KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125339985
Entry
125339985         CDS       T08928                                 
Symbol
Pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop01521  EGFR tyrosine kinase inhibitor resistance
plop04010  MAPK signaling pathway
plop04014  Ras signaling pathway
plop04015  Rap1 signaling pathway
plop04020  Calcium signaling pathway
plop04072  Phospholipase D signaling pathway
plop04151  PI3K-Akt signaling pathway
plop04510  Focal adhesion
plop04540  Gap junction
plop04630  JAK-STAT signaling pathway
plop04810  Regulation of actin cytoskeleton
plop05165  Human papillomavirus infection
plop05200  Pathways in cancer
plop05206  MicroRNAs in cancer
plop05214  Glioma
plop05215  Prostate cancer
plop05218  Melanoma
plop05230  Central carbon metabolism in cancer
plop05231  Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    125339985 (Pdgfrb)
   04014 Ras signaling pathway
    125339985 (Pdgfrb)
   04015 Rap1 signaling pathway
    125339985 (Pdgfrb)
   04630 JAK-STAT signaling pathway
    125339985 (Pdgfrb)
   04020 Calcium signaling pathway
    125339985 (Pdgfrb)
   04072 Phospholipase D signaling pathway
    125339985 (Pdgfrb)
   04151 PI3K-Akt signaling pathway
    125339985 (Pdgfrb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125339985 (Pdgfrb)
   04540 Gap junction
    125339985 (Pdgfrb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    125339985 (Pdgfrb)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125339985 (Pdgfrb)
   05206 MicroRNAs in cancer
    125339985 (Pdgfrb)
   05230 Central carbon metabolism in cancer
    125339985 (Pdgfrb)
   05231 Choline metabolism in cancer
    125339985 (Pdgfrb)
  09162 Cancer: specific types
   05214 Glioma
    125339985 (Pdgfrb)
   05218 Melanoma
    125339985 (Pdgfrb)
   05215 Prostate cancer
    125339985 (Pdgfrb)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    125339985 (Pdgfrb)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    125339985 (Pdgfrb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:plop01001]
    125339985 (Pdgfrb)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:plop04090]
    125339985 (Pdgfrb)
Enzymes [BR:plop01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     125339985 (Pdgfrb)
Protein kinases [BR:plop01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   125339985 (Pdgfrb)
CD molecules [BR:plop04090]
 Proteins
  125339985 (Pdgfrb)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_3 ig I-set Ig_2 V-set VEGFR-1-like_Ig-like Haspin_kinase
Other DBs
NCBI-GeneID: 125339985
NCBI-ProteinID: XP_048187298
LinkDB
Position
22:1181468..1202673
AA seq 1101 aa
MGTVRPPGAMPARWLPGRLLWLPLLWLLGPRSSRGLVTAPPGPELVVNASSTVVLRCWGS
APVVWERLAGVPPQRLSRTRDGAFSSTLTLANATGLDTGEYFCAYNGSAGPESGDRRRLY
VFVPDPAVVFLPQNSDDLFIFLMEVAETTIPCRVTDPHLEVTLHEKKVDTPLPVPYDHQR
GFSGIFEDKTYICKTTVEDREVESDAYYIYSLQVSSINVSVSAVQTVVRQGENITILCIV
TGTEVVNFEWTYPRLESGRKIEPVTDFLLDLPFHIRSILHVPSAELGDSGLYTCNVSESV
TEHGDEKAVNVTVLEVGYVRLREEVNPVEVAELHQSRTLQVMFEAYPPPSVLWLKDNHTL
GDSSAGEIILSTRNVSETWYVSELTLVRVKVEEAGYYTMVVFHEDAEAQLSFRLQVNVPV
RMLELSESHPANGEQRVRCRGRGMPQPNVTWSICRDFKRCPRELPPAPLGNGSEGESQLE
TNVSYLAEEKEYEVVSTLRLRHVAQPLSVRCVLQNPLGRDAQEVTVVPHPLPFKVVVISA
ILALVVLTVISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPR
DRLVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSSARSSEKQALMSELKIMSH
LGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKYTFLQHHADKPRPAGPELYS
GALPTAPPLPSPVSLSGESDGGYMDMSRDESVDYVPMLAMKGDVRYADIEASDYMASYDN
YRPSAPERATLINESPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLV
KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGVLLWEIFTLG
