Perognathus longimembris pacificus (Pacific pocket mouse): 125338866
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Entry
125338866 CDS
T08928
Symbol
Actb
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03082
ATP-dependent chromatin remodeling
plop04015
Rap1 signaling pathway
plop04145
Phagosome
plop04210
Apoptosis
plop04390
Hippo signaling pathway
plop04510
Focal adhesion
plop04520
Adherens junction
plop04530
Tight junction
plop04611
Platelet activation
plop04613
Neutrophil extracellular trap formation
plop04670
Leukocyte transendothelial migration
plop04714
Thermogenesis
plop04810
Regulation of actin cytoskeleton
plop04814
Motor proteins
plop04820
Cytoskeleton in muscle cells
plop04919
Thyroid hormone signaling pathway
plop04921
Oxytocin signaling pathway
plop04971
Gastric acid secretion
plop05014
Amyotrophic lateral sclerosis
plop05100
Bacterial invasion of epithelial cells
plop05132
Salmonella infection
plop05135
Yersinia infection
plop05164
Influenza A
plop05205
Proteoglycans in cancer
plop05225
Hepatocellular carcinoma
plop05410
Hypertrophic cardiomyopathy
plop05412
Arrhythmogenic right ventricular cardiomyopathy
plop05414
Dilated cardiomyopathy
plop05416
Viral myocarditis
plop05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125338866 (Actb)
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
125338866 (Actb)
04390 Hippo signaling pathway
125338866 (Actb)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125338866 (Actb)
09143 Cell growth and death
04210 Apoptosis
125338866 (Actb)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125338866 (Actb)
04520 Adherens junction
125338866 (Actb)
04530 Tight junction
125338866 (Actb)
09142 Cell motility
04814 Motor proteins
125338866 (Actb)
04820 Cytoskeleton in muscle cells
125338866 (Actb)
04810 Regulation of actin cytoskeleton
125338866 (Actb)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
125338866 (Actb)
04613 Neutrophil extracellular trap formation
125338866 (Actb)
04670 Leukocyte transendothelial migration
125338866 (Actb)
09152 Endocrine system
04921 Oxytocin signaling pathway
125338866 (Actb)
04919 Thyroid hormone signaling pathway
125338866 (Actb)
09154 Digestive system
04971 Gastric acid secretion
125338866 (Actb)
09159 Environmental adaptation
04714 Thermogenesis
125338866 (Actb)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
125338866 (Actb)
09162 Cancer: specific types
05225 Hepatocellular carcinoma
125338866 (Actb)
09172 Infectious disease: viral
05164 Influenza A
125338866 (Actb)
09171 Infectious disease: bacterial
05132 Salmonella infection
125338866 (Actb)
05135 Yersinia infection
125338866 (Actb)
05100 Bacterial invasion of epithelial cells
125338866 (Actb)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125338866 (Actb)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
125338866 (Actb)
05410 Hypertrophic cardiomyopathy
125338866 (Actb)
05412 Arrhythmogenic right ventricular cardiomyopathy
125338866 (Actb)
05414 Dilated cardiomyopathy
125338866 (Actb)
05416 Viral myocarditis
125338866 (Actb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125338866 (Actb)
03019 Messenger RNA biogenesis [BR:
plop03019
]
125338866 (Actb)
03036 Chromosome and associated proteins [BR:
plop03036
]
125338866 (Actb)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125338866 (Actb)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125338866 (Actb)
04147 Exosome [BR:
plop04147
]
125338866 (Actb)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125338866 (Actb)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125338866 (Actb)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125338866 (Actb)
NuA4 complex
125338866 (Actb)
Chromatin remodeling factors
BAF complex
125338866 (Actb)
PBAF complex
125338866 (Actb)
GBAF(ncBAF) complex
125338866 (Actb)
SWR1 complex
125338866 (Actb)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
125338866 (Actb)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125338866 (Actb)
Exosome [BR:
plop04147
]
Exosomal proteins
Proteins found in most exosomes
125338866 (Actb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
125338866
NCBI-ProteinID:
XP_048185883
LinkDB
All DBs
Position
1:76225238..76228787
Genome browser
AA seq
375 aa
AA seq
DB search
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgatattgctgcgctcgttgtggacaatggctccggcatgtgcaaagccggc
ttcgcgggcgacgatgccccccgggcggtctttccctccatcgtaggacgcccaaggcac
cagggtgtgatggtgggcatgggtcagaaggattcctacgtgggcgacgaagcccagagc
aagagaggcatcctgaccctgaagtaccccatcgagcacggcattgtcaccaactgggac
gacatggagaagatctggcaccatactttctacaacgagctgcgtgtggcccccgaggag
caccccgtgttgctgaccgaggcccccctgaaccccaaggccaatcgtgagaagatgacc
cagatcatgttcgagaccttcaacaccccagccatgtacgtggccatccaggctgtgctg
tccctgtatgcctctggccgtaccactggcattgtcatggactccggtgatggggtcacc
cacacagtgcccatctacgaggggtatgccctcccccatgccatcctgcgtctggacctg
gctggccgggacctgacagactacctcatgaagatcctgaccgagagaggctacagtttc
accaccacagccgagcgggaaatcgtgcgtgacatcaaggagaagctgtgctatgttgcc
ctggatttcgagcaggagatggccaccgctgcctcctcctcctccctggagaagagctat
gagctgcctgatgggcaggtgatcaccattggcaacgagcgcttccgttgccctgaggct
cttttccagccctccttcctgggcatggaatcctgtggcatccacgaaactaccttcaac
tccatcatgaagtgtgatgtggacatccgcaaggatctgtatgccaacacagtgctctct
ggtggcaccaccatgtaccctggcatcgcagacaggatgcagaaggagatcacagccctg
gcacccagcacgatgaagatcaagatcattgctccccctgagcgcaagtactctgtgtgg
atcggtggctccatcctggcctccctgtccaccttccagcagatgtggattagcaagcag
gaatacgatgagtccggcccctccatcgtgcaccgcaagtgcttctag
DBGET
integrated database retrieval system