Planctopirus limnophila: Plim_1943
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Entry
Plim_1943 CDS
T01225
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
plm
Planctopirus limnophila
Pathway
plm00790
Folate biosynthesis
plm01100
Metabolic pathways
Module
plm_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Plim_1943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plm03016
]
Plim_1943
Enzymes [BR:
plm01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Plim_1943
Transfer RNA biogenesis [BR:
plm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Plim_1943
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
TP_methylase
Herp-Cyclin
Motif
Other DBs
NCBI-ProteinID:
ADG67773
UniProt:
D5SXT6
LinkDB
All DBs
Position
2529739..2530521
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AA seq
260 aa
AA seq
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MPTDLSTLPSAKKTGHSSARLRIAETFLSVQGEGALTGVRSFFIRTTGCNLRCWFCDTPY
TSWTAEGNWQTIDELLAQATASGAEHVILTGGEPLLQPAIVELSHALKAAGLHITVETAG
TVDRPVMADLMSISPKLANSNPTAAPDFPVNPTAVRGSQGAVARRHSELRWNIATLTRLT
TDYPYQLKFVIDTPADLDALSEALTELPHVPPEHVWLMPQGITQEELALRGAWLKPLAES
QGYNFCPRLHIEWFGHRRGV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgatctttccactcttccttctgctaaaaaaacaggccacagttctgcgcgc
ctgcgtattgccgaaacctttctttcggtgcagggggagggtgcgctgacgggcgtgaga
tcgttttttatccgcacgacgggctgcaacctgcgctgctggttttgcgatactccgtac
acctcgtggacagccgaaggaaactggcagaccattgatgagttgctggctcaggccact
gccagtggagcggagcacgtcattctgactggaggtgaaccactccttcagcccgcgatt
gtcgaacttagccacgcgctgaaggctgccgggctccatatcactgtagaaacagcagga
acggtcgaccgtcccgtgatggcagacctgatgtcgatcagcccgaagctggcgaattcg
aaccccactgccgcacccgattttcctgtaaatcccactgcggtgcggggaagccaaggc
gcggtcgcccgcagacactctgagctgcgctggaacatcgccacgctcacacgtctgacg
actgactacccgtatcagctcaaatttgtgatcgatactcccgctgatctcgatgcactt
tcagaggctcttactgagttgccgcacgttccgccggaacatgtctggttgatgccccag
gggatcacacaggaagaactcgccttgcgtggagcctggctcaagccactggcagaatcg
caaggctacaacttctgcccccgcctccacatcgaatggttcggccaccgccgcggcgtg
tga
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