KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125343374
Entry
125343374         CDS       T08928                                 
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
  KO
K04725  E3 ubiquitin-protein ligase XIAP [EC:2.3.2.27]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop01524  Platinum drug resistance
plop04064  NF-kappa B signaling pathway
plop04120  Ubiquitin mediated proteolysis
plop04210  Apoptosis
plop04215  Apoptosis - multiple species
plop04217  Necroptosis
plop04510  Focal adhesion
plop04621  NOD-like receptor signaling pathway
plop04668  TNF signaling pathway
plop05145  Toxoplasmosis
plop05166  Human T-cell leukemia virus 1 infection
plop05200  Pathways in cancer
plop05207  Chemical carcinogenesis - receptor activation
plop05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125343374
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    125343374
   04668 TNF signaling pathway
    125343374
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    125343374
   04215 Apoptosis - multiple species
    125343374
   04217 Necroptosis
    125343374
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125343374
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    125343374
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125343374
   05207 Chemical carcinogenesis - receptor activation
    125343374
  09162 Cancer: specific types
   05222 Small cell lung cancer
    125343374
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    125343374
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    125343374
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    125343374
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:plop01002]
    125343374
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:plop04121]
    125343374
   03029 Mitochondrial biogenesis [BR:plop03029]
    125343374
Enzymes [BR:plop01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125343374
Peptidases and inhibitors [BR:plop01002]
 Peptidase inhibitors
  Family I32: IAP family
   125343374
Ubiquitin system [BR:plop04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125343374
Mitochondrial biogenesis [BR:plop03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    125343374
SSDB
Motif
Pfam: BIR zf-C3HC4_3 BIRC2-3-like_UBA Prok-RING_4 zf-C3HC4_2 DUF2039
Other DBs
NCBI-GeneID: 125343374
NCBI-ProteinID: XP_048191710
LinkDB
Position
X:complement(21688825..21727676)
AA seq 495 aa
MTFNSFEGSKTCVPADLNKDEEFVEEYNRLKTFANFPSSSPVAASTLARAGFLYTGEGDT
VQCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGFYFESSAAQSSNPGVQNGQYKAENC
LGSRNHFTLDRPETHADYLLRTGQVVDISDTVYPRNPAMCSEEARLKSFHNWPDYAHLTP
RELASAGLYYTGIDDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNINVRSES
DVSSDRNFPNSTHLPRNPAMADYEARIITFGMWIYSVNKEQLARAGFYALGEGDKVKCFH
CGGGLTDWKPSEDPWEQHAKWYPGCKYLLEEKGQEYINNIHLTHSPEESLVRTAEKTPSL
TQRIDDTIFQNPMVQEAIRMGFSFKDIKKIMEEKIQTSGSNYISLEILVADLVNAQKDNI
QDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAVVFIPCGHLVTCKQCAEAVDKCP
MCYTVITFKQKIFMS
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgacgtttaacagttttgaaggatctaaaacttgtgtacctgcagacctcaataaggat
gaagaatttgtagaagaatataatagattaaaaacttttgctaattttccaagcagtagt
cctgtggcagcatctacattggcccgggcaggttttctctatactggtgaaggagacact
gtgcagtgctttagttgccatgcagcagtagatagatggcagtatggagactcagcagtt
ggaagacacaggaaggtatccccaaattgcagatttatcaatggcttttattttgaaagt
agtgcggcccaatcttcaaatcctggtgtccaaaatggtcagtacaaagctgaaaactgt
ctgggaagcagaaatcatttcactctagacaggcctgaaactcatgcagactatcttctg
agaacaggacaggttgtagatatttctgacaccgtatacccaaggaaccctgccatgtgt
agtgaagaagccagattaaagtcatttcacaactggccagactatgctcacttaaccccc
agagagctagctagtgctggactctactacacaggtatagatgatcaagtgcagtgtttt
tgttgtggcggaaaactgaaaaattgggaaccttgtgaccgtgcctggtcagagcaccga
cgacactttcctaattgcttctttgttttgggccgcaatattaatgttcgaagtgagtct
gatgtgagttctgatagaaatttccccaattcaacacatcttccaagaaatccagccatg
gccgattatgaagcacggatcattacttttggaatgtggatctattccgttaacaaggag
caacttgcaagagctggattttatgctttaggtgaaggtgataaagtgaagtgcttccat
tgtggaggagggctaactgattggaagcctagtgaagacccttgggaacaacatgccaag
tggtatccaggctgtaaatatctattggaagaaaagggacaagaatatataaacaatatt
cacttaacccattcacctgaggagtctctggtaagaactgctgaaaaaacaccatcacta
actcaaagaatcgatgatactatcttccagaatcctatggtacaagaagctataagaatg
ggattcagttttaaggatattaagaaaataatggaggaaaaaattcagacatctgggagc
aactatatatcacttgagattctggttgcagatctagtgaatgctcagaaagataatata
caagatgaatctagtcagacttcattgcagaaggaaattagtactgaagagcagctaagg
cgcctgcaagaggagaaactttgcaaaatctgtatggacagaaatattgctgtagttttt
attccttgtggacatctggtcacttgtaaacagtgtgcggaagcagtagacaaatgtccc
atgtgctacacagtcattactttcaagcaaaaaatttttatgtcttaa

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