Planctopirus limnophila: Plim_2426
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Entry
Plim_2426 CDS
T01225
Name
(GenBank) Isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
plm
Planctopirus limnophila
Pathway
plm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Plim_2426
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plm01007
]
Plim_2426
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plm03016
]
Plim_2426
Enzymes [BR:
plm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Plim_2426
Amino acid related enzymes [BR:
plm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Plim_2426
Transfer RNA biogenesis [BR:
plm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Plim_2426
Prokaryotic type
Other AARSs
Plim_2426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ADG68252
UniProt:
D5SPA8
LinkDB
All DBs
Position
3161364..3165542
Genome browser
AA seq
1392 aa
AA seq
DB search
MFSKVNDAEFITGEHTVLKFWNERHIFQKLRAKNAGKQPWSFLDGPITANNPMGVHHAWG
RTYKDSFQRYWAMNGRDLRYQNGFDCQGLWVEVEVEKQLGLGAKSAIEEFGIDKFVQECK
RRVLKYAAIQTEQSVRLGYWMEWDRPEELRKLASAIGSETPVTLTTPKGITETAPAEQLV
SRLGNPDWGGSYFTFSTENNETIWTFLKKCFERGKVYRGHDVMPWSGRGGSAYSQMEVAD
GRKLTTHRALFVRFPLLDDAGQETKENLLIWTTTPWTLTSNVAAMINPELEYVKLQSKKD
GLVYYFAKDNLEFQRLAKEFKEGFGRPEWQWPKGTPKLKTLSQIFKESGGYEVLETVKGE
ALVGRKYRGPFDELDAQNSAGGAPRSSAYTSSRGNLEDLLLNDFYGPTLQNDAFADSLKA
TYNSEVLKINEALDKYKTDDADIYNVMVDLSIDKKNELAASFVAIRFAIIRSQVLHLLRN
IRAILKKHKNLGFFSAELNPSMTLREIKDLLVRLGSTSFLKSECWLTLEEVSLLIEEFEN
HDEREEFDNERMIQHEDLLFEGNLLFSEGLFCNDSTSLIARLHSTLVLQLDTELQGLARR
SAVECHRVIDGGRDFKGAPNVKEGEGTGIVHSAPGCGDVDHQIGLANGLPTIAPLGPDGN
FLEGFGPFTGKNAVHPDTVQLVIDSLKEKGLLVAEEKYPHIYPFCWRTGDELVFRLVDEW
FINMDWRDEIMGVTRQINWLPDSIQGQEREVEWLTNMRDWMISKKRYWGLALPIWVDELT
GDFEVIGSLAELKERALDGGEGWNDFQGHTPHKPWIDGVKIRNPKTGNLMTRVEDVGNPW
LDAGIVSFSTMGYNTHPDMWKKWYPADLVTECFPGQFRNWFYSLLSMATMMDGTPPFKTL
LGHRLVMNEQGQPMHKSDGTAIWFEEAAEQIGVDAMRWMYLQQNPASDLRFGTRHPDEKV
TLETVNGPTNTTIDGVPTCKVTSGPADEVRRQVLIPLWNSYAFFVNYARLDEFDPNAAIV
PVAERPEIDRWLLSNLQALIQQVRAGFEAFDTPAACAALARFIDDLSNWYIRRNRRRFWR
SKDTGDLDKRAAYQTLYETLLTLTKLMAPMTPFLAERMYGNLTSGQPDAPESVHLCDYPT
ADESLLDTSLNRRMSLAQTVVRVAHKLREVADQRVRQPLAELRFATLSSDDLTSISSLKD
VIADELNVKAVSGFESLGDIVKYTYKPNLKTLGPKYGKLLNAFREELPKLPGNLLESLRR
GQTINATVGGEAVIIGPDDVLIGADQAEGWVAGDESGIQVALSTTLTPELVMEGMARDFI
RHIQQARKDANLEIQQRITVNYQTSEPIVAEMLKEWSDLISSETLANEITPASGLSGKPV
QVGAAEVIITIK
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaaagtcaacgacgccgaattcatcacgggtgagcacaccgtcctcaagttc
tggaacgaacgccacatcttccagaaactccgggccaaaaacgccggcaaacagccctgg
agttttttggacggcccgatcactgccaacaatcccatgggtgtccaccacgcctggggc
cgcacctacaaagattccttccaacgctactgggccatgaacggccgcgacctccgttac
cagaacggattcgactgccagggcctctgggtcgaagtcgaagtcgaaaagcaactcggc
ctcggtgccaaaagtgccatcgaagagttcggcatcgataagttcgtgcaggagtgtaaa
cgccgcgtgctgaagtacgccgccatccagaccgaacaatccgtccgcctcggctactgg
atggaatgggatcgcccggaagaactccgcaaactggcctcagccattggcagcgaaacc
cccgtcaccctcaccacccccaaaggcatcaccgagaccgcaccagccgaacaactcgtc
tcacgcctcggcaaccccgattggggcggcagctatttcaccttctcgaccgaaaacaac
gaaaccatctggacattcctcaaaaaatgcttcgaacgcggcaaggtctatcgcggccac
gacgtcatgccctggtccggtcgcggcggcagtgcctacagccagatggaagtcgccgac
ggacgcaaactcaccacccaccgcgccctcttcgtccgctttccactccttgatgacgcc
ggacaggaaaccaaggaaaacctcctcatctggacgacgactccctggacgctcaccagc
aacgtcgccgccatgatcaaccccgaactcgagtatgtgaaactccagtccaaaaaggac
ggcctcgtctactacttcgccaaagacaacctcgaattccagcgcctcgccaaagagttc
