Perognathus longimembris pacificus (Pacific pocket mouse): 125344249
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Entry
125344249 CDS
T08928
Symbol
Rnf128
Name
(RefSeq) E3 ubiquitin-protein ligase RNF128 isoform X1
KO
K10629
E3 ubiquitin-protein ligase RNF128 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125344249 (Rnf128)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125344249 (Rnf128)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125344249 (Rnf128)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zinc_ribbon_16
zf-C3H2C3
zf-RING_Vps41
PHD
zf_RING_Vps8
zf-Nse
Motif
Other DBs
NCBI-GeneID:
125344249
NCBI-ProteinID:
XP_048192832
LinkDB
All DBs
Position
X:complement(34909856..35009309)
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AA seq
426 aa
AA seq
DB search
MGPGAGVACRGGCGSSRLLAWCFLLALSPHAPASRGAEAVWTAYLNVSWRVPHTGVNRTV
WELSEEGVYGQDSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGNAVQVSWLALIQR
GGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAGDIVAIMIGNLKGTKILHS
IQRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSR
KQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKT
CVDPWLLEHRTCPMCKCDILKALGIEVDVEDGSVSLQVPVSNDASNSASPHEEDNRSETA
SSGYASVQGADEPPLEEHVQSANENLQLVNHEASSVAVDVVPHIDNPTFEEDETPDQETA
VREIKS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggccctggggccggggtcgcttgccgcggcggctgcggctcttcccgcttgctggcc
tggtgtttcttactggctctgagtccccatgcccccgcttcccggggggccgaagcagta
tggaccgcgtacctcaacgtgtcctggagggttccgcacaccggagtgaaccgcaccgtg
tgggagctgagcgaggagggcgtgtatggccaggactcgccgctggagcccgtagctggg
gtcctggtaccacccgacgggcccggggcgctcaacgcgtgtaacccgcacaccaatttc
acagtgcccaccgtgtggggaaacgccgtccaagtctcttggttggcccttatccagcgt
ggcgggggctgcaccttcgcagacaagatccatctggcttatgagagaggggcttctgga
gccgtcatctttaacttcccagggacccgcaatgaggtcatccccatgtctcacccgggt
gcaggagacattgttgcaatcatgattggcaatctgaaaggaacaaaaattctacattct
attcaaagaggcatccaagtaacaatggtcattgaagtagggaaaaaacatggcccttgg
gtgaatcactattcaattttcttcgtttccgtgtcctttttcattattactgcagcaact
gtgggctattttatcttttattctgctcgaagactacggaatgcaagagctcaaagcagg
aagcagagacagttaaaggcagatgctaaaaaagctattggacggcttcagctacgtaca
ttgaaacagggagacaaggaaattggcccagatggagatagttgtgcagtgtgcattgaa
ctatataaaccaaatgatttggtgcgcatcttaacctgcaaccatattttccataagacc
tgtgttgacccatggctgttagaacacaggacttgccccatgtgcaaatgtgacattctc
aaagctttgggaattgaggtggatgttgaagatggatccgtgtctttacaagtccctgta
tccaatgatgcatccaatagtgcatcaccccatgaagaagataaccgcagtgagactgca
tcctctggatatgcttcagttcagggagcagatgaaccacccctggaggaacatgtgcag
tcagcaaatgaaaatctacagctggtaaaccatgaagcaagttccgtggctgtggatgtt
gttcctcatattgacaacccaacttttgaagaagatgaaactcctgatcaagagactgct
gttcgagaaattaaatcgtaa
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