatttagt
aatcgtcacgcagtaatcgttgataaagtaaatggaaatgagtggactccacttcgcgca
ttaattagcgatgagagccaattctttgttattgactctttgctctctgaatatgcagct
atgggctttgaatatggctattcagttgtgcgagatgaagcgctagttctgtgggaagcg
cagttcggtgatttcgcaaatggcgcgcaaacaattgttgatgaatttatctcatcagcg
ctgcaaaaatggggcgagcgttcttcaattgttctcttgttgccacatggttatgaagga
caaggcccagatcactcatctgcgcgcattgaacgcttcttagcattgtgcgcagaagga
aacatgacagtggctcaaccatctaatccagcgtcgtatttccatctgctcagatggcat
gcaaagaatccaacacgtagaccaatggttgtcttcacacctaaatcaatgttgcgctta
cgcgctgctgcatcgaagttacaagatttcacaaccgggcaattccaaaaattaattcca
gatgacatcgttcaaaatgccactcgcgttattttctgctctggtcgtatttatcacgat
cttgtcgcagagcgcgccgcgcgcaaggaagatacaactgcaatcattcgtctagaactt
ttgtatccactacctgctgcagaaatggcagcagaagctgcgaaacatccaaatgcaaat
cttttgtgggtacaagatgaaccagctaaccaaggaccttggccattcgttgcacttcgc
acagcagaacaatttggtggagaaggatttggcggaagaacattgcgccgcgtatcacgt
cgcgcgactgcaagtcctgcaactggcaatcatcacttgcatgaagaagaacaaaaagct
ttgttaatggaagcctttacccgctaa
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