aaggaaggcttcggccgccccgaatggcaatggcccaaaggcacccccaagctcaaaacc
ctctcgcagatcttcaaggaatccggcggctacgaagtgctggagaccgtcaagggcgaa
gccctcgtcggccgcaaatatcgcggcccatttgatgaactcgacgcgcagaactctgca
ggaggtgccccacgctcaagcgcctatacgtcatcgcgaggaaatctcgaagatcttctc
cttaatgacttttatggaccaacactgcaaaacgacgcttttgcagattcattgaaggcg
acgtacaatagtgaagttctaaaaatcaatgaggcactcgacaaatacaaaacagacgat
gccgacatttataatgtcatggtggacctatcgatagacaagaagaatgaacttgccgca
tcatttgtagcaataaggttcgcaatcatccgttcccaggttttgcatttactccgaaac
attcgagcaattcttaaaaagcacaaaaacctggggttcttctccgcagaacttaaccca
tcaatgacgctacgtgagatcaaggatttactagttcgcctcggttcgaccagttttcta
aaatctgaatgctggttaacactcgaagaagtatcattgttgatcgaagaatttgaaaat
cacgacgaaagggaagagttcgataatgagagaatgattcagcacgaggacttattgttt
gaaggcaatttattattttccgaaggcttgttctgtaacgattcaacgtcacttattgcg
agactacactcgacactagtgcttcaactggacacagaattgcagggattggcaaggcga
tctgctgttgaatgccatcgggtcatcgacggtggtcgcgacttcaaaggggcacctaac
gtcaaggaaggcgaagggacaggcattgtccatagtgcgccaggctgtggtgatgtcgat
catcagatcggcctcgccaacggtctccccacgatcgcaccgctcggcccagacggcaac
ttcctcgaaggcttcggccccttcaccggcaagaacgccgtccatcccgacaccgtgcaa
ctcgtcatcgacagcctcaaggagaaaggcctgctcgtcgccgaagagaagtacccgcac
atctatcccttctgctggcgtaccggcgatgaacttgtcttccgtctcgtcgatgaatgg
ttcatcaacatggactggcgcgacgaaatcatgggcgtcaccaggcagatcaactggctt
cccgacagcattcagggccaggaacgcgaagtcgaatggctcaccaacatgcgcgactgg
atgatctccaagaaacgctactggggcctcgccctccccatctgggtcgatgaacttacc
ggcgacttcgaagtcatcggctctctcgccgaacttaaagagcgcgccctcgatggtggc
gaaggctggaacgacttccagggccacacgccccacaaaccctggatcgacggcgtcaag
atccgcaatcctaaaacgggcaacctcatgacccgcgtggaagacgtcggcaacccctgg
ctcgacgccggcatcgtctccttctccaccatgggctacaacacccatcccgacatgtgg
aagaagtggtaccccgccgacctcgtcaccgaatgtttccccggccagttccgcaactgg
ttctactccctcctctccatggccaccatgatggatggcacgccgcccttcaaaaccctc
ctcggccaccgcctcgtcatgaacgagcaaggccaacccatgcacaaatccgatggcacg
gccatctggtttgaagaagccgccgaacagatcggtgtcgacgccatgcgctggatgtat
ctccagcagaaccccgcttccgacctgcgcttcggcacccgccatcccgatgaaaaggtc
actctcgaaacggtcaatggcccgaccaacaccaccatcgatggtgttcccacctgcaaa
gtcaccagcggccccgccgacgaagtccgccgccaggtcctcatcccgctgtggaactcc
tacgccttcttcgtcaactacgcccggctggacgagttcgacccgaatgcggcgatcgtc
ccggtggccgaacgccccgagatcgaccgctggctgctctcgaacctgcaagccctcatt
cagcaggtccgcgctggcttcgaagcgttcgacacacccgccgcctgtgcagccctcgcc
cgcttcattgatgatctctccaactggtatatccgccgcaatcgccgccgcttctggcgt
tccaaagataccggcgatctcgacaagcgtgcagcctatcagacactctacgaaactctc
ctcaccctcacgaaactgatggcaccgatgacgccgttcctcgccgaacggatgtacggc
aacctcacctcgggccagcccgacgcccccgaatcggtccatctttgcgactaccccact
gccgacgaatcgctgctggatacctcactcaacaggcggatgtcactggctcaaacggtc
gtacgcgtcgctcacaagctgcgggaagtcgccgatcaacgcgtgcgtcagcctttggcc
gaactccgtttcgccacactcagcagcgacgacctcacttcgatcagctcattgaaagac
gtcatcgccgacgaactcaacgtcaaagccgtcagcggctttgaatcattgggcgatatc
gtcaagtacacctacaaaccgaacctcaaaaccctcggcccgaaatacggcaagctcctc
aatgccttccgcgaagaacttcccaagctcccgggcaacctgctggaatcgctccgtcgt
ggccagacgatcaacgcgacggttggcggcgaagcagtcatcattggcccggacgatgtt
ctcatcggagccgatcaggccgaaggctgggtcgccggcgatgaatccggcatccaggtc
gccctctccacgaccctcactccagaacttgtcatggaagggatggcccgcgacttcatc
cgccacatccagcaggcccgaaaagacgccaacctggaaatccagcaacgcatcaccgtc
aactaccagaccagcgaaccgattgtggcagaaatgctcaaggagtggtccgacctgatc
tctagcgaaaccctcgccaacgagatcacccccgcgtcgggtctctctggaaaacccgta
caagtcggcgcagccgaggttatcataacaatcaaataa
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