KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125339041
Entry
125339041         CDS       T08928                                 
Name
(RefSeq) actin, cytoplasmic 1-like
  KO
K05692  actin beta/gamma 1
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03082  ATP-dependent chromatin remodeling
plop04015  Rap1 signaling pathway
plop04145  Phagosome
plop04210  Apoptosis
plop04390  Hippo signaling pathway
plop04510  Focal adhesion
plop04520  Adherens junction
plop04530  Tight junction
plop04611  Platelet activation
plop04613  Neutrophil extracellular trap formation
plop04670  Leukocyte transendothelial migration
plop04714  Thermogenesis
plop04810  Regulation of actin cytoskeleton
plop04814  Motor proteins
plop04820  Cytoskeleton in muscle cells
plop04919  Thyroid hormone signaling pathway
plop04921  Oxytocin signaling pathway
plop04971  Gastric acid secretion
plop05014  Amyotrophic lateral sclerosis
plop05100  Bacterial invasion of epithelial cells
plop05132  Salmonella infection
plop05135  Yersinia infection
plop05164  Influenza A
plop05205  Proteoglycans in cancer
plop05225  Hepatocellular carcinoma
plop05410  Hypertrophic cardiomyopathy
plop05412  Arrhythmogenic right ventricular cardiomyopathy
plop05414  Dilated cardiomyopathy
plop05416  Viral myocarditis
plop05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125339041
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    125339041
   04390 Hippo signaling pathway
    125339041
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125339041
  09143 Cell growth and death
   04210 Apoptosis
    125339041
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125339041
   04520 Adherens junction
    125339041
   04530 Tight junction
    125339041
  09142 Cell motility
   04814 Motor proteins
    125339041
   04820 Cytoskeleton in muscle cells
    125339041
   04810 Regulation of actin cytoskeleton
    125339041
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    125339041
   04613 Neutrophil extracellular trap formation
    125339041
   04670 Leukocyte transendothelial migration
    125339041
  09152 Endocrine system
   04921 Oxytocin signaling pathway
    125339041
   04919 Thyroid hormone signaling pathway
    125339041
  09154 Digestive system
   04971 Gastric acid secretion
    125339041
  09159 Environmental adaptation
   04714 Thermogenesis
    125339041
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    125339041
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    125339041
  09172 Infectious disease: viral
   05164 Influenza A
    125339041
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125339041
   05135 Yersinia infection
    125339041
   05100 Bacterial invasion of epithelial cells
    125339041
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    125339041
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    125339041
   05410 Hypertrophic cardiomyopathy
    125339041
   05412 Arrhythmogenic right ventricular cardiomyopathy
    125339041
   05414 Dilated cardiomyopathy
    125339041
   05416 Viral myocarditis
    125339041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plop03021]
    125339041
   03019 Messenger RNA biogenesis [BR:plop03019]
    125339041
   03036 Chromosome and associated proteins [BR:plop03036]
    125339041
   03029 Mitochondrial biogenesis [BR:plop03029]
    125339041
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:plop04812]
    125339041
   04147 Exosome [BR:plop04147]
    125339041
Transcription machinery [BR:plop03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125339041
Messenger RNA biogenesis [BR:plop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125339041
Chromosome and associated proteins [BR:plop03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125339041
    NuA4 complex
     125339041
  Chromatin remodeling factors
   BAF complex
    125339041
   PBAF complex
    125339041
   GBAF(ncBAF) complex
    125339041
   SWR1 complex
    125339041
Mitochondrial biogenesis [BR:plop03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125339041
Cytoskeleton proteins [BR:plop04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125339041
Exosome [BR:plop04147]
 Exosomal proteins
  Proteins found in most exosomes
   125339041
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 125339041
NCBI-ProteinID: XP_048186073
LinkDB
Position
20:29625709..29627335
AA seq 375 aa
MDDDIAVLVVDNGSGMCKAGFAGDNAPRAVFPSIVGCPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIQHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGHTTGSVMDSGDGVTHTVPIYEGYALPHATLRLDL
AGWHLTDYLKKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTMLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHHKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggacgatgacattgctgtgctcgttgtggacaatggctccggcatgtgcaaagccggc
ttcgccggtgacaatgccccccgggcggtctttccctccatcgtaggatgcccaaggcac
cagggcgtgatggtgggcatgggtcagaaggattcctacgtgggtgatgaagcccagagc
aagagaggcatcctgaccctgaagtaccccatccagcatggcattgtcaccaactgggac
gatatggagaagatctggcaccatactttctacaacgagctgcgtgtggcccccgaggag
caccccgtgttgctgaccgaggcccccctgaaccccaaggccaatcgtgagaagatgacc
cagatcatgttcgagaccttcaacaccccagccatgtacgtggccatccaggctgtgctg
tccctgtatgcctctggccataccactggcagtgtcatggactccggtgatggggtcacc
cacacagtgcccatctacgaggggtatgccctcccccatgccaccctgcgtctggacctg
gctggctggcacctgacagactacctcaagaagatcctgaccgagagaggctacagtttt
accaccacagccgagcgggaaatagtgcgtgacatcaaggagaagctgtgctatgttgct
ctggatttcgagcaggagatggccactgctgcctcctcctcctccctggagaagagctat
gagcttcctgatgggcaggtgatcaccattggcaacgagcgcttccgttgccctgaggct
cttttccagccctccttcctgggcatggaatcctgtggcatccacgaaactaccttcaac
tccatcatgaagtgtgatgtggacatccgcaaggatctgtatgccaacacaatgctctct
ggtggcaccaccatgtaccctggcatcgcagacaggatgcagaaggagatcacagccctg
gcacccagcacgatgaagatcaagatcattgctcctcctgagcgcaagtactccgtgtgg
attggtggctccatcctggcctccctgtccaccttccagcagatgtggattagcaagcag
gaatacgatgagtccggcccctccatcgtgcaccacaagtgcttctag

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