Perognathus longimembris pacificus (Pacific pocket mouse): 125340706
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Entry
125340706 CDS
T08928
Symbol
Nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125340706 (Nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125340706 (Nthl1)
Enzymes [BR:
plop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
125340706 (Nthl1)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125340706 (Nthl1)
Prokaryotic type
125340706 (Nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF2400
HHH_5
Motif
Other DBs
NCBI-GeneID:
125340706
NCBI-ProteinID:
XP_048188449
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All DBs
Position
23:16386191..16392539
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AA seq
313 aa
AA seq
DB search
MRVVTRSRSRVLAAASRGSGEGLAPLTSGAAATEGRKSHKPVKRPWKRLCVAYEASNGEE
GAEAEPLQVPVWEPQDWQQQLSNIRAMRSKKDAPVDQLGAEHCYDTSVPPEVQRYQVLLS
LMLSSQTKDQVTAGAMKRLRARGLTVDSILQTDDSTLGQLIYPVGFWRGLLFPDQVMNLT
TIFQSKVKFIKQTSAILQQRYGGDIPASVPELVALPGVGPKMAHLAMAVAWGTVSGIAVD
THVHRIANRLGWTKRTTKSPEKTREALEEWLPRELWGEINGLLVGFGQQTCLPVHPRCQT
CLNRALCPAAQSL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtggtgactcgcagccgcagccgcgttttggcggctgcgtctcgcgggagtggg
gaaggcctcgcccctctcacgagcggagcggcggcgacagaaggaagaaaaagccacaag
cctgtgaagcgtccatggaagagactttgtgtggcttatgaggcttcaaatggtgaggaa
ggggcagaagctgagcccctccaggtgcctgtctgggagcctcaagactggcagcagcag
ctgagtaacatccgtgctatgaggagcaagaaggatgcacctgtggaccagctgggcgct
gagcactgctatgataccagtgtccctccagaagtgcagaggtaccaggtgctcttgtca
ctgatgctctccagccagaccaaagaccaggtgacagcgggtgccatgaagcggctccgg
gcccggggcctgacggtggacagcatcctgcagacagacgacagcacactgggccagctc
atctaccccgtgggcttctggaggggcctcctctttccagatcaggttatgaacctcacc
accatctttcagagcaaggtcaagttcatcaagcagaccagtgccatcctgcagcagcgc
tatggaggggacatcccagcctccgtgccagagctggtggccctgcccggtgttgggccc
aaaatggcacacttggctatggctgtggcctggggcactgtatcgggcatagcggtggac
actcacgtgcacaggattgctaaccggttaggatggactaagaggacaaccaagtctcca
gagaagacgcgggaagccctggaggagtggctgcccagggagctgtggggcgagatcaat
gggctgttggtaggctttggccaacaaacctgcctgcctgtccaccctcgctgccagacc
tgcctcaaccgggccctgtgtccagctgcccagagcctctga
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integrated database retrieval system