GTPYPELPMNEQFYNAIKRGYRMAQPPHAPDEIYEIMQKCWEEKFEIRPPFSQLVLLLER
LLGEGYKKKYQQVDEEFLRSDHPAILRSQARFPGFQGLRPPLDTSSVLYTAVQPNGADND
YIIPLPDPKPELARQRPVEGSPSLASSTLNEANTASTISCDGPLDPQEEPGPPAAEPPPD
PPRRPDSRGPPPPADVEDSFL
NT seq 3306 nt   +upstreamnt  +downstreamnt
atgggcaccgtgcggcctccaggcgccatgccggctcggtggctcccgggccggctgctg
tggctgcccctgctgtggctgctggggccgcggagctcccggggcctggtcacggcgccc
ccgggcccggagctggtggtcaacgcctcgagcaccgtggtcctgcggtgctggggctcc
gcgccggtggtgtgggagcgcctggccggggtgcccccccagcggctctcccggacgcgg
gacggcgccttctccagcacgctcaccctggccaacgccacgggcctggacaccggggag
tacttctgcgcctacaacggctccgcggggccggagtcgggggaccggaggcgcctctac
gtgttcgtgccagatcccgccgtggtcttcctgcctcagaactcggacgacctgttcatc
tttctcatggaagtcgccgagactaccatcccctgccgggtgacagatccgcacctggag
gtgacactgcacgagaagaaggtggacacgcccctgcctgtcccttacgaccaccagcga
ggcttctctggcatctttgaggacaagacctacatctgtaaaaccaccgtcgaggacagg
gaagtggagtcggatgcctactacatctacagcctgcaggtgtcgtccatcaacgtctcg
gtgagcgcggtgcagacggtggtccgtcagggcgagaacatcaccatcctgtgcatcgtg
accgggacggaggtggtcaacttcgagtggacataccctcgcctggagagcgggcggaag
atagagccggtgacggacttcctcctggacctgcccttccacatccgctccatcctgcac
gtccccagcgcggaactgggggactcggggctctacacctgcaacgtgtcggagagcgtc
acggagcacggggacgagaaggcggtcaacgtcaccgtgctcgaggtcggctacgtgagg
ctgcgggaggaggtgaaccccgtggaggtggccgagctgcaccagagccgaacactgcag
gtgatgttcgaagcctatccgccaccctctgtcctgtggctcaaggacaaccacaccctg
ggcgactccagcgccggcgagatcatcctgtccactcgcaacgtgtcggagacctggtac
gtgtcggaactgacgctcgtgcgcgtgaaggtggaagaggccggctactacaccatggtg
gtcttccacgaggacgctgaggcccagctctccttcaggctgcaggtcaatgtccccgtc
cgcatgctggagttgagcgagagccacccggccaacggggaacagcgagtccgctgtcga
ggccgcggcatgccccagcccaatgtcacctggtccatctgcagggacttcaaaaggtgc
ccccgtgagctgccccccgcccccctggggaacggctccgagggggagagccagctggag
accaacgtgagctacctggcggaggagaaggagtacgaggtggtgagcaccctgcgcctg
cgccacgtggcgcagcccctgtcggtgcgctgcgtgctgcagaacccgctgggccgggac
gcgcaggaggtcaccgtggtgccgcaccccctgcccttcaaggtggtggtcatctcagcc
atcctggccctggtggtcctgaccgtcatctccctcatcatcctcatcatgctgtggcag
aagaagccgcgctacgagatccggtggaaggtgatcgagtccgtcagctccgacggtcac
gagtacatctacgtggaccccatgcagctgccctacgactccacgtgggagctcccgagg
gaccggctggtgctgggtcggacgctcggctccggggccttcgggcaggtggtggaggcc
acggctcacggcctgagccactcgcaggccaccatgaaggtggctgtcaagatgctcaaa
tcctcggcccgcagcagtgagaagcaagccctcatgtctgagctgaagatcatgagtcac
ctcgggccccacctgaacgtggtcaacctgctgggggcctgcaccaaaggaggacccatc
tacatcatcacggagtactgccgctacggcgacctggtggactacctgcaccgcaacaag
tacaccttcctgcagcaccacgccgacaagccccgcccggccggccccgagctctacagc
ggcgccctgcccacggcgccccccctgcccagccctgtgtccctgagcggggagagcgat
ggcggctacatggacatgagcagggatgagtccgtggactatgtgcccatgctggccatg
aaaggagacgtcagatacgcggacatcgaggcctctgactacatggcttcttacgacaac
taccgcccctcggcccccgagagagcgaccctgatcaacgagtcccccgtgctgagctac
acggacctggtgggcttcagctaccaggtggccaacggcatggagttcctggcctccaag
aactgtgtccaccgcgacctggcggccaggaacgtgctcatctgcgagggcaagctcgtc
aagatctgcgacttcggcctggctcgagacatcatgagggactcgaactacatctccaag
ggcagcaccttcctgcctctcaagtggatggcgcccgagagcatcttcaacagcctgtac
accacgctgagcgacgtgtggtccttcggggtcctcctgtgggagatcttcacgctgggc
ggcacgccctacccggagctgcccatgaacgagcaattctacaacgccatcaagaggggc
taccgcatggcgcagcccccgcatgcccccgacgaaatctacgagatcatgcagaagtgc
tgggaagagaagtttgagatccggccccccttctcccagctcgtgctgcttctcgagaga
cttctgggagagggttacaaaaagaagtaccagcaggtggatgaggagtttctgaggagc
gaccacccggccatcctccgctcccaagcccgcttcccgggcttccagggcctccggccg
ccgctggacaccagctctgtgctctacaccgccgtgcagcccaacggggccgacaacgac
tacatcatccccctccccgaccccaagcccgagctcgcccgccagcgcccggtggagggc
tcccccagcctggccagctccacgctgaacgaggccaacaccgcctccaccatctcctgc
gacggccccctggacccgcaggaggagccggggcccccggccgccgagcccccgcccgac
cctccgcggcgccccgactcccgcggccccccgccgccggccgacgtcgaggacagcttc
ctgtag

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