Polaribacter litorisediminis: K8354_17420
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Entry
K8354_17420 CDS
T07786
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
plit
Polaribacter litorisediminis
Pathway
plit01501
beta-Lactam resistance
plit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K8354_17420
01503 Cationic antimicrobial peptide (CAMP) resistance
K8354_17420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plit03036
]
K8354_17420
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plit02000
]
K8354_17420
01504 Antimicrobial resistance genes [BR:
plit01504
]
K8354_17420
Chromosome and associated proteins [BR:
plit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K8354_17420
Transporters [BR:
plit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K8354_17420
Antimicrobial resistance genes [BR:
plit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K8354_17420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
DUF6671
DUF5376
Motif
Other DBs
NCBI-ProteinID:
UAM98040
LinkDB
All DBs
Position
complement(4087023..4088081)
Genome browser
AA seq
352 aa
AA seq
DB search
MNRYKFLLFLVFFSCLNKLEVPEIDKKLSKKKSYKLNVIIDKIDKYSFNYQIVTNGKISA
VNKIDLRFNSNEKIAIISIYNGQNVNKGKLLASLQNNLLKSDIEKSFIDQEKSEIKLEEE
KVNYNNNLTKERIRNLEIKSGVLQAKNNLERVQIIYNQTLLKAPFSGVIANLEKKEGDFI
TTADVFCTLINPNKLEVFFSVLENEFQFVSIGQEIEILSFVNNDESLKGRITEINPLVDK
NGLIKIKAKVLSKETNLLDGMNVKVIINKPLKDVIVIPKEALVLRSNRQVVFTLEKGLAK
WNYVEVAGENNNSYAIKKGLKVSDTIIVSGNLNLSHDAKVNTTFIDKEINIK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttataagtttttactatttcttgtatttttttcctgcttaaataaattagaa
gtacctgaaattgacaaaaaattaagtaaaaaaaagtcgtataaattaaatgtcattata
gataaaatagataaatattctttcaattatcaaatcgtaactaatggtaaaataagtgca
gtaaataaaattgatctaaggtttaattcaaatgaaaaaatcgctattattagcatatac
aatggacaaaatgttaataaaggtaaattgttagcatctttacagaataatcttttaaaa
agcgatatagaaaaatcttttatagatcaagaaaaatcggaaattaagcttgaagaagaa
aaagtaaattataataataacttaacaaaagaaagaattagaaatttagagattaaaagc
ggtgttttacaagctaaaaataatttagaaagagtacaaattatatataatcaaactcta
ctaaaggctcctttctctggggtaattgcaaatttagaaaaaaaagaaggtgattttatc
acaactgcagatgtgttttgcacgttaatcaatccaaataaattagaagttttcttttcg
gttttagaaaatgaatttcagtttgtttcaattgggcaagaaattgaaatactctctttt
gttaacaatgatgaatcgttaaaaggcagaataacagagattaacccactagttgataaa
aatggtttaattaaaattaaagccaaggttttaagtaaagaaactaatttactagatggt
atgaatgtaaaagttataataaataagcctttaaaagatgttattgtgataccaaaagaa
gctttagttttacgctcaaataggcaagttgtttttactctagaaaaaggattggcaaaa
tggaactatgtagaagtggctggagaaaataataatagttatgcaattaaaaaaggttta
aaagtttcggacactattatagtttcaggtaatttaaatttatctcacgatgcaaaagtt
aatactacttttattgataaagaaataaatataaaataa
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