Polystyrenella longa: Pla110_07610
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Entry
Pla110_07610 CDS
T06945
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
plon
Polystyrenella longa
Pathway
plon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pla110_07610 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plon03400
]
Pla110_07610 (pdg)
Enzymes [BR:
plon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pla110_07610 (pdg)
DNA repair and recombination proteins [BR:
plon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pla110_07610 (pdg)
Prokaryotic type
Pla110_07610 (pdg)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDU79057
UniProt:
A0A518CIP1
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All DBs
Position
966130..966807
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AA seq
225 aa
AA seq
DB search
MSVDPDQELIPDRKKRVRRIITQLKKRYPEAECALFHDGPFQLLVATILSAQCTDERVNM
VTPILFAKYPTAEKLAVATQKDVEEIVHSLGFFRAKAANLRGMAQAVVAEHDGEIPQDLA
ALVALPGVGRKTANVVLGTAFGIPSGVVVDTHVKRICNLLGLTRSKNPEIIERELQEIVP
RKEWIEWSHRLIHHGRQICIARRPQCPECPLLKNCPRVGLGPLNK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgatcccgatcaggagttaattcccgaccgcaaaaagcgagtgcggcggatt
atcactcagcttaaaaagcgataccccgaggctgagtgcgccctgtttcacgacgggcca
ttccaattattggtcgcaacgattctctcggctcaatgcacagacgaacgcgtcaacatg
gtgacgccgatcttgtttgcgaagtatcccaccgccgaaaaactggcggtcgcaacccag
aaagatgtcgaggaaattgtacattcgctcggcttctttcgagccaaagccgccaacctg
cgaggcatggcgcaagccgtcgttgccgaacacgacggagaaattccccaggatctggcc
gcccttgtcgcgctaccgggcgtcggtcgcaaaacagcaaatgtagttctgggaaccgca
ttcgggattccgagtggcgtcgtcgtggatacacatgtgaaacggatctgcaatctgctc
ggcctcacccgtagcaagaaccccgagatcatcgaacgggaactgcaggagatcgttccc
cggaaggaatggatcgaatggtcgcaccgtctcattcatcatggtcgccaaatctgcatc
gcccgcagaccacaatgtccggaatgccccctgttgaaaaactgtcctcgagtgggactt
ggaccgttgaataagtag
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