Perognathus longimembris pacificus (Pacific pocket mouse): 125343374
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Entry
125343374 CDS
T08928
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop01524
Platinum drug resistance
plop04064
NF-kappa B signaling pathway
plop04120
Ubiquitin mediated proteolysis
plop04210
Apoptosis
plop04215
Apoptosis - multiple species
plop04217
Necroptosis
plop04510
Focal adhesion
plop04621
NOD-like receptor signaling pathway
plop04668
TNF signaling pathway
plop05145
Toxoplasmosis
plop05166
Human T-cell leukemia virus 1 infection
plop05200
Pathways in cancer
plop05207
Chemical carcinogenesis - receptor activation
plop05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125343374
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125343374
04668 TNF signaling pathway
125343374
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125343374
04215 Apoptosis - multiple species
125343374
04217 Necroptosis
125343374
09144 Cellular community - eukaryotes
04510 Focal adhesion
125343374
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125343374
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125343374
05207 Chemical carcinogenesis - receptor activation
125343374
09162 Cancer: specific types
05222 Small cell lung cancer
125343374
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
125343374
09174 Infectious disease: parasitic
05145 Toxoplasmosis
125343374
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
125343374
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125343374
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125343374
03029 Mitochondrial biogenesis [BR:
plop03029
]
125343374
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125343374
Peptidases and inhibitors [BR:
plop01002
]
Peptidase inhibitors
Family I32: IAP family
125343374
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125343374
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125343374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
BIRC2-3-like_UBA
Prok-RING_4
zf-C3HC4_2
DUF2039
Motif
Other DBs
NCBI-GeneID:
125343374
NCBI-ProteinID:
XP_048191710
LinkDB
All DBs
Position
X:complement(21688825..21727676)
Genome browser
AA seq
495 aa
AA seq
DB search
MTFNSFEGSKTCVPADLNKDEEFVEEYNRLKTFANFPSSSPVAASTLARAGFLYTGEGDT
VQCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGFYFESSAAQSSNPGVQNGQYKAENC
LGSRNHFTLDRPETHADYLLRTGQVVDISDTVYPRNPAMCSEEARLKSFHNWPDYAHLTP
RELASAGLYYTGIDDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNINVRSES
DVSSDRNFPNSTHLPRNPAMADYEARIITFGMWIYSVNKEQLARAGFYALGEGDKVKCFH
CGGGLTDWKPSEDPWEQHAKWYPGCKYLLEEKGQEYINNIHLTHSPEESLVRTAEKTPSL
TQRIDDTIFQNPMVQEAIRMGFSFKDIKKIMEEKIQTSGSNYISLEILVADLVNAQKDNI
QDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAVVFIPCGHLVTCKQCAEAVDKCP
MCYTVITFKQKIFMS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttaacagttttgaaggatctaaaacttgtgtacctgcagacctcaataaggat
gaagaatttgtagaagaatataatagattaaaaacttttgctaattttccaagcagtagt
cctgtggcagcatctacattggcccgggcaggttttctctatactggtgaaggagacact
gtgcagtgctttagttgccatgcagcagtagatagatggcagtatggagactcagcagtt
ggaagacacaggaaggtatccccaaattgcagatttatcaatggcttttattttgaaagt
agtgcggcccaatcttcaaatcctggtgtccaaaatggtcagtacaaagctgaaaactgt
ctgggaagcagaaatcatttcactctagacaggcctgaaactcatgcagactatcttctg
agaacaggacaggttgtagatatttctgacaccgtatacccaaggaaccctgccatgtgt
agtgaagaagccagattaaagtcatttcacaactggccagactatgctcacttaaccccc
agagagctagctagtgctggactctactacacaggtatagatgatcaagtgcagtgtttt
tgttgtggcggaaaactgaaaaattgggaaccttgtgaccgtgcctggtcagagcaccga
cgacactttcctaattgcttctttgttttgggccgcaatattaatgttcgaagtgagtct
gatgtgagttctgatagaaatttccccaattcaacacatcttccaagaaatccagccatg
gccgattatgaagcacggatcattacttttggaatgtggatctattccgttaacaaggag
caacttgcaagagctggattttatgctttaggtgaaggtgataaagtgaagtgcttccat
tgtggaggagggctaactgattggaagcctagtgaagacccttgggaacaacatgccaag
tggtatccaggctgtaaatatctattggaagaaaagggacaagaatatataaacaatatt
cacttaacccattcacctgaggagtctctggtaagaactgctgaaaaaacaccatcacta
actcaaagaatcgatgatactatcttccagaatcctatggtacaagaagctataagaatg
ggattcagttttaaggatattaagaaaataatggaggaaaaaattcagacatctgggagc
aactatatatcacttgagattctggttgcagatctagtgaatgctcagaaagataatata
caagatgaatctagtcagacttcattgcagaaggaaattagtactgaagagcagctaagg
cgcctgcaagaggagaaactttgcaaaatctgtatggacagaaatattgctgtagttttt
attccttgtggacatctggtcacttgtaaacagtgtgcggaagcagtagacaaatgtccc
atgtgctacacagtcattactttcaagcaaaaaatttttatgtcttaa
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