Perognathus longimembris pacificus (Pacific pocket mouse): 125342944
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Entry
125342944 CDS
T08928
Symbol
Dntt
Name
(RefSeq) DNA nucleotidylexotransferase isoform X1
KO
K00977
DNA nucleotidylexotransferase [EC:
2.7.7.31
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03450
Non-homologous end-joining
plop04640
Hematopoietic cell lineage
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125342944 (Dntt)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
125342944 (Dntt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125342944 (Dntt)
Enzymes [BR:
plop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.31 DNA nucleotidylexotransferase
125342944 (Dntt)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
125342944 (Dntt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_lambd_f
BRCT
DNA_pol_B_palm
NTP_transf_2
HHH_8
Motif
Other DBs
NCBI-GeneID:
125342944
NCBI-ProteinID:
XP_048191249
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All DBs
Position
2:complement(25788683..25809069)
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AA seq
510 aa
AA seq
DB search
MDPLPTAHSGPRKKRPRQMGALTTSTPQDIKFRDLVLFILEKKMGTSRRAFLMELARSKG
FRVENELSDSVTHIVAENNSGSDVLEWLQVQNIKASSQLEFLDISWLTECMGAGKPVQMT
GKHQLVVRRDYPPSPNPGLQKTPPPTVQKISQYACQRRTTLNNWNPLFTDALDILAENSE
FRENEACCLAFMRASSVLKSLPFTISSMKDTAGIPWLGDKVKYIMEGIIEDGESSEVKAV
LNDERYQAFKLFTSVFGVGLKTSEKWFQKGFRTLGEVQSDKSLKFTRMQKAGFLYYEDLI
SSVTRAEAEAVSVLVKEAVWTFLPNALVTLTGGFRRGKKIGHDVDFLITSPEVTEEKEQQ
LLHKVTNLWEKKGLLLFCDHVESTFEKLKLPSRKVDALDHFQKCFLILKLDHQRVDSDQS
SQQEGKTWKAIRVDLVICPYERRAFALLGWSGSRQFERDLRRYATHERKMMLDNHALYDK
TKKLFLKAESEEEIFAHLGLDYIEPWERNA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggatccactgccaaccgcccactcaggccctcgtaaaaagagacctaggcagatgggc
gccttgacaacctccacacctcaagacatcaaatttcgagacttggtcctcttcatcttg
gagaagaaaatgggaaccagccgcagagccttcctcatggagctagcccgcagtaaaggg
ttcagggtggaaaatgagctcagtgattctgtcacccacattgtagcagaaaacaactca
ggctcagacgttctggagtggcttcaggtacagaacatcaaagccagctcccagctggaa
ttccttgatatctcctggctcacggagtgcatgggggcagggaaaccagtgcagatgaca
ggaaagcaccagcttgttgtgagaagagactatccccctagccccaacccaggcctccaa
aagactccaccgccaactgtacaaaagatctctcagtatgcttgtcagagaagaaccact
ttaaacaactggaaccccctgttcacggatgccctcgacatactggctgaaaattctgag
tttagagagaatgaagcctgttgtctggcatttatgagggcgtcctctgtcctgaaatct
ctgccattcaccattagcagcatgaaggacacagcgggaattccctggctgggggacaag
gtgaaatatatcatggagggaattattgaagatggagaaagttccgaagttaaagctgtg
ttaaatgatgaacgatatcaagccttcaaattgtttacctctgtgtttggagtgggactg
aagacatctgagaaatggttccagaagggcttcagaaccctgggtgaagttcaatcagac
aaaagcctgaaattcacacgaatgcagaaagcagggtttctctattacgaagacctcatc
agcagtgtgaccagggcggaggcagaggcggtcagtgtgctggttaaagaggctgtctgg
acatttcttcccaatgccttggtcacattgacaggaggcttccgaagaggtaagaagatt
gggcatgatgtggattttttaattactagcccagaagtaacagaagaaaaagaacagcaa
cttctgcataaagtgacaaacttgtgggaaaaaaagggattacttttattctgtgaccat
gtggagtcgacattcgaaaagctcaagttgcccagcaggaaggtggatgctttagatcat
tttcaaaaatgctttctcattttgaaactcgaccatcagagagtggacagtgaccagtcc
agccagcaggaaggaaagacctggaaagccatccgggtggacttggtcatatgcccctac
gagcgccgtgccttcgccctgctgggatggtcagggtcccggcagtttgagagagatctc
cggcgctatgccacacatgagcggaaaatgatgctggacaaccatgctttatatgacaag
accaagaagctatttctcaaagccgagagtgaagaagaaatttttgcacatctgggattg
gattacattgaaccatgggaaagaaatgcttag
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