Planctopirus limnophila: Plim_3532
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Entry
Plim_3532 CDS
T01225
Name
(GenBank) 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
plm
Planctopirus limnophila
Pathway
plm00010
Glycolysis / Gluconeogenesis
plm00020
Citrate cycle (TCA cycle)
plm00620
Pyruvate metabolism
plm00785
Lipoic acid metabolism
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
plm01120
Microbial metabolism in diverse environments
plm01200
Carbon metabolism
plm01210
2-Oxocarboxylic acid metabolism
Module
plm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Plim_3532
00020 Citrate cycle (TCA cycle)
Plim_3532
00620 Pyruvate metabolism
Plim_3532
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Plim_3532
Enzymes [BR:
plm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
Plim_3532
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Motif
Other DBs
NCBI-ProteinID:
ADG69345
UniProt:
D5SV59
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All DBs
Position
4560229..4562982
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AA seq
917 aa
AA seq
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MAGMMTDSSRSAASNGHAVSESQTELGELPAVGLDTDELAEWYESLDDVFHRYGPEEVRA
LLLELQQRASAKGVTGTASLTTPYINTIPVDAEPSYPGDRKIERKIRSIVRWNAMAMVVQ
AARSGTGVGGHISTFASSACLVETGFNHFFHAPSKSHTGDFVYFQGHASPGVYSRAFVEG
RLDESHLKNFRRELPRGQGLSSYPHPWLMPDFWQFPTVSMGLGPLCSLYQARFLRYLQHR
GLLDTSQSRVWCFIGDGEVDEPETLGAITLGAREHLDNVTWVINCNLQRLDGPVRGNGKI
IQELEGLFRGAGWNVLKVIWGADWDPILANDESGQLKKRMLEIVDGQFQKYVVESGSYIR
QDFFGKNPELLKLVEHLSDDQIKDLRRGGHDAQKVYTAYHAAVNHKGVPTVILAHTIKGY
GLGESAEGKNTTHQQKKLEEDDLLKFRTRFELPLSDEEAKAAKFYKPDPSSPEVKYMLER
RKELGGFLPVRKPTSERLTIPSFDQFQTALKGSVGKEWSTTMVLGRIMGWLCTDKNVGKR
IVPIIPDEAQTFGMHTLFAQVGIYSSKGQQYTPVDAGQMVWYREETNGQILMEGINEAGA
MSSFVAAGTAYANLGLNMIPFYVYYSMFGFQRVGDLIWLAGDSRAKGFLCGGTSGRISLN
GEGLQHQDGHSQLIASSVPNLLAYDPAFGYEVAAIVQDGMRRMYAEDENVFYYLSVYNDG
TFPMPAIPAGVTQEMICAGLYPLEPSVTAKKRTHRPQLLGSGPIMQYVLKAKQILSEKYG
VEADVWSVTSYNELKRNAQAVARWNALHPDKKPKQSHIDQVTAGVTGPFISASENVQLVA
EQIRQYLPGRYTVLGCDGFGRSEAREVLRRHFEVDAECIVFAALSALAKDGHFDAKRLPK
VLQELGIDPEKVDPATA
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtatgatgacagattcgagccgttccgcagcttctaacggacatgctgtttcc
gagtctcaaacagagttaggcgaactccctgcggtagggctggataccgatgaactggcc
gagtggtacgaatcactcgatgatgtcttccatcgttatgggccagaagaagttcgcgct
ctgctgctcgaattgcagcagcgggcttcggccaaaggtgtcacgggtactgccagtctg
acgactccttatattaatacgattcccgtcgatgctgagccgagctatccgggtgaccgc
aagatcgaacgcaagattcgctcgattgtccgctggaatgcgatggccatggtcgtacag
gctgcgcgcagtggcaccggtgttggtggtcacatttcgacatttgcctcttcggcgtgc
ctggtagaaaccgggttcaaccatttctttcatgctccttcaaagtcgcacactggcgac
tttgtttattttcaagggcatgcttcgccgggcgtttattcacgagccttcgtggaaggc
cgtctcgacgaaagccatctgaaaaacttccgtcgcgagttaccgcgtggccagggtctt
tcatcctatccgcatccgtggctgatgcctgacttctggcaattccccacggtttcgatg
ggtctggggccactttgctcgctctatcaggcccggttccttcgttatctgcagcatcgc
ggcctgctcgataccagccagtcgcgcgtctggtgctttattggcgatggggaagtcgat
gagcccgaaactctgggtgctatcactctgggggctcgcgaacatctcgacaacgtcacc
tgggtcatcaactgcaacctgcagcggctcgatggtcccgtccgcgggaatggcaagatc
attcaggagctcgaaggcctcttccggggtgccgggtggaatgttctcaaggtcatctgg
ggtgccgactgggatccgattctcgctaatgatgaatcgggccagctcaaaaagcggatg
ctcgaaatcgtcgatggtcagttccagaagtacgttgtcgaatcaggcagctacatccgg
caggatttcttcggtaagaaccccgaactcctcaagctcgtggagcatctgagcgacgac
cagattaaagatctccgtcgtggtggtcacgatgcccagaaggtctataccgcttaccat
gcggctgtgaatcacaagggtgtccccacagtcattcttgcccataccattaagggctac
ggcctgggtgaatctgccgaaggcaagaacaccacacaccagcagaagaaactcgaagaa
gacgatctgctcaagttccgcacccgctttgaactgccactttcggacgaagaggccaaa
gccgccaagttctacaagccagatccttcgagccccgaagtcaaatacatgctcgaacgg
cgaaaagaactggggggtttcctccccgttcgcaagccgacgagcgagcggctcaccatt
ccctcgtttgaccagttccagactgcactcaaagggagtgtgggcaaagaatggtccacg
accatggttctcggcaggattatgggctggctttgcaccgacaagaatgtcggcaaacgc
attgtccccatcatccccgatgaagcccagacgttcgggatgcacaccctctttgctcag
gtggggatctacagcagcaaaggccagcagtacacaccggttgatgccggtcagatggtc
tggtatcgcgaagaaaccaacggccagattctcatggaagggatcaacgaagccggtgcc
atgtcgtcattcgtggctgcgggaacggcttatgccaacctcggcctgaacatgatcccc
ttctacgtctactactcgatgttcggtttccagcgagttggcgatctcatctggctggcc
ggcgattcccgcgccaagggcttcctgtgcggtggaacctcgggccgcatttcgctcaac
ggcgaaggtctgcagcatcaggatggacactcacagctcattgcatcgagtgtaccgaac
ctcctggcttacgatccggcctttggctatgaagtggcggccatcgttcaggatgggatg
cgccgcatgtatgccgaagacgagaacgttttctattatctctcggtctacaacgatggc
accttccccatgcccgcgatccctgctggcgtgacacaggaaatgatttgtgccggtctg
tatcccttagagccgagcgtcactgccaagaagcggacgcaccggccgcagctgctgggg
agcgggccgatcatgcagtacgttctcaaagccaagcagatcctttcggaaaagtacggc
gtcgaagcggatgtctggagtgtgaccagctacaacgaactgaagcgcaatgctcaggca
gtcgcacgctggaacgctctccatcccgacaagaaacccaagcagagccatattgatcag
gtgacggctggagtcacggggcccttcatctcggccagtgaaaacgttcaactcgtggct
gagcagattcggcagtatctccctgggcgctacactgttctgggttgtgacggcttcggt
cggagtgaagctcgcgaagtgctgcgtcgccatttcgaagtcgatgccgagtgcattgtc
ttcgcggctctgtcggctctggccaaagacgggcactttgatgccaagcgattgcccaag
gtgctgcaggaactcggtatcgatcctgaaaaggtcgatcccgccacggcataa
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